Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2281

Experiment: Light Dark first sampling rep2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Light Dark first sampling rep2
2,349,202	+				-0.2
2,349,202	+				-0.4
2,349,205	-				+0.3
2,349,216	+				+0.0
2,349,266	-				+0.2
2,349,340	+		Synpcc7942_2280	0.11	+0.3
2,349,345	+		Synpcc7942_2280	0.12	-0.3
2,349,386	+		Synpcc7942_2280	0.16	+0.0
2,349,420	-		Synpcc7942_2280	0.20	+0.4
2,349,445	-		Synpcc7942_2280	0.23	+0.5
2,349,452	+		Synpcc7942_2280	0.23	+0.3
2,349,457	+		Synpcc7942_2280	0.24	+1.0
2,349,457	+		Synpcc7942_2280	0.24	+0.2
2,349,457	+		Synpcc7942_2280	0.24	+0.4
2,349,465	-		Synpcc7942_2280	0.25	-1.2
2,349,465	-		Synpcc7942_2280	0.25	+1.0
2,349,465	-		Synpcc7942_2280	0.25	+0.5
2,349,496	+		Synpcc7942_2280	0.28	+0.0
2,349,507	+		Synpcc7942_2280	0.29	+0.4
2,349,512	+		Synpcc7942_2280	0.30	+0.4
2,349,512	+		Synpcc7942_2280	0.30	-0.0
2,349,518	+		Synpcc7942_2280	0.30	+0.3
2,349,520	-		Synpcc7942_2280	0.31	+0.2
2,349,520	-		Synpcc7942_2280	0.31	-0.3
2,349,520	-		Synpcc7942_2280	0.31	+1.4
2,349,520	-		Synpcc7942_2280	0.31	-0.1
2,349,520	-		Synpcc7942_2280	0.31	-0.0
2,349,520	-		Synpcc7942_2280	0.31	+0.4
2,349,520	-		Synpcc7942_2280	0.31	+0.5
2,349,536	-		Synpcc7942_2280	0.32	-0.3
2,349,537	-		Synpcc7942_2280	0.32	-0.0
2,349,542	-		Synpcc7942_2280	0.33	-0.3
2,349,636	+		Synpcc7942_2280	0.43	-0.8
2,349,651	+		Synpcc7942_2280	0.45	-0.8
2,349,694	+		Synpcc7942_2280	0.49	-0.2
2,349,702	-		Synpcc7942_2280	0.50	-2.0
2,349,736	-		Synpcc7942_2280	0.54	+0.4
2,349,736	-		Synpcc7942_2280	0.54	+0.3
2,349,741	-		Synpcc7942_2280	0.54	+0.0
2,349,770	+		Synpcc7942_2280	0.57	+0.1
2,349,788	+		Synpcc7942_2280	0.59	+0.0
2,349,798	+		Synpcc7942_2280	0.60	+0.5
2,349,803	+		Synpcc7942_2280	0.61	+0.5
2,349,805	-		Synpcc7942_2280	0.61	+0.4
2,349,825	+		Synpcc7942_2280	0.63	+0.4
2,349,833	-		Synpcc7942_2280	0.64	+0.6
2,349,844	-		Synpcc7942_2280	0.65	+0.1
2,349,858	-		Synpcc7942_2280	0.67	+0.0
2,349,876	-		Synpcc7942_2280	0.69	+0.2
2,349,880	+		Synpcc7942_2280	0.69	+0.8
2,349,880	+		Synpcc7942_2280	0.69	+0.1
2,349,880	+		Synpcc7942_2280	0.69	-0.6
2,349,888	-		Synpcc7942_2280	0.70	-0.1
2,349,888	-		Synpcc7942_2280	0.70	+0.2
2,349,892	+		Synpcc7942_2280	0.70	+0.9
2,349,898	-		Synpcc7942_2280	0.71	-0.2
