Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1281

Experiment: Light Dark first sampling rep2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Light Dark first sampling rep2
1,302,155	+		Synpcc7942_1280	0.10	-0.2
1,302,192	-		Synpcc7942_1280	0.14	+0.3
1,302,196	+		Synpcc7942_1280	0.14	+0.0
1,302,196	+		Synpcc7942_1280	0.14	+0.1
1,302,196	+		Synpcc7942_1280	0.14	+0.4
1,302,196	+		Synpcc7942_1280	0.14	+0.3
1,302,204	+		Synpcc7942_1280	0.15	-0.0
1,302,204	-		Synpcc7942_1280	0.15	-1.1
1,302,204	-		Synpcc7942_1280	0.15	-0.1
1,302,204	-		Synpcc7942_1280	0.15	+0.3
1,302,204	-		Synpcc7942_1280	0.15	+0.3
1,302,204	-		Synpcc7942_1280	0.15	-0.7
1,302,204	-		Synpcc7942_1280	0.15	+0.8
1,302,204	-		Synpcc7942_1280	0.15	+1.2
1,302,209	+		Synpcc7942_1280	0.15	+1.4
1,302,212	-		Synpcc7942_1280	0.15	+0.4
1,302,221	-		Synpcc7942_1280	0.16	+0.1
1,302,232	+		Synpcc7942_1280	0.17	+0.4
1,302,245	+		Synpcc7942_1280	0.18	+0.3
1,302,264	+		Synpcc7942_1280	0.20	-1.0
1,302,272	-		Synpcc7942_1280	0.21	-0.2
1,302,274	+		Synpcc7942_1280	0.21	+0.4
1,302,275	+		Synpcc7942_1280	0.21	-1.8
1,302,280	+		Synpcc7942_1280	0.22	-0.1
1,302,283	-		Synpcc7942_1280	0.22	-0.3
1,302,287	+		Synpcc7942_1280	0.22	-0.1
1,302,319	+		Synpcc7942_1280	0.25	-0.2
1,302,343	+		Synpcc7942_1280	0.27	-0.1
1,302,344	+		Synpcc7942_1280	0.27	+0.1
1,302,352	-		Synpcc7942_1280	0.28	+0.2
1,302,363	+		Synpcc7942_1280	0.29	+0.7
1,302,367	+				+1.0
1,302,427	+		Synpcc7942_1280	0.35	+0.7
1,302,435	-		Synpcc7942_1280	0.36	+0.7
1,302,436	+		Synpcc7942_1280	0.36	+0.0
1,302,444	-		Synpcc7942_1280	0.37	+0.5
1,302,455	-		Synpcc7942_1280	0.38	-0.4
1,302,455	-		Synpcc7942_1280	0.38	-0.5
1,302,511	+		Synpcc7942_1280	0.43	+0.3
1,302,517	+		Synpcc7942_1280	0.43	+0.4
1,302,519	-		Synpcc7942_1280	0.43	-0.4
1,302,538	-		Synpcc7942_1280	0.45	-0.2
1,302,551	+		Synpcc7942_1280	0.46	-0.4
1,302,554	-		Synpcc7942_1280	0.47	+0.2
1,302,579	+		Synpcc7942_1280	0.49	-0.8
1,302,579	+		Synpcc7942_1280	0.49	+0.5
1,302,579	+		Synpcc7942_1280	0.49	+0.5
1,302,579	+		Synpcc7942_1280	0.49	+0.4
1,302,579	+		Synpcc7942_1280	0.49	-0.2
1,302,579	+		Synpcc7942_1280	0.49	+1.2
1,302,579	+		Synpcc7942_1280	0.49	+0.3
1,302,579	+		Synpcc7942_1280	0.49	+0.3
1,302,581	+		Synpcc7942_1280	0.49	+0.5
1,302,582	-		Synpcc7942_1280	0.49	-0.1
