Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12445

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
3,105,545	+		CA265_RS12435	0.71	-0.0
3,105,584	+		CA265_RS12435	0.78	-0.5
3,105,585	-		CA265_RS12435	0.78	-2.0
3,105,594	+		CA265_RS12435	0.80	+0.4
3,105,595	-		CA265_RS12435	0.80	+0.6
3,105,678	-				+0.3
3,105,789	-				+0.5
3,105,791	+				-0.2
3,105,941	+				-0.3
3,105,974	+				+0.3
3,106,010	+				+0.5
3,106,037	+				-0.3
3,106,143	+		CA265_RS12440	0.12	-0.4
3,106,143	+		CA265_RS12440	0.12	+0.4
3,106,197	-		CA265_RS12440	0.35	-0.2
3,106,301	-		CA265_RS12440	0.81	+0.3
3,106,311	-		CA265_RS12440	0.85	+0.6
3,106,374	-				+0.0
3,106,411	-				-0.4
3,106,411	-				-0.0
3,106,464	+				-2.0
3,106,464	+				+0.5
3,106,465	-				-0.4
3,106,495	-				-0.4
3,106,504	-				-0.1
3,106,577	+				-0.7
3,106,577	+				-0.2
3,106,578	-				-0.5
3,106,578	-				+1.0
3,106,644	-		CA265_RS12445	0.12	+0.3
3,106,667	+		CA265_RS12445	0.14	+0.9
3,106,667	+		CA265_RS12445	0.14	-0.4
3,106,667	+		CA265_RS12445	0.14	+0.2
3,106,712	+		CA265_RS12445	0.19	-0.1
3,106,720	+		CA265_RS12445	0.20	+0.1
3,106,720	+		CA265_RS12445	0.20	-0.6
3,106,724	-		CA265_RS12445	0.20	-1.3
3,106,746	+		CA265_RS12445	0.22	+0.1
3,106,746	+		CA265_RS12445	0.22	-1.3
3,106,766	+		CA265_RS12445	0.24	-0.4
3,106,801	-		CA265_RS12445	0.28	+0.2
3,106,867	+		CA265_RS12445	0.35	-0.2
3,106,868	-		CA265_RS12445	0.35	+0.3
3,106,869	+		CA265_RS12445	0.35	+0.4
3,106,870	-		CA265_RS12445	0.35	+0.5
3,106,908	+		CA265_RS12445	0.39	-0.2
3,106,972	+		CA265_RS12445	0.45	+0.9
3,106,972	+		CA265_RS12445	0.45	+0.1
3,106,973	-				+1.5
3,107,157	-		CA265_RS12445	0.64	+0.1
3,107,157	-		CA265_RS12445	0.64	+0.4
3,107,179	+		CA265_RS12445	0.66	+0.2
3,107,180	-		CA265_RS12445	0.66	+0.2
3,107,184	+		CA265_RS12445	0.67	-0.1
3,107,199	+		CA265_RS12445	0.68	+1.5
3,107,200	-		CA265_RS12445	0.68	-0.7
3,107,200	-		CA265_RS12445	0.68	+1.3
3,107,239	+		CA265_RS12445	0.72	+0.6
3,107,281	-		CA265_RS12445	0.77	-0.3
3,107,296	-		CA265_RS12445	0.78	+0.9
3,107,320	+		CA265_RS12445	0.81	+0.5
3,107,336	+		CA265_RS12445	0.82	-0.3
3,107,337	-		CA265_RS12445	0.82	+1.2
3,107,343	+		CA265_RS12445	0.83	+0.1
3,107,357	+		CA265_RS12445	0.84	+0.1
3,107,392	-		CA265_RS12445	0.88	-0.7
3,107,448	-				+2.7
3,107,515	-				-0.7
3,107,579	+				-0.4
3,107,579	+				+1.5
3,107,640	+		CA265_RS12450	0.15	-0.6
3,107,679	+		CA265_RS12450	0.21	-0.3
3,107,832	+		CA265_RS12450	0.42	-0.5
3,107,915	-		CA265_RS12450	0.54	-0.6
3,107,958	+		CA265_RS12450	0.60	+0.5
3,108,059	-		CA265_RS12450	0.74	-0.4
3,108,091	-		CA265_RS12450	0.79	+0.0
3,108,091	-		CA265_RS12450	0.79	+0.9
3,108,232	-				-0.2
3,108,233	+				+0.2
3,108,250	+				-0.6
3,108,255	+				+0.0
3,108,256	-				-0.4
3,108,406	+				-0.3
3,108,407	-				-0.6
3,108,408	+				-0.4
3,108,408	+				+0.5
3,108,453	+				+0.6
3,108,453	+				-0.7
3,108,453	+				+1.0
3,108,462	-				-0.5