Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_711 and Pf6N2E2_712 are separated by 4 nucleotides Pf6N2E2_712 and Pf6N2E2_713 overlap by 4 nucleotides
Pf6N2E2_711 - Nitric oxide reductase activation protein NorD, at 814,866 to 816,704
_711
Pf6N2E2_712 - hypothetical protein, at 816,709 to 816,909
_712
Pf6N2E2_713 - Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family), at 816,906 to 817,589
_713
Position (kb) 816
817 Strain fitness (log2 ratio) -2
-1
0
1 at 815.744 kb on + strand, within Pf6N2E2_711 at 815.745 kb on - strand, within Pf6N2E2_711 at 815.898 kb on - strand, within Pf6N2E2_711 at 816.162 kb on - strand, within Pf6N2E2_711 at 816.267 kb on + strand, within Pf6N2E2_711 at 816.267 kb on + strand, within Pf6N2E2_711 at 816.267 kb on + strand, within Pf6N2E2_711 at 816.268 kb on - strand, within Pf6N2E2_711 at 816.268 kb on - strand, within Pf6N2E2_711 at 816.381 kb on + strand, within Pf6N2E2_711 at 816.381 kb on + strand, within Pf6N2E2_711 at 816.381 kb on + strand, within Pf6N2E2_711 at 816.381 kb on + strand, within Pf6N2E2_711 at 816.382 kb on - strand, within Pf6N2E2_711 at 816.382 kb on - strand, within Pf6N2E2_711 at 816.382 kb on - strand, within Pf6N2E2_711 at 816.382 kb on - strand, within Pf6N2E2_711 at 816.495 kb on + strand, within Pf6N2E2_711 at 816.495 kb on + strand, within Pf6N2E2_711 at 816.495 kb on + strand, within Pf6N2E2_711 at 816.601 kb on - strand at 816.609 kb on + strand at 816.609 kb on + strand at 816.609 kb on + strand at 816.609 kb on + strand at 816.609 kb on + strand at 816.610 kb on - strand at 816.610 kb on - strand at 816.610 kb on - strand at 816.610 kb on - strand at 816.610 kb on - strand at 816.610 kb on - strand at 816.631 kb on - strand at 816.681 kb on + strand at 816.682 kb on - strand at 816.884 kb on + strand, within Pf6N2E2_712 at 816.884 kb on + strand, within Pf6N2E2_712 at 816.885 kb on - strand, within Pf6N2E2_712 at 816.885 kb on - strand, within Pf6N2E2_712 at 817.243 kb on + strand, within Pf6N2E2_713 at 817.243 kb on + strand, within Pf6N2E2_713 at 817.243 kb on + strand, within Pf6N2E2_713 at 817.243 kb on + strand, within Pf6N2E2_713 at 817.243 kb on + strand, within Pf6N2E2_713 at 817.243 kb on + strand, within Pf6N2E2_713 at 817.243 kb on + strand, within Pf6N2E2_713 at 817.244 kb on - strand, within Pf6N2E2_713 at 817.244 kb on - strand, within Pf6N2E2_713 at 817.244 kb on - strand, within Pf6N2E2_713 at 817.244 kb on - strand at 817.244 kb on - strand, within Pf6N2E2_713 at 817.244 kb on - strand, within Pf6N2E2_713 at 817.247 kb on + strand, within Pf6N2E2_713 at 817.264 kb on + strand, within Pf6N2E2_713 at 817.266 kb on + strand, within Pf6N2E2_713 at 817.266 kb on + strand, within Pf6N2E2_713 at 817.267 kb on - strand, within Pf6N2E2_713 at 817.267 kb on - strand, within Pf6N2E2_713 at 817.303 kb on + strand, within Pf6N2E2_713 at 817.304 kb on - strand, within Pf6N2E2_713 at 817.429 kb on + strand, within Pf6N2E2_713 at 817.605 kb on + strand at 817.606 kb on - strand at 817.606 kb on - strand at 817.606 kb on - strand at 817.606 kb on - strand at 817.606 kb on - strand at 817.798 kb on + strand at 817.799 kb on - strand at 817.799 kb on - strand at 817.861 kb on + strand at 817.878 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 815,744 + Pf6N2E2_711 0.48 +0.4 815,745 - Pf6N2E2_711 0.48 +0.2 815,898 - Pf6N2E2_711 0.56 +1.3 816,162 - Pf6N2E2_711 0.70 -0.4 816,267 + Pf6N2E2_711 0.76 +1.3 816,267 + Pf6N2E2_711 0.76 +0.2 816,267 + Pf6N2E2_711 0.76 -0.2 816,268 - Pf6N2E2_711 0.76 +1.0 816,268 - Pf6N2E2_711 0.76 -1.1 816,381 + Pf6N2E2_711 0.82 +0.8 816,381 + Pf6N2E2_711 0.82 -0.1 816,381 + Pf6N2E2_711 0.82 -0.4 816,381 + Pf6N2E2_711 0.82 +0.5 816,382 - Pf6N2E2_711 0.82 +0.7 816,382 - Pf6N2E2_711 0.82 -0.8 816,382 - Pf6N2E2_711 0.82 +0.0 816,382 - Pf6N2E2_711 0.82 -0.1 816,495 + Pf6N2E2_711 0.89 -1.3 816,495 + Pf6N2E2_711 0.89 +0.4 816,495 + Pf6N2E2_711 0.89 +0.3 816,601 - -1.4 816,609 + -0.3 816,609 + -0.4 816,609 + -0.0 816,609 + +0.1 816,609 + -0.1 816,610 - +0.5 816,610 - -0.2 816,610 - -0.2 816,610 - +0.8 816,610 - +0.6 816,610 - -1.0 816,631 - +0.4 816,681 + +0.7 816,682 - -0.2 816,884 + Pf6N2E2_712 0.87 -0.9 816,884 + Pf6N2E2_712 0.87 -0.6 816,885 - Pf6N2E2_712 0.88 -0.3 816,885 - Pf6N2E2_712 0.88 -1.5 817,243 + Pf6N2E2_713 0.49 -0.4 817,243 + Pf6N2E2_713 0.49 +0.6 817,243 + Pf6N2E2_713 0.49 -0.3 817,243 + Pf6N2E2_713 0.49 -0.9 817,243 + Pf6N2E2_713 0.49 +0.5 817,243 + Pf6N2E2_713 0.49 +0.3 817,243 + Pf6N2E2_713 0.49 +0.8 817,244 - Pf6N2E2_713 0.49 +0.2 817,244 - Pf6N2E2_713 0.49 -1.2 817,244 - Pf6N2E2_713 0.49 +0.1 817,244 - +0.4 817,244 - Pf6N2E2_713 0.49 +0.5 817,244 - Pf6N2E2_713 0.49 +1.3 817,247 + Pf6N2E2_713 0.50 +0.2 817,264 + Pf6N2E2_713 0.52 -1.6 817,266 + Pf6N2E2_713 0.53 -0.7 817,266 + Pf6N2E2_713 0.53 -2.1 817,267 - Pf6N2E2_713 0.53 +0.5 817,267 - Pf6N2E2_713 0.53 -1.6 817,303 + Pf6N2E2_713 0.58 +1.0 817,304 - Pf6N2E2_713 0.58 -0.1 817,429 + Pf6N2E2_713 0.76 +0.5 817,605 + +0.4 817,606 - +0.2 817,606 - +0.1 817,606 - -0.2 817,606 - +0.6 817,606 - -0.7 817,798 + -0.1 817,799 - +0.2 817,799 - +0.1 817,861 + -0.3 817,878 + -0.1
Or see this region's nucleotide sequence