Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2784

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,451,611	+				-2.0
3,451,612	-				-1.4
3,451,623	+				-0.0
3,451,624	-				+0.9
3,451,642	-				+0.9
3,451,643	+				-2.4
3,451,643	+				-2.3
3,451,643	+				-0.4
3,451,643	+				+1.7
3,451,643	+				-0.5
3,451,644	-				+2.3
3,451,695	+				-1.5
3,451,736	-				-1.4
3,451,765	+				-2.3
3,451,765	+				-1.7
3,451,766	-				-0.8
3,451,796	+				+1.6
3,451,796	+				+1.6
3,451,804	+				+0.6
3,451,804	+				-2.4
3,451,805	-		BT2783	0.10	+2.5
3,451,805	-		BT2783	0.10	-2.7
3,451,805	-		BT2783	0.10	-2.1
3,451,830	-		BT2783	0.14	+1.0
3,451,832	+		BT2783	0.15	+0.4
3,451,833	-		BT2783	0.15	-1.2
3,451,833	-		BT2783	0.15	+0.5
3,451,840	-		BT2783	0.16	-1.4
3,451,859	+		BT2783	0.19	-1.9
3,451,860	-		BT2783	0.20	-1.2
3,451,863	+		BT2783	0.20	-1.0
3,451,863	+		BT2783	0.20	-2.5
3,451,864	-		BT2783	0.20	-0.4
3,451,864	-		BT2783	0.20	+2.1
3,451,887	+		BT2783	0.24	-1.5
3,451,908	+		BT2783	0.28	-0.5
3,451,908	+		BT2783	0.28	+1.0
3,452,076	+		BT2783	0.57	+0.4
3,452,189	-		BT2783	0.77	-1.0
3,452,190	+		BT2783	0.77	-1.4
3,452,200	-		BT2783	0.79	-1.9
3,452,259	+		BT2783	0.89	-1.7
3,452,260	-		BT2783	0.89	+0.2
3,452,263	+		BT2783	0.90	-0.4
3,452,272	-				+0.6
3,452,289	+				-2.5
3,452,311	-				-0.3
3,452,362	+				-1.4
3,452,419	-				+0.9
3,452,433	-				-0.1
3,452,473	+				-1.6
3,452,474	-				+1.2
3,452,474	-				+0.5
3,452,475	+				+0.7
3,452,476	-				+2.1
3,452,476	-				-1.4
3,452,478	-				-1.1
3,452,478	-				-0.3
3,452,478	-				+0.2
3,452,495	+				-2.4
3,452,500	-				-1.1
3,452,551	-				-2.2
3,452,561	+				-0.6
3,452,561	+				-1.6
3,452,562	-				+2.0
3,452,571	+				-0.9
3,452,584	+				+0.7
3,452,593	+				-2.7
3,452,620	+				-1.9
3,452,621	-				-0.9
3,452,623	+				+0.6
3,452,623	+				-1.9
3,452,641	-				+0.3
3,452,643	+				-2.2
3,452,646	+				+0.6
3,452,649	+				+1.9
3,452,650	-				+0.2
3,452,680	+				-1.9
3,452,701	+		BT2784	0.12	-0.9
3,452,706	+		BT2784	0.13	-0.1
3,452,707	-		BT2784	0.13	+0.9
3,452,790	+		BT2784	0.23	-0.4
3,452,790	+		BT2784	0.23	-1.7
3,452,804	+		BT2784	0.24	-1.1
3,452,806	+		BT2784	0.24	-2.5
3,452,826	+		BT2784	0.27	-1.1
3,452,839	-		BT2784	0.28	-2.9
3,452,858	+		BT2784	0.30	-1.6
3,452,858	+		BT2784	0.30	-2.4
3,452,900	-		BT2784	0.35	-0.1
3,452,900	-		BT2784	0.35	-3.0
3,452,913	-		BT2784	0.37	+1.3
3,452,958	-		BT2784	0.42	-1.4
3,453,011	+		BT2784	0.48	-1.7
3,453,014	-		BT2784	0.48	+0.1
3,453,014	-		BT2784	0.48	-0.3
3,453,043	-		BT2784	0.52	-2.5
3,453,060	-		BT2784	0.54	-1.7