1,302,587	-		Synpcc7942_1280	0.50	+0.1
1,302,587	-		Synpcc7942_1280	0.50	+0.2
1,302,587	-		Synpcc7942_1280	0.50	-2.0
1,302,587	-		Synpcc7942_1280	0.50	+0.4
1,302,587	-		Synpcc7942_1280	0.50	+0.7
1,302,592	-		Synpcc7942_1280	0.50	-0.2
1,302,638	+		Synpcc7942_1280	0.54	+0.7
1,302,640	-		Synpcc7942_1280	0.54	+0.4
1,302,645	-		Synpcc7942_1280	0.55	-0.7
1,302,648	+		Synpcc7942_1280	0.55	+0.2
1,302,648	+		Synpcc7942_1280	0.55	-0.1
1,302,648	+		Synpcc7942_1280	0.55	-0.1
1,302,651	-		Synpcc7942_1280	0.55	+2.3
1,302,653	+		Synpcc7942_1280	0.56	-0.2
1,302,653	+		Synpcc7942_1280	0.56	-0.3
1,302,653	+		Synpcc7942_1280	0.56	-0.3
1,302,656	-		Synpcc7942_1280	0.56	-0.7
1,302,658	+		Synpcc7942_1280	0.56	-0.5
1,302,699	-		Synpcc7942_1280	0.60	+0.3
1,302,709	+		Synpcc7942_1280	0.61	+0.0
1,302,723	+		Synpcc7942_1280	0.62	+0.3
1,302,731	-		Synpcc7942_1280	0.63	-0.1
1,302,731	-		Synpcc7942_1280	0.63	-1.2
1,302,733	+		Synpcc7942_1280	0.63	+0.7
1,302,741	-		Synpcc7942_1280	0.64	-0.1
1,302,745	+		Synpcc7942_1280	0.64	-0.7
1,302,763	-		Synpcc7942_1280	0.66	+0.2
1,302,763	-		Synpcc7942_1280	0.66	-0.0
1,302,763	-		Synpcc7942_1280	0.66	+1.7
1,302,773	+		Synpcc7942_1280	0.67	+0.7
1,302,781	-		Synpcc7942_1280	0.67	+0.5
1,302,781	-		Synpcc7942_1280	0.67	+0.5
1,302,801	-		Synpcc7942_1280	0.69	-0.4
1,302,803	-		Synpcc7942_1280	0.69	+1.2
1,302,811	+		Synpcc7942_1280	0.70	+0.6
1,302,825	+		Synpcc7942_1280	0.71	-0.5
1,302,825	+		Synpcc7942_1280	0.71	+0.9
1,302,831	-		Synpcc7942_1280	0.72	+0.3
1,302,831	-		Synpcc7942_1280	0.72	+0.4
1,302,831	-		Synpcc7942_1280	0.72	+0.0
1,302,832	-		Synpcc7942_1280	0.72	-0.1
1,302,862	-		Synpcc7942_1280	0.75	-0.1
1,302,863	+		Synpcc7942_1280	0.75	-0.9
1,302,869	+		Synpcc7942_1280	0.75	-0.5
1,302,874	+		Synpcc7942_1280	0.76	+0.5
1,302,936	-		Synpcc7942_1280	0.81	-0.5
1,302,951	+		Synpcc7942_1280	0.83	+0.4
1,302,965	+		Synpcc7942_1280	0.84	+0.7
1,302,973	-		Synpcc7942_1280	0.85	-1.7
1,302,992	+		Synpcc7942_1280	0.87	-0.4
1,302,993	+		Synpcc7942_1280	0.87	-1.5
1,302,997	+		Synpcc7942_1280	0.87	-1.7
1,303,000	-		Synpcc7942_1280	0.87	+0.0
1,303,000	-		Synpcc7942_1280	0.87	-1.5
1,303,005	-		Synpcc7942_1280	0.88	-0.5
1,303,005	-		Synpcc7942_1280	0.88	-0.5
1,303,006	+		Synpcc7942_1280	0.88	+0.4
1,303,010	-		Synpcc7942_1280	0.88	+0.0
