Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0309
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 356,124 | + | DvMF_0308 | 0.50 | +1.3 | |
| 356,280 | - | DvMF_0308 | 0.61 | -1.8 | |
| 357,006 | - | -1.3 | |||
| 357,011 | - | -0.5 | |||
| 357,308 | + | rpsA | DvMF_0309 | 0.11 | -2.0 |
| 357,316 | - | rpsA | DvMF_0309 | 0.11 | -2.1 |
| 357,431 | - | rpsA | DvMF_0309 | 0.18 | -0.2 |
| 357,433 | + | rpsA | DvMF_0309 | 0.18 | -1.1 |
| 357,447 | - | rpsA | DvMF_0309 | 0.19 | -1.6 |
| 357,482 | - | rpsA | DvMF_0309 | 0.21 | -1.2 |
| 357,629 | - | rpsA | DvMF_0309 | 0.30 | -2.3 |
| 357,689 | - | rpsA | DvMF_0309 | 0.33 | -2.0 |
| 358,084 | - | rpsA | DvMF_0309 | 0.57 | -2.2 |
| 358,532 | + | rpsA | DvMF_0309 | 0.83 | -1.6 |
| 358,532 | + | rpsA | DvMF_0309 | 0.83 | -2.0 |
| 359,334 | + | -0.5 | |||
| 359,561 | + | -0.2 | |||
| 359,697 | + | DvMF_0311 | 0.17 | -0.5 | |
| 359,810 | + | DvMF_0311 | 0.44 | -0.0 |
Or see this region's nucleotide sequence