Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0844 and DvMF_0845 are separated by 111 nucleotides DvMF_0845 and DvMF_0846 are separated by 13 nucleotides DvMF_0846 and DvMF_0847 are separated by 438 nucleotides DvMF_0847 and DvMF_0848 are separated by 136 nucleotides
DvMF_0844: DvMF_0844 - Sua5/YciO/YrdC/YwlC family protein (RefSeq), at 1,020,483 to 1,021,139
_0844
DvMF_0845: DvMF_0845 - protein of unknown function DUF163 (RefSeq), at 1,021,251 to 1,021,718
_0845
DvMF_0846: DvMF_0846 - hypothetical protein (RefSeq), at 1,021,732 to 1,024,080
_0846
DvMF_0847: DvMF_0847 - hypothetical protein (RefSeq), at 1,024,519 to 1,024,737
_0847
DvMF_0848: DvMF_0848 - glucose inhibited division protein (RefSeq), at 1,024,874 to 1,025,650
_0848
Position (kb) 1021
1022
1023
1024
1025 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1021.210 kb on + strand at 1021.481 kb on + strand, within DvMF_0845 at 1021.489 kb on - strand, within DvMF_0845 at 1021.676 kb on - strand at 1022.071 kb on - strand, within DvMF_0846 at 1023.003 kb on + strand, within DvMF_0846 at 1023.062 kb on - strand, within DvMF_0846 at 1023.113 kb on + strand, within DvMF_0846 at 1023.402 kb on + strand, within DvMF_0846 at 1023.829 kb on + strand, within DvMF_0846 at 1023.841 kb on + strand, within DvMF_0846 at 1023.865 kb on + strand at 1024.200 kb on + strand at 1024.250 kb on - strand at 1024.302 kb on + strand at 1024.312 kb on + strand at 1024.646 kb on - strand, within DvMF_0847 at 1025.018 kb on + strand, within DvMF_0848 at 1025.058 kb on + strand, within DvMF_0848
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 1,021,210 + -0.4 1,021,481 + DvMF_0845 0.49 -0.5 1,021,489 - DvMF_0845 0.51 -0.0 1,021,676 - -0.4 1,022,071 - DvMF_0846 0.14 -4.2 1,023,003 + DvMF_0846 0.54 -3.0 1,023,062 - DvMF_0846 0.57 -3.0 1,023,113 + DvMF_0846 0.59 -3.0 1,023,402 + DvMF_0846 0.71 -2.2 1,023,829 + DvMF_0846 0.89 -2.9 1,023,841 + DvMF_0846 0.90 -1.4 1,023,865 + -2.4 1,024,200 + -0.4 1,024,250 - -0.7 1,024,302 + -0.7 1,024,312 + -1.9 1,024,646 - DvMF_0847 0.58 -0.5 1,025,018 + DvMF_0848 0.19 -0.7 1,025,058 + DvMF_0848 0.24 -1.2
Or see this region's nucleotide sequence