Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12855

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
3,203,801	-		CA265_RS12845	0.88	+0.6
3,203,831	-				+0.7
3,203,855	-				+1.1
3,203,906	-				+0.0
3,203,940	+				-0.9
3,203,944	+				+0.5
3,204,068	+				+0.6
3,204,109	-				-0.4
3,204,134	+				-0.4
3,204,194	+				-0.1
3,204,196	+				+0.7
3,204,196	+				+0.4
3,204,196	+				-0.3
3,204,197	-				-0.6
3,204,197	-				+0.7
3,204,197	-				-0.2
3,204,197	-				-0.2
3,204,197	-				+3.1
3,204,199	+				+0.9
3,204,200	-				+0.1
3,204,276	-				+0.8
3,204,276	-				-0.3
3,204,277	+				+0.2
3,204,383	+		CA265_RS12850	0.28	-0.3
3,204,469	-		CA265_RS12850	0.47	+0.2
3,204,486	+		CA265_RS12850	0.51	+0.3
3,204,487	-		CA265_RS12850	0.51	-1.0
3,204,524	+		CA265_RS12850	0.59	-0.4
3,204,576	-		CA265_RS12850	0.71	-0.2
3,204,634	+		CA265_RS12850	0.84	+0.8
3,204,635	-		CA265_RS12850	0.84	-0.3
3,204,696	+				-0.5
3,204,707	+				-0.2
3,204,707	+				-0.5
3,204,707	+				+0.5
3,204,707	+				-0.2
3,204,708	-				-1.3
3,204,709	+				-0.8
3,204,710	-				+0.1
3,204,715	+				+0.1
3,204,716	-				-0.1
3,204,741	-				+0.5
3,204,852	-		CA265_RS12855	0.32	-0.6
3,204,949	+		CA265_RS12855	0.60	+0.9
3,204,972	+		CA265_RS12855	0.66	+0.5
3,204,999	+		CA265_RS12855	0.74	+0.6
3,205,065	+				-0.1
3,205,100	+				+1.1
3,205,110	+				-0.4
3,205,118	-				-0.8
3,205,216	+				+0.4
3,205,225	-				+0.4
3,205,265	+				+1.1
3,205,267	+				-0.0
3,205,268	-				+0.7
3,205,268	-				+0.6
3,205,268	-				-0.5
3,205,348	+		CA265_RS12860	0.14	+0.4
3,205,349	-		CA265_RS12860	0.14	-0.4
3,205,398	+		CA265_RS12860	0.22	+0.1
3,205,399	-		CA265_RS12860	0.23	-0.3
3,205,513	-		CA265_RS12860	0.42	+0.3
3,205,533	-		CA265_RS12860	0.46	+0.0
3,205,581	-		CA265_RS12860	0.54	+0.1
3,205,586	-		CA265_RS12860	0.55	+0.7
3,205,628	-		CA265_RS12860	0.62	-0.5
3,205,706	+		CA265_RS12860	0.76	+0.0
3,205,827	-				-0.2
3,205,831	+				-1.2
3,205,832	-				-0.5
3,205,875	+				+0.5
3,205,875	+				-0.0
3,205,899	-				-0.3
3,205,934	+				+1.2
3,205,935	-				-1.0
3,205,935	-				-0.8
3,205,935	-				-0.1
3,206,027	+				-0.0
3,206,028	-				+0.8