1,303,064	-				+0.0
1,303,085	+				-1.0
1,303,086	+				+0.1
1,303,094	-				-0.1
1,303,108	-				-0.4
1,303,113	-				-0.0
1,303,116	+				-0.6
1,303,116	+				-0.6
1,303,121	+				-0.3
1,303,123	+				+0.3
1,303,124	-				-0.4
1,303,124	-				-0.5
1,303,131	-				-0.5
1,303,131	-				+0.2
1,303,141	-				+0.9
1,303,142	+				-0.4
1,303,146	+				-0.1
1,303,147	+				+0.4
1,303,147	+				+0.3
1,303,156	+				+0.6
1,303,161	+				+1.0
1,303,166	+				-1.5
1,303,166	+				+0.1
1,303,174	-				+1.0
1,303,174	-				-0.0
1,303,174	-				-1.3
1,303,186	+				-0.7
1,303,213	+				+0.1
1,303,213	+				+0.2
1,303,221	-		Synpcc7942_1281	0.11	-0.1
1,303,222	+		Synpcc7942_1281	0.11	+0.4
1,303,312	-		Synpcc7942_1281	0.24	-0.2
1,303,312	-		Synpcc7942_1281	0.24	+0.7
1,303,331	-		Synpcc7942_1281	0.27	+0.7
1,303,343	+		Synpcc7942_1281	0.29	+1.6
1,303,367	+		Synpcc7942_1281	0.32	+0.3
1,303,431	+		Synpcc7942_1281	0.41	-0.1
1,303,432	-		Synpcc7942_1281	0.42	+0.5
1,303,432	-		Synpcc7942_1281	0.42	+0.4
1,303,474	-		Synpcc7942_1281	0.48	+0.9
1,303,481	+		Synpcc7942_1281	0.49	+0.0
1,303,489	-		Synpcc7942_1281	0.50	+0.2
1,303,507	-		Synpcc7942_1281	0.52	+0.5
1,303,559	+		Synpcc7942_1281	0.60	+0.7
1,303,559	+		Synpcc7942_1281	0.60	+0.0
1,303,559	+		Synpcc7942_1281	0.60	-0.0
1,303,584	+		Synpcc7942_1281	0.63	+0.7
1,303,592	-		Synpcc7942_1281	0.65	-0.0
1,303,597	-		Synpcc7942_1281	0.65	-0.7
1,303,605	-		Synpcc7942_1281	0.67	-0.6
1,303,648	+		Synpcc7942_1281	0.73	-0.3
1,303,654	-		Synpcc7942_1281	0.74	+0.8
1,303,697	+		Synpcc7942_1281	0.80	-0.5
1,303,714	-		Synpcc7942_1281	0.82	+0.5
1,303,725	-		Synpcc7942_1281	0.84	+0.5
1,303,743	-		Synpcc7942_1281	0.86	-0.4
1,303,749	-		Synpcc7942_1281	0.87	+0.2
1,303,761	-		Synpcc7942_1281	0.89	-0.1
1,303,780	-				-0.3
1,303,954	+				-0.3
1,303,965	+				+0.5
1,303,965	+				-0.0
1,303,965	+				-0.7
1,303,965	+				-0.4
1,303,965	+				+0.6
1,303,973	-				-0.2
1,303,973	-				-0.0
1,303,973	-				+0.2
1,303,973	-				+0.9
1,303,973	-				+0.5
1,303,973	-				-0.4
1,303,973	-				-1.2
1,303,973	-				-0.2
1,304,000	+				-0.1
1,304,008	-				-0.6
1,304,009	-				-0.0
1,304,017	-				-0.1
1,304,055	-				-0.4
1,304,374	-				+0.3
1,304,374	-				+1.0
1,304,411	-				+0.8
1,304,435	-				+0.2
1,304,453	+				-2.1
1,304,472	+				-2.2
1,304,473	-				-0.2