Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1141

Experiment: Light Dark first sampling rep2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Light Dark first sampling rep2
1,165,135	-		Synpcc7942_1140	0.45	+0.7
1,165,151	+		Synpcc7942_1140	0.46	-0.5
1,165,151	+		Synpcc7942_1140	0.46	-0.3
1,165,160	-		Synpcc7942_1140	0.46	-0.3
1,165,165	+		Synpcc7942_1140	0.46	+0.0
1,165,173	-		Synpcc7942_1140	0.47	+0.3
1,165,173	-		Synpcc7942_1140	0.47	-0.7
1,165,181	+		Synpcc7942_1140	0.47	-0.5
1,165,206	+		Synpcc7942_1140	0.49	-2.2
1,165,217	+		Synpcc7942_1140	0.49	+0.2
1,165,245	-		Synpcc7942_1140	0.51	+0.1
1,165,253	+		Synpcc7942_1140	0.51	+0.1
1,165,261	-		Synpcc7942_1140	0.52	+0.2
1,165,267	-		Synpcc7942_1140	0.52	-0.3
1,165,273	-		Synpcc7942_1140	0.53	-0.1
1,165,300	-		Synpcc7942_1140	0.54	-1.0
1,165,310	+		Synpcc7942_1140	0.55	-0.8
1,165,315	+		Synpcc7942_1140	0.55	-0.3
1,165,323	-		Synpcc7942_1140	0.55	+0.8
1,165,325	+		Synpcc7942_1140	0.55	+0.1
1,165,325	+		Synpcc7942_1140	0.55	-0.4
1,165,333	-		Synpcc7942_1140	0.56	+0.2
1,165,333	-		Synpcc7942_1140	0.56	-1.0
1,165,333	-		Synpcc7942_1140	0.56	-2.9
1,165,369	+		Synpcc7942_1140	0.58	-0.5
1,165,372	-		Synpcc7942_1140	0.58	+0.2
1,165,385	+		Synpcc7942_1140	0.59	+0.1
1,165,421	-		Synpcc7942_1140	0.61	+0.1
1,165,428	+		Synpcc7942_1140	0.61	-0.0
1,165,437	+		Synpcc7942_1140	0.62	-0.6
1,165,452	+		Synpcc7942_1140	0.63	-0.2
1,165,455	-		Synpcc7942_1140	0.63	-0.2
1,165,460	-		Synpcc7942_1140	0.63	-0.2
1,165,488	+		Synpcc7942_1140	0.65	+0.3
1,165,492	+		Synpcc7942_1140	0.65	-0.6
1,165,493	+		Synpcc7942_1140	0.65	-0.3
1,165,493	+		Synpcc7942_1140	0.65	-0.1
1,165,496	-		Synpcc7942_1140	0.65	-0.4
1,165,496	-		Synpcc7942_1140	0.65	-1.0
1,165,496	-				-0.8
1,165,498	+		Synpcc7942_1140	0.65	-0.5
1,165,521	+		Synpcc7942_1140	0.67	-2.9
1,165,536	+		Synpcc7942_1140	0.67	-0.5
1,165,536	+		Synpcc7942_1140	0.67	-0.5
1,165,544	-		Synpcc7942_1140	0.68	+0.2
1,165,552	+		Synpcc7942_1140	0.68	-0.6
1,165,563	-		Synpcc7942_1140	0.69	-0.6
1,165,575	+		Synpcc7942_1140	0.70	+0.0
1,165,599	-		Synpcc7942_1140	0.71	-1.1
1,165,603	+		Synpcc7942_1140	0.71	+0.2
1,165,622	-		Synpcc7942_1140	0.72	+0.1
1,165,658	+		Synpcc7942_1140	0.74	+0.3
1,165,658	+		Synpcc7942_1140	0.74	-0.9
1,165,658	+		Synpcc7942_1140	0.74	-0.2
1,165,684	+		Synpcc7942_1140	0.76	-0.4
1,165,764	+		Synpcc7942_1140	0.80	-0.2
1,165,870	-		Synpcc7942_1140	0.86	-1.1
1,165,883	-		Synpcc7942_1140	0.87	-1.0
1,165,883	-		Synpcc7942_1140	0.87	-0.1
1,165,916	-		Synpcc7942_1140	0.89	-1.0
1,165,916	-		Synpcc7942_1140	0.89	-0.4
1,165,916	-		Synpcc7942_1140	0.89	-0.2
1,165,937	-				-0.3
1,165,943	+				-0.3
1,165,961	-				+0.5
1,165,961	-				-0.1
1,165,987	+				-0.7
1,165,988	+				-0.3
1,165,996	-				-0.7
1,166,006	-				+0.4
1,166,020	-				-0.2
1,166,034	+				-0.3
1,166,049	-				-0.4
1,166,061	+				-0.7
1,166,075	+				-0.0
1,166,080	+				-0.6
1,166,080	+				-0.0