2,349,898	-		Synpcc7942_2280	0.71	+0.3
2,349,898	-		Synpcc7942_2280	0.71	+0.9
2,349,898	-		Synpcc7942_2280	0.71	+1.4
2,349,898	-		Synpcc7942_2280	0.71	+0.0
2,349,898	-		Synpcc7942_2280	0.71	-0.4
2,349,907	-		Synpcc7942_2280	0.72	+0.6
2,349,958	+		Synpcc7942_2280	0.77	-0.3
2,349,972	-		Synpcc7942_2280	0.79	+2.2
2,349,976	+		Synpcc7942_2280	0.79	-0.3
2,349,997	-		Synpcc7942_2280	0.82	+0.4
2,350,001	-		Synpcc7942_2280	0.82	-0.3
2,350,057	+		Synpcc7942_2280	0.88	-0.2
2,350,062	+		Synpcc7942_2280	0.89	+0.5
2,350,082	+				+1.4
2,350,090	-				-0.4
2,350,141	+				-0.1
2,350,143	+				+0.4
2,350,151	-				-0.3
2,350,151	-				+0.0
2,350,153	+				+2.3
2,350,201	+				+0.9
2,350,209	-				+0.0
2,350,212	+				+0.9
2,350,234	+				+1.0
2,350,252	-				-0.4
2,350,273	+				+2.0
2,350,279	+				+0.3
2,350,279	+				-0.3
2,350,286	+				-1.8
2,350,321	+		Synpcc7942_2281	0.13	-0.6
2,350,334	-		Synpcc7942_2281	0.14	+0.2
2,350,354	+		Synpcc7942_2281	0.16	-1.4
2,350,372	+		Synpcc7942_2281	0.18	-1.1
2,350,372	+		Synpcc7942_2281	0.18	-3.0
2,350,380	-		Synpcc7942_2281	0.19	-0.7
2,350,380	-		Synpcc7942_2281	0.19	-1.2
2,350,380	-		Synpcc7942_2281	0.19	-1.7
2,350,472	+		Synpcc7942_2281	0.29	-2.3
2,350,474	-		Synpcc7942_2281	0.29	+0.3
2,350,475	-		Synpcc7942_2281	0.29	-0.5
2,350,482	+		Synpcc7942_2281	0.30	-2.2
2,350,492	+		Synpcc7942_2281	0.31	-2.2
2,350,500	-		Synpcc7942_2281	0.32	-0.2
2,350,528	+		Synpcc7942_2281	0.34	-1.0
2,350,536	+				-1.0
2,350,544	-		Synpcc7942_2281	0.36	-0.4
2,350,544	-		Synpcc7942_2281	0.36	-0.4
2,350,546	+		Synpcc7942_2281	0.36	-0.8
2,350,546	+		Synpcc7942_2281	0.36	-1.5
2,350,573	+		Synpcc7942_2281	0.39	-2.2
2,350,606	-		Synpcc7942_2281	0.43	-1.6
2,350,618	-		Synpcc7942_2281	0.44	-0.4
2,350,739	+		Synpcc7942_2281	0.57	-1.5
2,350,759	-		Synpcc7942_2281	0.59	-1.7
2,350,764	+		Synpcc7942_2281	0.59	+0.6
2,350,820	+		Synpcc7942_2281	0.65	-0.8
2,350,832	+		Synpcc7942_2281	0.66	+0.0
2,350,880	-		Synpcc7942_2281	0.71	-1.0
2,350,928	+		Synpcc7942_2281	0.76	-1.1
2,350,960	+		Synpcc7942_2281	0.80	-1.2
2,350,960	+		Synpcc7942_2281	0.80	+0.6
2,351,001	+		Synpcc7942_2281	0.84	+0.8
2,351,022	+		Synpcc7942_2281	0.86	-1.5
2,351,027	+		Synpcc7942_2281	0.87	-0.4
2,351,027	+		Synpcc7942_2281	0.87	-0.4
2,351,035	-		Synpcc7942_2281	0.87	-0.0
2,351,100	+				+0.3
2,351,108	-				-1.8
2,351,108	-				+0.2
