Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0358 and DvMF_0359 are separated by 44 nucleotides DvMF_0359 and DvMF_0360 are separated by 587 nucleotides
DvMF_0358: DvMF_0358 - CBS domain containing protein (RefSeq), at 418,298 to 421,531
_0358
DvMF_0359: DvMF_0359 - tyrosine recombinase XerD (RefSeq), at 421,576 to 422,448
_0359
DvMF_0360: DvMF_0360 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 423,036 to 424,775
_0360
Position (kb) 421
422
423 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 420.647 kb on - strand, within DvMF_0358 at 420.704 kb on - strand, within DvMF_0358 at 420.751 kb on - strand, within DvMF_0358 at 420.772 kb on + strand, within DvMF_0358 at 420.791 kb on - strand, within DvMF_0358 at 420.808 kb on - strand, within DvMF_0358 at 420.923 kb on - strand, within DvMF_0358 at 420.961 kb on + strand, within DvMF_0358 at 421.223 kb on - strand at 421.223 kb on - strand at 421.252 kb on - strand at 421.352 kb on + strand at 421.436 kb on - strand at 421.472 kb on - strand at 421.582 kb on - strand at 421.591 kb on + strand at 421.632 kb on + strand at 421.706 kb on - strand, within DvMF_0359 at 421.809 kb on - strand, within DvMF_0359 at 421.939 kb on - strand, within DvMF_0359 at 422.016 kb on + strand, within DvMF_0359 at 422.096 kb on + strand, within DvMF_0359 at 422.099 kb on - strand, within DvMF_0359 at 422.101 kb on + strand, within DvMF_0359 at 422.336 kb on + strand, within DvMF_0359 at 422.783 kb on + strand at 423.044 kb on + strand at 423.109 kb on + strand at 423.117 kb on - strand at 423.408 kb on + strand, within DvMF_0360
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 420,647 - DvMF_0358 0.73 +1.1 420,704 - DvMF_0358 0.74 -0.8 420,751 - DvMF_0358 0.76 -0.2 420,772 + DvMF_0358 0.76 -0.4 420,791 - DvMF_0358 0.77 -0.3 420,808 - DvMF_0358 0.78 -0.1 420,923 - DvMF_0358 0.81 -0.1 420,961 + DvMF_0358 0.82 -0.9 421,223 - +0.0 421,223 - -0.1 421,252 - -0.1 421,352 + -0.2 421,436 - -0.5 421,472 - -0.2 421,582 - +0.2 421,591 + -1.3 421,632 + -0.9 421,706 - DvMF_0359 0.15 -1.8 421,809 - DvMF_0359 0.27 -2.3 421,939 - DvMF_0359 0.42 -2.1 422,016 + DvMF_0359 0.50 -2.8 422,096 + DvMF_0359 0.60 -1.9 422,099 - DvMF_0359 0.60 -2.0 422,101 + DvMF_0359 0.60 -3.2 422,336 + DvMF_0359 0.87 -3.1 422,783 + -0.4 423,044 + -0.3 423,109 + -0.6 423,117 - +1.2 423,408 + DvMF_0360 0.21 +0.7
Or see this region's nucleotide sequence