Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24900

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
6,071,993	+				+1.8
6,071,993	+				+1.0
6,072,001	+				+0.1
6,072,040	-				+0.9
6,072,101	+				+0.7
6,072,102	-				-1.5
6,072,102	-				-0.3
6,072,137	+				-0.5
6,072,167	+				-1.6
6,072,346	+		CA265_RS24895	0.27	+0.4
6,072,347	-		CA265_RS24895	0.28	-0.3
6,072,351	-		CA265_RS24895	0.28	-0.7
6,072,365	+		CA265_RS24895	0.30	-0.3
6,072,382	+		CA265_RS24895	0.32	+0.8
6,072,468	-		CA265_RS24895	0.42	-1.7
6,072,567	+		CA265_RS24895	0.53	-0.6
6,072,567	+		CA265_RS24895	0.53	-0.9
6,072,568	-		CA265_RS24895	0.53	-0.5
6,072,585	-		CA265_RS24895	0.55	-0.3
6,072,618	+		CA265_RS24895	0.59	-1.1
6,072,620	+		CA265_RS24895	0.59	-1.0
6,072,630	+		CA265_RS24895	0.60	-2.8
6,072,631	-		CA265_RS24895	0.61	-0.1
6,072,672	+		CA265_RS24895	0.65	+0.3
6,072,701	-		CA265_RS24895	0.69	+1.2
6,072,744	+		CA265_RS24895	0.74	-0.4
6,072,811	+		CA265_RS24895	0.82	-1.1
6,072,811	+		CA265_RS24895	0.82	+0.1
6,072,812	-		CA265_RS24895	0.82	-0.3
6,072,812	-		CA265_RS24895	0.82	-0.2
6,072,833	+		CA265_RS24895	0.84	+0.2
6,072,934	-				-1.4
6,072,949	+				-0.2
6,072,950	-				-1.7
6,073,080	+		CA265_RS24900	0.20	+0.5
6,073,081	-		CA265_RS24900	0.20	-2.0
6,073,083	+		CA265_RS24900	0.20	+1.1
6,073,084	-		CA265_RS24900	0.20	-1.0
6,073,089	-		CA265_RS24900	0.21	+0.6
6,073,089	-		CA265_RS24900	0.21	+1.9
6,073,139	-		CA265_RS24900	0.30	-1.8
6,073,151	-		CA265_RS24900	0.33	-1.7
6,073,151	-		CA265_RS24900	0.33	-0.6
6,073,160	-		CA265_RS24900	0.34	+0.2
6,073,165	+		CA265_RS24900	0.35	+0.6
6,073,248	-		CA265_RS24900	0.50	-0.3
6,073,248	-		CA265_RS24900	0.50	-0.3
6,073,262	+		CA265_RS24900	0.53	-0.6
6,073,292	-		CA265_RS24900	0.58	-0.7
6,073,317	+		CA265_RS24900	0.63	+0.0
6,073,318	-		CA265_RS24900	0.63	+0.1
6,073,358	+		CA265_RS24900	0.70	-1.5
6,073,402	+		CA265_RS24900	0.78	+0.3
6,073,426	-		CA265_RS24900	0.82	+0.4
6,073,534	-				-0.3
6,073,534	-				-0.6
6,073,539	-				-0.2
6,073,604	-				+0.2
6,073,638	+				-0.0
6,073,639	-				+0.5
6,073,647	-				+0.9