Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1072 and DvMF_1073 are separated by 10 nucleotides DvMF_1073 and DvMF_1074 are separated by 701 nucleotides DvMF_1074 and DvMF_1075 are separated by 70 nucleotides DvMF_1075 and DvMF_1076 are separated by 150 nucleotides
DvMF_1072: DvMF_1072 - hypothetical protein (RefSeq), at 1,311,770 to 1,313,557
_1072
DvMF_1073: DvMF_1073 - hypothetical protein (RefSeq), at 1,313,568 to 1,313,795
_1073
DvMF_1074: DvMF_1074 - hypothetical protein (RefSeq), at 1,314,497 to 1,315,180
_1074
DvMF_1075: DvMF_1075 - hypothetical protein (RefSeq), at 1,315,251 to 1,315,433
_1075
DvMF_1076: DvMF_1076 - dienelactone hydrolase-like protein (RefSeq), at 1,315,584 to 1,317,014
_1076
Position (kb)
1314
1315
1316 Strain fitness (log2 ratio)
-2
-1
0
1 at 1313.542 kb on + strand at 1313.701 kb on + strand, within DvMF_1073 at 1313.709 kb on - strand, within DvMF_1073 at 1313.709 kb on - strand, within DvMF_1073 at 1314.078 kb on + strand at 1314.142 kb on - strand at 1314.152 kb on - strand at 1314.208 kb on + strand at 1314.240 kb on + strand at 1314.240 kb on + strand at 1314.248 kb on - strand at 1314.280 kb on + strand at 1314.288 kb on - strand at 1314.288 kb on - strand at 1314.433 kb on - strand at 1314.745 kb on + strand, within DvMF_1074 at 1315.099 kb on + strand, within DvMF_1074 at 1315.107 kb on - strand, within DvMF_1074 at 1315.394 kb on - strand, within DvMF_1075 at 1315.456 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 1,313,542 + -0.4 1,313,701 + DvMF_1073 0.58 -0.1 1,313,709 - DvMF_1073 0.62 -0.7 1,313,709 - DvMF_1073 0.62 -0.5 1,314,078 + -1.1 1,314,142 - -0.3 1,314,152 - -1.4 1,314,208 + +0.0 1,314,240 + -1.5 1,314,240 + -1.0 1,314,248 - -0.3 1,314,280 + -0.9 1,314,288 - -0.3 1,314,288 - +0.2 1,314,433 - -0.6 1,314,745 + DvMF_1074 0.36 -0.8 1,315,099 + DvMF_1074 0.88 -0.7 1,315,107 - DvMF_1074 0.89 -2.1 1,315,394 - DvMF_1075 0.78 +0.3 1,315,456 + -0.8
Or see this region's nucleotide sequence