2,351,108	-				-0.7
2,351,182	+				+0.2
2,351,190	-				+0.2
2,351,191	-				-1.0
2,351,193	+				+1.2
2,351,193	+				-1.2
2,351,193	+				-0.7
2,351,193	+				+0.3
2,351,201	-				+0.7
2,351,201	-				-1.0
2,351,201	-				+0.4
2,351,204	-				+0.1
2,351,243	+				+0.6
2,351,243	+				+0.3
2,351,243	+				-1.4
2,351,251	-				+0.3
2,351,251	-				+0.2
2,351,308	-		Synpcc7942_2282	0.11	+1.0
2,351,367	+		Synpcc7942_2282	0.14	-1.0
2,351,430	+		Synpcc7942_2282	0.17	+0.0
2,351,435	+		Synpcc7942_2282	0.17	-0.5
2,351,443	+		Synpcc7942_2282	0.18	+0.0
2,351,443	+		Synpcc7942_2282	0.18	+0.6
2,351,506	+		Synpcc7942_2282	0.21	-1.5
2,351,517	+		Synpcc7942_2282	0.22	-0.1
2,351,517	+		Synpcc7942_2282	0.22	+0.1
2,351,547	-		Synpcc7942_2282	0.23	-0.2
2,351,656	+		Synpcc7942_2282	0.29	+0.3
2,351,696	+		Synpcc7942_2282	0.31	-0.6
2,351,721	-		Synpcc7942_2282	0.32	-0.3
2,351,766	+		Synpcc7942_2282	0.35	-0.3
2,351,766	+		Synpcc7942_2282	0.35	+0.9
2,351,766	+		Synpcc7942_2282	0.35	-0.4
2,351,766	+		Synpcc7942_2282	0.35	+0.1
2,351,766	+		Synpcc7942_2282	0.35	-0.1
2,351,766	+		Synpcc7942_2282	0.35	+0.2
2,351,774	-		Synpcc7942_2282	0.35	-0.2
2,351,774	-		Synpcc7942_2282	0.35	+0.5
2,351,778	-		Synpcc7942_2282	0.35	+0.3
2,351,814	+		Synpcc7942_2282	0.37	+0.5
2,351,842	+		Synpcc7942_2282	0.39	-0.5
2,351,850	+		Synpcc7942_2282	0.39	-0.6
2,351,850	+		Synpcc7942_2282	0.39	-0.2
2,351,856	+		Synpcc7942_2282	0.39	+0.0
2,351,874	-		Synpcc7942_2282	0.40	-0.3
2,351,876	+		Synpcc7942_2282	0.40	+0.2
2,351,919	+		Synpcc7942_2282	0.43	+0.2
2,351,927	-		Synpcc7942_2282	0.43	-0.1
2,351,940	+		Synpcc7942_2282	0.44	-0.8
2,351,956	-		Synpcc7942_2282	0.45	-0.0
2,351,956	-		Synpcc7942_2282	0.45	-0.6
2,351,961	-		Synpcc7942_2282	0.45	+1.0
2,351,963	+		Synpcc7942_2282	0.45	+0.1
2,351,968	+		Synpcc7942_2282	0.45	+0.2
2,351,988	+		Synpcc7942_2282	0.46	+0.3
2,352,011	+		Synpcc7942_2282	0.47	+0.4
2,352,036	+		Synpcc7942_2282	0.49	-0.3
2,352,038	-		Synpcc7942_2282	0.49	+1.1
2,352,076	-		Synpcc7942_2282	0.51	+0.0
2,352,102	+		Synpcc7942_2282	0.52	-0.4
2,352,111	+		Synpcc7942_2282	0.53	+0.0
2,352,112	-		Synpcc7942_2282	0.53	-0.6
2,352,119	+		Synpcc7942_2282	0.53	-0.3
2,352,129	+		Synpcc7942_2282	0.54	-0.0
2,352,129	+		Synpcc7942_2282	0.54	-0.0
2,352,137	-		Synpcc7942_2282	0.54	-0.4
2,352,137	-		Synpcc7942_2282	0.54	+0.4