Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0699 and DvMF_0700 are separated by 708 nucleotides DvMF_0700 and DvMF_0701 overlap by 1 nucleotides
DvMF_0699: DvMF_0699 - putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 846,293 to 847,762
_0699
DvMF_0700: DvMF_0700 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 848,471 to 849,817
_0700
DvMF_0701: DvMF_0701 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 849,817 to 851,454
_0701
Position (kb) 848
849
850 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 847.645 kb on + strand at 848.054 kb on - strand at 848.222 kb on - strand at 848.269 kb on + strand at 848.531 kb on - strand at 848.666 kb on + strand, within DvMF_0700 at 848.701 kb on - strand, within DvMF_0700 at 848.706 kb on - strand, within DvMF_0700 at 848.892 kb on - strand, within DvMF_0700 at 848.956 kb on + strand, within DvMF_0700 at 849.042 kb on - strand, within DvMF_0700 at 849.316 kb on + strand, within DvMF_0700 at 849.405 kb on - strand, within DvMF_0700 at 849.614 kb on - strand, within DvMF_0700 at 849.614 kb on - strand, within DvMF_0700 at 849.625 kb on + strand, within DvMF_0700 at 849.730 kb on + strand at 849.749 kb on - strand at 849.917 kb on + strand at 849.951 kb on + strand at 850.123 kb on - strand, within DvMF_0701 at 850.163 kb on + strand, within DvMF_0701 at 850.384 kb on + strand, within DvMF_0701 at 850.669 kb on - strand, within DvMF_0701 at 850.720 kb on + strand, within DvMF_0701
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 847,645 + -0.5 848,054 - +0.0 848,222 - -2.5 848,269 + -0.3 848,531 - +0.3 848,666 + DvMF_0700 0.14 -0.4 848,701 - DvMF_0700 0.17 -0.5 848,706 - DvMF_0700 0.17 +0.3 848,892 - DvMF_0700 0.31 -0.2 848,956 + DvMF_0700 0.36 -0.7 849,042 - DvMF_0700 0.42 +1.0 849,316 + DvMF_0700 0.63 +0.4 849,405 - DvMF_0700 0.69 +0.2 849,614 - DvMF_0700 0.85 -0.1 849,614 - DvMF_0700 0.85 +1.2 849,625 + DvMF_0700 0.86 +0.3 849,730 + +0.1 849,749 - -0.0 849,917 + -2.9 849,951 + -0.9 850,123 - DvMF_0701 0.19 -0.5 850,163 + DvMF_0701 0.21 -0.3 850,384 + DvMF_0701 0.35 -0.3 850,669 - DvMF_0701 0.52 -0.4 850,720 + DvMF_0701 0.55 -0.6
Or see this region's nucleotide sequence