Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1367

Experiment: Light Dark first sampling rep2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Light Dark first sampling rep2
1,404,299	-				-0.2
1,405,174	-				+0.2
1,405,186	+				-0.2
1,405,198	+				+0.6
1,405,204	-				+0.1
1,405,234	+				+1.1
1,405,244	+				+0.1
1,405,246	+				+0.7
1,405,267	+				+0.7
1,405,269	+				+0.4
1,405,269	+				+0.1
1,405,269	+				+0.1
1,405,269	+				+0.5
1,405,269	+				+0.3
1,405,269	+				-0.7
1,405,269	+				+2.0
1,405,275	-				+0.1
1,405,277	-				+0.2
1,405,277	-				-2.8
1,405,277	-				+0.1
1,405,277	-				+0.5
1,405,277	-				+0.2
1,405,277	-				-0.4
1,405,277	-				+0.3
1,405,277	-				-1.8
1,405,294	+				-0.0
1,405,294	+				+0.0
1,405,302	-				+0.7
1,405,302	-				+0.2
1,405,310	-				+1.3
1,405,371	+				+0.2
1,405,462	+		Synpcc7942_1367	0.15	+0.6
1,405,495	+		Synpcc7942_1367	0.17	+0.5
1,405,497	-		Synpcc7942_1367	0.17	+0.9
1,405,497	-		Synpcc7942_1367	0.17	+0.1
1,405,509	-		Synpcc7942_1367	0.18	-0.6
1,405,559	+		Synpcc7942_1367	0.22	+1.1
1,405,569	-		Synpcc7942_1367	0.22	+0.4
1,405,573	+		Synpcc7942_1367	0.23	+0.9
1,405,589	+		Synpcc7942_1367	0.24	-0.2
1,405,608	+		Synpcc7942_1367	0.25	-0.0
1,405,625	-		Synpcc7942_1367	0.27	-0.7
1,405,653	+		Synpcc7942_1367	0.29	+0.5
1,405,657	+				+0.9
1,405,660	-		Synpcc7942_1367	0.29	+0.2
1,405,759	-		Synpcc7942_1367	0.36	-0.1
1,405,795	+		Synpcc7942_1367	0.39	-0.4
1,405,795	+		Synpcc7942_1367	0.39	-0.2
1,405,795	+		Synpcc7942_1367	0.39	-0.0
1,405,796	-		Synpcc7942_1367	0.39	+1.2
1,405,801	-		Synpcc7942_1367	0.39	-0.5
1,405,803	-		Synpcc7942_1367	0.40	-0.1
1,405,803	-		Synpcc7942_1367	0.40	+0.5
1,405,803	-		Synpcc7942_1367	0.40	+0.9
1,405,803	-		Synpcc7942_1367	0.40	+0.1
1,405,803	-		Synpcc7942_1367	0.40	+0.3
1,405,803	-		Synpcc7942_1367	0.40	-0.2
1,405,803	-		Synpcc7942_1367	0.40	-0.2
1,405,803	-		Synpcc7942_1367	0.40	+0.4
1,405,813	-		Synpcc7942_1367	0.40	-0.1
1,405,821	-		Synpcc7942_1367	0.41	+0.0
1,405,826	-				-0.7
1,405,853	-		Synpcc7942_1367	0.43	+1.0
1,405,902	-		Synpcc7942_1367	0.47	-0.4
1,405,902	-		Synpcc7942_1367	0.47	+0.4
1,405,905	-		Synpcc7942_1367	0.47	+0.9
1,405,949	-		Synpcc7942_1367	0.50	-0.3
1,405,983	-		Synpcc7942_1367	0.53	+1.0
1,405,998	-		Synpcc7942_1367	0.54	+0.6
1,406,001	+		Synpcc7942_1367	0.54	-0.2
1,406,001	+		Synpcc7942_1367	0.54	+0.5
1,406,006	+		Synpcc7942_1367	0.54	+0.4
1,406,020	+		Synpcc7942_1367	0.55	-0.4
1,406,027	+		Synpcc7942_1367	0.56	-0.0
1,406,028	-		Synpcc7942_1367	0.56	+0.7
1,406,029	-		Synpcc7942_1367	0.56	-0.1
1,406,032	+		Synpcc7942_1367	0.56	-0.6
1,406,035	-		Synpcc7942_1367	0.57	+0.2
1,406,042	+		Synpcc7942_1367	0.57	+0.4
1,406,063	+		Synpcc7942_1367	0.59	-0.4
1,406,063	+		Synpcc7942_1367	0.59	+0.6
1,406,063	+		Synpcc7942_1367	0.59	+0.4
1,406,068	+		Synpcc7942_1367	0.59	+0.4
1,406,068	+		Synpcc7942_1367	0.59	-0.2
1,406,068	+		Synpcc7942_1367	0.59	+0.7
1,406,071	-		Synpcc7942_1367	0.59	+0.3
1,406,071	-		Synpcc7942_1367	0.59	-0.3
