Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12800

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
3,188,525	-		CA265_RS12795	0.39	+1.0
3,188,557	+		CA265_RS12795	0.41	-0.4
3,188,558	-		CA265_RS12795	0.42	+0.7
3,188,564	-		CA265_RS12795	0.42	-0.7
3,188,586	+		CA265_RS12795	0.44	+0.0
3,188,612	+		CA265_RS12795	0.46	+0.5
3,188,612	+		CA265_RS12795	0.46	+0.5
3,188,612	+				+2.1
3,188,694	+		CA265_RS12795	0.53	+0.2
3,188,695	-		CA265_RS12795	0.53	-0.4
3,188,698	+		CA265_RS12795	0.53	-1.7
3,188,698	+		CA265_RS12795	0.53	+0.1
3,188,699	-		CA265_RS12795	0.53	-0.1
3,188,699	-		CA265_RS12795	0.53	+1.3
3,188,729	+		CA265_RS12795	0.56	+0.8
3,188,788	-		CA265_RS12795	0.61	+0.0
3,188,937	+		CA265_RS12795	0.73	-1.2
3,188,937	+		CA265_RS12795	0.73	-1.2
3,189,013	+		CA265_RS12795	0.79	+0.5
3,189,057	+		CA265_RS12795	0.83	+0.5
3,189,058	-		CA265_RS12795	0.83	-0.5
3,189,089	+				-0.1
3,189,090	-		CA265_RS12795	0.86	-0.5
3,189,094	-		CA265_RS12795	0.86	+0.0
3,189,115	-		CA265_RS12795	0.88	+0.2
3,189,121	+		CA265_RS12795	0.88	-0.4
3,189,121	+		CA265_RS12795	0.88	+0.5
3,189,142	+				+0.3
3,189,177	-				+0.1
3,189,196	-				+0.1
3,189,249	-				-0.6
3,189,294	+				-0.7
3,189,357	+				-0.4
3,189,358	+				-0.5
3,189,358	-				-0.1
3,189,359	+				+0.1
3,189,404	+				-0.2
3,189,405	-				+1.2
3,189,418	+				+0.0
3,189,418	+				+0.2
3,189,419	-				-0.3
3,189,453	-		CA265_RS12800	0.16	+0.2
3,189,496	-		CA265_RS12800	0.24	+0.9
3,189,496	-		CA265_RS12800	0.24	+1.3
3,189,506	-		CA265_RS12800	0.25	+0.5
3,189,507	+		CA265_RS12800	0.26	+0.6
3,189,615	+		CA265_RS12800	0.45	-0.6
3,189,620	-		CA265_RS12800	0.46	-0.3
3,190,286	+				-0.8
3,190,326	+		CA265_RS12805	0.14	-0.2
3,190,339	-		CA265_RS12805	0.16	+0.4
3,190,396	-		CA265_RS12805	0.26	+0.2
3,190,420	+		CA265_RS12805	0.30	+0.5
3,190,526	+		CA265_RS12805	0.47	-1.0
3,190,527	-		CA265_RS12805	0.47	+0.5
3,190,640	-		CA265_RS12805	0.66	+0.1
3,190,640	-		CA265_RS12805	0.66	-0.1
3,190,640	-		CA265_RS12805	0.66	-0.0
3,190,657	-		CA265_RS12805	0.69	-0.2
3,190,769	-		CA265_RS12805	0.88	+2.5
3,190,821	+				+0.1
3,190,821	+				-0.7
3,190,822	-				-0.1
3,190,822	-				-0.5
3,190,822	-				+0.8
3,190,901	+				-0.3