Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0330 and DvMF_0331 are separated by 1 nucleotides DvMF_0331 and DvMF_0332 are separated by 5 nucleotides
DvMF_0330: DvMF_0330 - iron-containing alcohol dehydrogenase (RefSeq), at 384,682 to 385,824
_0330
DvMF_0331: DvMF_0331 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 385,826 to 387,151
_0331
DvMF_0332: DvMF_0332 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 387,157 to 388,566
_0332
Position (kb) 385
386
387
388 Strain fitness (log2 ratio) -1
0
1 at 384.930 kb on - strand, within DvMF_0330 at 384.949 kb on - strand, within DvMF_0330 at 385.416 kb on - strand, within DvMF_0330 at 385.498 kb on + strand, within DvMF_0330 at 385.508 kb on + strand, within DvMF_0330 at 385.635 kb on + strand, within DvMF_0330 at 385.823 kb on - strand at 386.104 kb on + strand, within DvMF_0331 at 386.495 kb on - strand, within DvMF_0331 at 386.600 kb on - strand, within DvMF_0331 at 386.606 kb on - strand, within DvMF_0331 at 386.606 kb on - strand, within DvMF_0331 at 386.618 kb on + strand, within DvMF_0331 at 386.663 kb on - strand, within DvMF_0331 at 386.689 kb on + strand, within DvMF_0331 at 386.773 kb on + strand, within DvMF_0331 at 386.785 kb on + strand, within DvMF_0331 at 386.788 kb on - strand, within DvMF_0331 at 386.822 kb on - strand, within DvMF_0331 at 386.846 kb on + strand, within DvMF_0331 at 386.883 kb on + strand, within DvMF_0331 at 387.153 kb on - strand at 387.299 kb on + strand, within DvMF_0332 at 387.433 kb on - strand, within DvMF_0332 at 387.505 kb on - strand, within DvMF_0332 at 387.616 kb on - strand, within DvMF_0332 at 387.695 kb on - strand, within DvMF_0332 at 387.798 kb on + strand, within DvMF_0332
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 384,930 - DvMF_0330 0.22 -0.6 384,949 - DvMF_0330 0.23 -0.1 385,416 - DvMF_0330 0.64 -0.6 385,498 + DvMF_0330 0.71 +0.1 385,508 + DvMF_0330 0.72 -0.2 385,635 + DvMF_0330 0.83 -0.0 385,823 - -0.1 386,104 + DvMF_0331 0.21 -0.3 386,495 - DvMF_0331 0.50 -0.4 386,600 - DvMF_0331 0.58 -0.2 386,606 - DvMF_0331 0.59 -1.6 386,606 - DvMF_0331 0.59 -0.4 386,618 + DvMF_0331 0.60 -0.4 386,663 - DvMF_0331 0.63 -0.1 386,689 + DvMF_0331 0.65 -0.2 386,773 + DvMF_0331 0.71 +0.2 386,785 + DvMF_0331 0.72 -0.7 386,788 - DvMF_0331 0.73 -0.1 386,822 - DvMF_0331 0.75 -0.6 386,846 + DvMF_0331 0.77 -0.3 386,883 + DvMF_0331 0.80 -0.5 387,153 - -0.2 387,299 + DvMF_0332 0.10 -0.3 387,433 - DvMF_0332 0.20 +0.8 387,505 - DvMF_0332 0.25 -0.3 387,616 - DvMF_0332 0.33 +0.5 387,695 - DvMF_0332 0.38 -0.3 387,798 + DvMF_0332 0.45 -0.6
Or see this region's nucleotide sequence