Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13655

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
3,413,996	+		CA265_RS13650	0.45	+0.4
3,413,997	-		CA265_RS13650	0.45	+0.2
3,414,127	+		CA265_RS13650	0.53	+0.2
3,414,127	+		CA265_RS13650	0.53	+0.1
3,414,128	-		CA265_RS13650	0.53	-0.6
3,414,202	+		CA265_RS13650	0.58	-0.0
3,414,233	-		CA265_RS13650	0.60	+1.1
3,414,233	-		CA265_RS13650	0.60	-2.0
3,414,280	-		CA265_RS13650	0.62	+0.3
3,414,300	+		CA265_RS13650	0.64	+0.1
3,414,339	+		CA265_RS13650	0.66	-0.4
3,414,358	+		CA265_RS13650	0.67	-0.3
3,414,358	+		CA265_RS13650	0.67	-0.9
3,414,358	+		CA265_RS13650	0.67	+0.3
3,414,359	-		CA265_RS13650	0.67	+0.8
3,414,368	+		CA265_RS13650	0.68	+0.1
3,414,399	+		CA265_RS13650	0.70	+0.1
3,414,401	+		CA265_RS13650	0.70	-0.0
3,414,437	-		CA265_RS13650	0.72	-0.7
3,414,459	+		CA265_RS13650	0.73	-0.7
3,414,486	-		CA265_RS13650	0.75	+0.1
3,414,571	+		CA265_RS13650	0.80	-0.1
3,414,575	+		CA265_RS13650	0.80	+0.2
3,414,623	+		CA265_RS13650	0.83	+0.6
3,414,624	-		CA265_RS13650	0.83	-1.6
3,414,624	-		CA265_RS13650	0.83	-0.6
3,414,646	+		CA265_RS13650	0.85	+0.2
3,414,647	-		CA265_RS13650	0.85	+0.7
3,414,680	+		CA265_RS13650	0.87	-1.2
3,414,681	-		CA265_RS13650	0.87	-0.0
3,414,681	-		CA265_RS13650	0.87	-0.4
3,414,681	-		CA265_RS13650	0.87	-0.5
3,414,681	-		CA265_RS13650	0.87	+2.6
3,414,681	-		CA265_RS13650	0.87	+0.3
3,414,681	-		CA265_RS13650	0.87	-0.9
3,414,681	-		CA265_RS13650	0.87	-1.1
3,414,746	-				-1.1
3,414,747	+				-0.2
3,414,754	+				+0.4
3,414,769	+				+0.1
3,414,770	-				+0.7
3,414,886	-				-0.6
3,414,912	-				-0.8
3,414,954	+				+0.2
3,414,955	-				-0.2
3,415,052	+		CA265_RS13655	0.11	+1.5
3,415,053	-		CA265_RS13655	0.11	-0.3
3,415,077	-		CA265_RS13655	0.14	+0.2
3,415,150	+		CA265_RS13655	0.22	+0.3
3,415,151	-		CA265_RS13655	0.23	+0.1
3,415,172	-		CA265_RS13655	0.25	+0.4
3,415,173	+		CA265_RS13655	0.25	+0.2
3,415,173	+		CA265_RS13655	0.25	+0.2
3,415,173	+		CA265_RS13655	0.25	+2.6
3,415,232	-		CA265_RS13655	0.32	+0.6
3,415,232	-		CA265_RS13655	0.32	-0.1
3,415,256	-		CA265_RS13655	0.35	+0.1
3,415,327	+		CA265_RS13655	0.43	-0.1
3,415,353	+		CA265_RS13655	0.46	+0.1
3,415,353	+		CA265_RS13655	0.46	-0.6
3,415,388	-		CA265_RS13655	0.50	+0.2
3,415,393	+		CA265_RS13655	0.50	+1.4
3,415,393	+		CA265_RS13655	0.50	-1.3
3,415,393	+		CA265_RS13655	0.50	+0.3
3,415,394	-		CA265_RS13655	0.50	+0.1
3,415,397	+		CA265_RS13655	0.51	-2.0
3,415,398	-		CA265_RS13655	0.51	-0.4
3,415,420	+		CA265_RS13655	0.53	-1.7
3,415,451	-		CA265_RS13655	0.57	+2.0
3,415,472	-		CA265_RS13655	0.59	+1.1
3,415,475	-		CA265_RS13655	0.60	+0.1
3,415,475	-		CA265_RS13655	0.60	-0.2
3,415,622	+		CA265_RS13655	0.76	-0.2
3,415,623	-		CA265_RS13655	0.76	+0.9
3,415,652	-		CA265_RS13655	0.80	+0.1
3,415,652	-		CA265_RS13655	0.80	+1.7
3,415,703	-		CA265_RS13655	0.86	+0.8
3,415,801	-				-0.6
3,415,832	-				-0.4
3,415,832	-				-0.1
3,415,860	-				+0.1
3,415,938	+				+0.1
3,415,938	+				-0.0
3,415,976	+				+0.4
3,415,981	-				+0.5
3,416,109	+		CA265_RS13660	0.22	-0.3
3,416,110	-		CA265_RS13660	0.22	+0.3
3,416,142	+		CA265_RS13660	0.26	+0.4
3,416,164	-		CA265_RS13660	0.29	+1.6
3,416,167	+		CA265_RS13660	0.30	-0.6
3,416,176	-		CA265_RS13660	0.31	-0.1
3,416,241	+		CA265_RS13660	0.39	+0.8
3,416,243	+		CA265_RS13660	0.39	+0.2
3,416,244	-		CA265_RS13660	0.39	+1.6
3,416,244	-		CA265_RS13660	0.39	-0.2
3,416,291	-		CA265_RS13660	0.45	-0.3
3,416,296	-		CA265_RS13660	0.46	-0.3
3,416,296	-		CA265_RS13660	0.46	-0.3
3,416,308	-		CA265_RS13660	0.48	+1.6
3,416,308	-		CA265_RS13660	0.48	+0.5
3,416,401	-		CA265_RS13660	0.59	+0.8
3,416,419	+		CA265_RS13660	0.62	+0.3
3,416,420	-		CA265_RS13660	0.62	+1.2
3,416,443	+		CA265_RS13660	0.65	+1.0
3,416,449	-		CA265_RS13660	0.65	-0.3
3,416,514	+		CA265_RS13660	0.74	+0.6
3,416,524	-		CA265_RS13660	0.75	-0.1
3,416,535	+		CA265_RS13660	0.76	-0.1
3,416,535	+		CA265_RS13660	0.76	-0.2
3,416,535	+		CA265_RS13660	0.76	+1.1
3,416,535	+		CA265_RS13660	0.76	-0.1
3,416,536	-		CA265_RS13660	0.76	-0.6
3,416,536	-		CA265_RS13660	0.76	+0.0
3,416,536	-		CA265_RS13660	0.76	+0.3
3,416,611	+		CA265_RS13660	0.86	+0.2
3,416,613	+		CA265_RS13660	0.86	+1.1
3,416,670	+				-0.2
3,416,708	-				+0.3
3,416,713	+				-0.5
3,416,722	-				-0.3
3,416,765	-				+1.3
3,416,767	-				-0.6
3,416,767	-				+0.0
3,416,767	-				+0.5
3,416,777	-				-1.0