Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14390

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
3,628,869	-		CA265_RS14385	0.38	+1.1
3,628,869	-		CA265_RS14385	0.38	-0.0
3,628,871	-		CA265_RS14385	0.38	+0.2
3,628,915	+		CA265_RS14385	0.42	+0.2
3,628,916	-		CA265_RS14385	0.42	+0.5
3,628,933	-		CA265_RS14385	0.43	+0.3
3,628,959	+		CA265_RS14385	0.45	+0.0
3,629,007	+		CA265_RS14385	0.49	+0.3
3,629,008	-		CA265_RS14385	0.49	-0.3
3,629,015	-		CA265_RS14385	0.50	-0.9
3,629,049	-		CA265_RS14385	0.52	+0.8
3,629,127	-		CA265_RS14385	0.58	+0.6
3,629,129	-		CA265_RS14385	0.59	+0.9
3,629,144	+		CA265_RS14385	0.60	+0.0
3,629,144	+		CA265_RS14385	0.60	+0.5
3,629,145	-		CA265_RS14385	0.60	-0.3
3,629,180	-		CA265_RS14385	0.63	-1.5
3,629,227	+		CA265_RS14385	0.66	+0.4
3,629,227	+		CA265_RS14385	0.66	+0.2
3,629,231	+		CA265_RS14385	0.67	-0.6
3,629,286	-		CA265_RS14385	0.71	+0.1
3,629,291	-		CA265_RS14385	0.71	+0.9
3,629,336	-		CA265_RS14385	0.75	-0.7
3,629,373	-		CA265_RS14385	0.78	+0.5
3,629,386	-		CA265_RS14385	0.79	-0.3
3,629,394	-		CA265_RS14385	0.80	-0.3
3,629,443	-		CA265_RS14385	0.83	-0.6
3,629,454	-		CA265_RS14385	0.84	-0.8
3,629,556	+				-0.3
3,629,608	-				-0.2
3,629,616	-				+0.3
3,629,618	-				-1.0
3,629,618	-				+0.4
3,629,618	-				-0.2
3,629,730	-				-0.4
3,629,738	+				+0.5
3,629,758	-				+0.6
3,629,782	+		CA265_RS14390	0.12	+0.7
3,629,845	-		CA265_RS14390	0.38	-0.1
3,629,899	+		CA265_RS14390	0.60	+1.0
3,629,900	-		CA265_RS14390	0.60	+0.3
3,629,927	-		CA265_RS14390	0.72	-0.5
3,630,021	+				-0.2
3,630,021	+				-0.2
3,630,027	-				-0.4
3,630,141	-				+0.3
3,630,151	-				+0.0
3,630,155	-				+0.5
3,630,155	-				+0.1
3,630,155	-				-0.1
3,630,251	-		CA265_RS14395	0.12	-0.2
3,630,270	+		CA265_RS14395	0.13	-0.3
3,630,271	-		CA265_RS14395	0.13	+0.9
3,630,274	+		CA265_RS14395	0.13	+0.4
3,630,274	+		CA265_RS14395	0.13	+0.1
3,630,275	-		CA265_RS14395	0.13	+0.1
3,630,306	+		CA265_RS14395	0.15	+0.5
3,630,310	+		CA265_RS14395	0.15	-0.1
3,630,367	-		CA265_RS14395	0.18	-1.1
3,630,419	-		CA265_RS14395	0.21	-0.8
3,630,438	-		CA265_RS14395	0.22	+0.4
3,630,438	-		CA265_RS14395	0.22	+0.7
3,630,438	-		CA265_RS14395	0.22	-0.4
3,630,510	-		CA265_RS14395	0.26	-0.1
3,630,555	-		CA265_RS14395	0.28	-0.0
3,630,621	-		CA265_RS14395	0.32	-0.5
3,630,631	-		CA265_RS14395	0.33	+0.1
3,630,638	+		CA265_RS14395	0.33	-0.5
3,630,639	-		CA265_RS14395	0.33	-0.2
3,630,640	+		CA265_RS14395	0.33	-0.1
3,630,659	-		CA265_RS14395	0.34	-0.7
3,630,751	-		CA265_RS14395	0.39	-1.3
3,630,781	+		CA265_RS14395	0.41	-1.2
3,630,782	-		CA265_RS14395	0.41	+0.2
3,630,814	+		CA265_RS14395	0.42	-0.1
3,630,885	-		CA265_RS14395	0.46	-0.5
3,630,896	-		CA265_RS14395	0.47	-1.1
3,630,956	-		CA265_RS14395	0.50	-0.4
3,630,989	-		CA265_RS14395	0.52	-0.7