Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0449 and Shewana3_0450 are separated by 333 nucleotides Shewana3_0450 and Shewana3_0451 are separated by 84 nucleotides
Shewana3_0449: Shewana3_0449 - diguanylate cyclase with GAF sensor (RefSeq), at 524,652 to 525,695
_0449
Shewana3_0450: Shewana3_0450 - no description, at 526,029 to 526,265
_0450
Shewana3_0451: Shewana3_0451 - anion transporter (RefSeq), at 526,350 to 527,750
_0451
Position (kb) 526
527 Strain fitness (log2 ratio) -1
0
1 at 525.085 kb on + strand, within Shewana3_0449 at 525.271 kb on + strand, within Shewana3_0449 at 525.327 kb on + strand, within Shewana3_0449 at 525.368 kb on - strand, within Shewana3_0449 at 525.393 kb on + strand, within Shewana3_0449 at 525.425 kb on + strand, within Shewana3_0449 at 525.516 kb on + strand, within Shewana3_0449 at 525.527 kb on + strand, within Shewana3_0449 at 525.549 kb on - strand, within Shewana3_0449 at 525.657 kb on - strand at 525.668 kb on + strand at 525.705 kb on + strand at 525.712 kb on + strand at 526.090 kb on + strand, within Shewana3_0450 at 526.463 kb on + strand at 526.471 kb on - strand at 526.508 kb on - strand, within Shewana3_0451 at 526.517 kb on - strand, within Shewana3_0451 at 526.542 kb on - strand, within Shewana3_0451 at 526.594 kb on + strand, within Shewana3_0451 at 526.875 kb on + strand, within Shewana3_0451 at 527.201 kb on + strand, within Shewana3_0451
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 525,085 + Shewana3_0449 0.41 +0.6 525,271 + Shewana3_0449 0.59 +0.6 525,327 + Shewana3_0449 0.65 -0.5 525,368 - Shewana3_0449 0.69 -0.1 525,393 + Shewana3_0449 0.71 -0.2 525,425 + Shewana3_0449 0.74 +0.7 525,516 + Shewana3_0449 0.83 +0.3 525,527 + Shewana3_0449 0.84 +0.7 525,549 - Shewana3_0449 0.86 +0.1 525,657 - +0.5 525,668 + +0.4 525,705 + +1.3 525,712 + +0.1 526,090 + Shewana3_0450 0.26 -1.0 526,463 + -0.9 526,471 - -0.1 526,508 - Shewana3_0451 0.11 +0.4 526,517 - Shewana3_0451 0.12 +0.5 526,542 - Shewana3_0451 0.14 +0.3 526,594 + Shewana3_0451 0.17 -0.3 526,875 + Shewana3_0451 0.37 -0.6 527,201 + Shewana3_0451 0.61 -0.5
Or see this region's nucleotide sequence