3,453,153	-		BT2784	0.64	-0.7
3,453,210	+		BT2784	0.71	-1.7
3,453,211	-		BT2784	0.71	-0.7
3,453,218	-		BT2784	0.72	-0.1
3,453,218	-		BT2784	0.72	+1.6
3,453,231	-		BT2784	0.73	-3.0
3,453,260	+		BT2784	0.77	+1.1
3,453,261	-		BT2784	0.77	-0.5
3,453,261	-		BT2784	0.77	-2.0
3,453,275	-		BT2784	0.78	-2.7
3,453,287	-		BT2784	0.80	-1.5
3,453,309	-		BT2784	0.82	-0.6
3,453,403	+				-1.3
3,453,404	-				+1.8
3,453,404	-				-1.4
3,453,419	-				-0.9
3,453,420	+				+0.9
3,453,421	-				+0.3
3,453,425	-				-0.1
3,453,425	-				+0.9
3,453,485	+				-1.5
3,453,494	+				-1.7
3,453,495	-				-0.8
3,453,515	+				+0.9
3,453,522	+				-0.2
3,453,607	+				+0.7
3,453,652	+				-0.8
3,453,653	-				-0.7
3,453,669	-				-1.1
3,453,674	-				-2.8
3,453,674	-				+1.3
3,453,674	-				+0.0
3,453,676	-				-3.6
3,453,682	+				-1.4
3,453,686	+				+0.9
3,453,686	+				+0.9
3,453,687	-				+1.3
3,453,687	-				-1.8
3,453,711	+				-0.3
3,453,720	+				-1.3
3,453,721	-				-1.2
3,453,721	-				+0.0
3,453,721	-				+0.1
3,453,734	-				-1.7
3,453,743	+		BT2785	0.10	-0.7
3,453,747	-		BT2785	0.10	+0.6
3,453,747	-		BT2785	0.10	+1.0
3,453,762	+		BT2785	0.11	-0.7
3,453,782	+		BT2785	0.12	+0.2
3,453,909	+		BT2785	0.16	-1.2
3,453,920	+		BT2785	0.17	-0.7
3,453,920	+		BT2785	0.17	+1.0
3,453,921	-		BT2785	0.17	-0.2
3,453,921	-		BT2785	0.17	+2.2
3,453,922	+		BT2785	0.17	+1.4
3,453,925	-		BT2785	0.17	-0.1
3,454,098	+		BT2785	0.24	+1.3
3,454,098	+		BT2785	0.24	+1.0
3,454,099	-		BT2785	0.24	+2.5
3,454,115	+		BT2785	0.24	-0.9
3,454,115	+		BT2785	0.24	-1.7
3,454,151	+		BT2785	0.26	+2.5
3,454,152	-		BT2785	0.26	+1.3
3,454,167	+		BT2785	0.26	-1.5
3,454,168	-		BT2785	0.26	+0.3
3,454,197	+		BT2785	0.27	-1.9
3,454,197	+		BT2785	0.27	-0.1
3,454,197	+		BT2785	0.27	-2.0
3,454,198	-		BT2785	0.27	-1.0
3,454,201	+		BT2785	0.28	-0.6
3,454,201	+		BT2785	0.28	-1.7
3,454,202	-		BT2785	0.28	+1.1
3,454,240	+		BT2785	0.29	-1.4
3,454,292	-		BT2785	0.31	-0.5
3,454,292	-		BT2785	0.31	-2.9
3,454,298	+		BT2785	0.31	-0.5
3,454,325	+		BT2785	0.32	+1.4
3,454,325	+		BT2785	0.32	+0.4
3,454,376	+		BT2785	0.34	+0.0
3,454,382	+		BT2785	0.34	+0.2
3,454,408	+		BT2785	0.35	-0.1
3,454,408	+		BT2785	0.35	-2.4
3,454,408	+		BT2785	0.35	-2.2
3,454,408	+		BT2785	0.35	+2.8
3,454,419	-		BT2785	0.36	-1.9
3,454,439	+		BT2785	0.37	-0.0
3,454,439	+		BT2785	0.37	-0.4
3,454,439	+		BT2785	0.37	+0.1
3,454,439	+		BT2785	0.37	+0.2
3,454,441	+		BT2785	0.37	+0.5
3,454,441	+		BT2785	0.37	+0.1
3,454,441	+		BT2785	0.37	-0.1
3,454,442	-		BT2785	0.37	-1.5
3,454,442	-		BT2785	0.37	-3.5