1,166,097	+				+1.2
1,166,099	+				+1.1
1,166,112	-				-0.3
1,166,123	+				-0.1
1,166,123	+				-0.4
1,166,131	-				+0.7
1,166,135	+				+0.1
1,166,192	+				+0.6
1,166,202	+		Synpcc7942_1141	0.11	+0.1
1,166,202	+		Synpcc7942_1141	0.11	+1.0
1,166,202	+		Synpcc7942_1141	0.11	+0.0
1,166,202	+		Synpcc7942_1141	0.11	-0.2
1,166,204	+		Synpcc7942_1141	0.11	-0.1
1,166,210	-		Synpcc7942_1141	0.12	+0.0
1,166,210	-		Synpcc7942_1141	0.12	-0.1
1,166,210	-		Synpcc7942_1141	0.12	-0.4
1,166,212	+		Synpcc7942_1141	0.13	+0.3
1,166,214	+		Synpcc7942_1141	0.13	+0.4
1,166,215	-		Synpcc7942_1141	0.13	+0.0
1,166,220	-		Synpcc7942_1141	0.14	-1.3
1,166,222	+		Synpcc7942_1141	0.14	+2.2
1,166,237	-		Synpcc7942_1141	0.16	+0.0
1,166,251	+		Synpcc7942_1141	0.18	+0.4
1,166,264	-		Synpcc7942_1141	0.20	+0.9
1,166,299	+		Synpcc7942_1141	0.25	-0.7
1,166,316	+		Synpcc7942_1141	0.28	+0.8
1,166,348	+		Synpcc7942_1141	0.32	+0.4
1,166,351	-		Synpcc7942_1141	0.33	+0.1
1,166,356	-		Synpcc7942_1141	0.33	-0.2
1,166,359	+		Synpcc7942_1141	0.34	+0.5
1,166,362	-		Synpcc7942_1141	0.34	+0.1
1,166,436	-		Synpcc7942_1141	0.45	-0.1
1,166,438	-		Synpcc7942_1141	0.45	+0.8
1,166,441	+		Synpcc7942_1141	0.46	-1.2
1,166,465	+		Synpcc7942_1141	0.49	+1.0
1,166,465	+		Synpcc7942_1141	0.49	-0.1
1,166,470	+		Synpcc7942_1141	0.50	-0.1
1,166,470	+		Synpcc7942_1141	0.50	-0.3
1,166,470	+		Synpcc7942_1141	0.50	+0.5
1,166,504	-		Synpcc7942_1141	0.55	-0.7
1,166,524	+		Synpcc7942_1141	0.58	-0.1
1,166,525	+		Synpcc7942_1141	0.58	-0.1
1,166,533	-		Synpcc7942_1141	0.59	-0.1
1,166,533	-		Synpcc7942_1141	0.59	-0.1
1,166,547	+		Synpcc7942_1141	0.61	-0.3
1,166,554	-		Synpcc7942_1141	0.62	+0.4
1,166,564	-		Synpcc7942_1141	0.64	+0.3
1,166,573	+		Synpcc7942_1141	0.65	-0.2
1,166,581	-		Synpcc7942_1141	0.66	+0.5
1,166,660	+		Synpcc7942_1141	0.78	-0.0
1,166,660	+		Synpcc7942_1141	0.78	+0.6
1,166,668	-		Synpcc7942_1141	0.79	+1.8
1,166,668	-		Synpcc7942_1141	0.79	+0.3
1,166,668	-		Synpcc7942_1141	0.79	+0.7
1,166,670	+		Synpcc7942_1141	0.79	+0.5
1,166,670	+		Synpcc7942_1141	0.79	+0.2
1,166,670	+		Synpcc7942_1141	0.79	-0.4
1,166,670	+		Synpcc7942_1141	0.79	+1.0
1,166,678	-		Synpcc7942_1141	0.80	-0.1
1,166,678	-		Synpcc7942_1141	0.80	+0.5
1,166,678	-		Synpcc7942_1141	0.80	-0.0
1,166,678	-		Synpcc7942_1141	0.80	+1.1
1,166,678	-		Synpcc7942_1141	0.80	+1.9
1,166,708	+		Synpcc7942_1141	0.85	+0.2
1,166,716	-		Synpcc7942_1141	0.86	-0.2
1,166,717	-		Synpcc7942_1141	0.86	+0.8
1,166,717	-		Synpcc7942_1141	0.86	+0.6
1,166,721	-		Synpcc7942_1141	0.87	+0.4
1,166,754	+				+0.6
1,166,754	+				+1.0
1,166,762	-				+0.4
1,166,762	-				+0.9
1,166,762	-				+0.4
1,166,762	-				-1.0
1,166,774	-				-1.2
1,166,786	-				+0.7
1,166,792	-				-0.3
1,166,816	-				+0.3
1,166,838	+				+1.0
1,166,867	-				+0.6
1,166,876	+				+0.3
1,166,945	+				+0.6
1,166,948	-				-0.1
1,166,953	-				-0.1
1,166,953	-				+0.1
1,166,953	-				-0.5
1,166,953	-				+0.1