1,406,076	-		Synpcc7942_1367	0.60	-0.9
1,406,106	+		Synpcc7942_1367	0.62	-0.9
1,406,106	+		Synpcc7942_1367	0.62	-0.7
1,406,106	+		Synpcc7942_1367	0.62	+0.7
1,406,106	+		Synpcc7942_1367	0.62	+0.6
1,406,106	+		Synpcc7942_1367	0.62	+1.5
1,406,114	-		Synpcc7942_1367	0.62	+0.5
1,406,124	-		Synpcc7942_1367	0.63	+0.3
1,406,129	-		Synpcc7942_1367	0.63	+0.0
1,406,161	+		Synpcc7942_1367	0.66	+0.3
1,406,177	-		Synpcc7942_1367	0.67	+0.5
1,406,184	-		Synpcc7942_1367	0.67	+0.4
1,406,206	-		Synpcc7942_1367	0.69	+1.0
1,406,265	-		Synpcc7942_1367	0.73	+1.8
1,406,267	+		Synpcc7942_1367	0.73	+0.3
1,406,267	+		Synpcc7942_1367	0.73	+1.4
1,406,267	+		Synpcc7942_1367	0.73	+1.3
1,406,267	+		Synpcc7942_1367	0.73	+0.1
1,406,267	+		Synpcc7942_1367	0.73	+0.5
1,406,275	-		Synpcc7942_1367	0.74	+0.2
1,406,275	-		Synpcc7942_1367	0.74	-0.1
1,406,275	-		Synpcc7942_1367	0.74	+0.0
1,406,315	+		Synpcc7942_1367	0.77	-0.1
1,406,337	+		Synpcc7942_1367	0.79	+0.2
1,406,337	+		Synpcc7942_1367	0.79	+0.4
1,406,338	+		Synpcc7942_1367	0.79	-0.7
1,406,338	+		Synpcc7942_1367	0.79	+0.5
1,406,345	-		Synpcc7942_1367	0.79	+0.2
1,406,348	+		Synpcc7942_1367	0.79	+0.1
1,406,425	-		Synpcc7942_1367	0.85	+0.1
1,406,427	+		Synpcc7942_1367	0.85	-1.9
1,406,438	-		Synpcc7942_1367	0.86	+0.3
1,406,450	-		Synpcc7942_1367	0.87	+0.2
1,406,457	+		Synpcc7942_1367	0.87	+0.5
1,406,463	+		Synpcc7942_1367	0.88	+0.2
1,406,499	+				-1.6
1,406,509	-				+0.1
1,406,511	+				-0.1
1,406,526	+				-0.5
1,406,547	+				-0.2
1,406,547	+				+1.1
1,406,558	+				-0.4
1,406,598	+				+0.1
1,406,601	+				+0.2
1,406,612	+				-0.5
1,406,624	+				-0.0
1,406,652	+				-0.2
1,406,661	+				+0.1
1,406,664	+				+0.9
1,406,665	-				+0.3
1,406,674	+				+0.5
1,406,674	+				-0.4
1,406,674	+				-0.4
1,406,674	-				-0.3
1,406,676	+				+0.1
1,406,676	+				+0.2
1,406,676	+				+0.5
1,406,682	-				+0.0
1,406,682	-				-1.0
1,406,684	+				-0.3
1,406,684	-				+0.5
1,406,684	-				+0.4
1,406,696	+		Synpcc7942_1368	0.12	-0.4
1,406,707	+		Synpcc7942_1368	0.15	+1.2
1,406,737	-		Synpcc7942_1368	0.24	+0.4
1,406,742	-				-1.5
1,406,749	+		Synpcc7942_1368	0.27	+0.7
1,406,812	+		Synpcc7942_1368	0.46	-0.5
1,406,817	+		Synpcc7942_1368	0.48	-0.5
1,406,819	+		Synpcc7942_1368	0.48	+0.1
1,406,834	-		Synpcc7942_1368	0.53	+0.6
1,406,867	-		Synpcc7942_1368	0.62	+0.7
1,406,877	+		Synpcc7942_1368	0.65	+0.1
1,406,885	+		Synpcc7942_1368	0.68	+0.3
1,406,885	-		Synpcc7942_1368	0.68	+0.7
1,406,927	+		Synpcc7942_1368	0.80	-1.0
1,406,929	-		Synpcc7942_1368	0.81	-0.1
1,406,960	+				-0.1
1,406,960	+				-0.9
1,406,965	+				+0.8
1,406,965	+				-0.7
1,406,968	-				+0.8
1,406,968	-				+0.6
1,406,968	-				+0.1
1,406,968	-				-0.5
1,406,973	-				+0.2
1,406,973	-				+0.2
1,406,986	+				+0.3
1,406,986	+				-0.4
1,406,994	-				+1.1
1,406,994	-				-0.3
1,407,025	+				+0.2
1,407,123	+				+0.7
1,407,151	+				-0.0
1,407,159	-				+0.3
1,407,171	-				+0.4
1,407,194	+				+0.1
1,407,199	+				-0.3
1,407,207	-				-0.1
1,407,212	-				+0.2