Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10030

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
2,466,522	-		CA265_RS10025	0.40	+0.2
2,466,543	+		CA265_RS10025	0.41	+0.0
2,466,589	+		CA265_RS10025	0.44	-0.1
2,466,590	-		CA265_RS10025	0.44	+0.2
2,466,723	+		CA265_RS10025	0.53	+1.3
2,466,724	-		CA265_RS10025	0.53	-0.8
2,466,746	+		CA265_RS10025	0.55	-0.7
2,466,747	-		CA265_RS10025	0.55	-0.9
2,466,807	+		CA265_RS10025	0.59	-0.6
2,466,810	+		CA265_RS10025	0.59	+0.3
2,466,810	+		CA265_RS10025	0.59	+0.5
2,466,833	+		CA265_RS10025	0.61	-0.5
2,466,853	-		CA265_RS10025	0.62	-0.3
2,467,033	+		CA265_RS10025	0.74	+1.3
2,467,098	+		CA265_RS10025	0.79	-0.2
2,467,127	+		CA265_RS10025	0.81	+0.0
2,467,128	-		CA265_RS10025	0.81	-0.1
2,467,217	+		CA265_RS10025	0.87	-0.2
2,467,238	+		CA265_RS10025	0.88	-0.5
2,467,240	+		CA265_RS10025	0.88	+0.2
2,467,252	-		CA265_RS10025	0.89	-1.2
2,467,269	+				+0.5
2,467,410	-				-0.1
2,467,412	-				+0.6
2,467,451	+				+0.2
2,467,516	-		CA265_RS10030	0.18	-0.1
2,467,579	-		CA265_RS10030	0.29	+1.3
2,467,581	-		CA265_RS10030	0.30	+0.3
2,467,624	-		CA265_RS10030	0.37	+0.7
2,467,626	-		CA265_RS10030	0.37	+0.2
2,467,699	-		CA265_RS10030	0.50	-0.1
2,467,802	-		CA265_RS10030	0.67	-1.1
2,467,830	-		CA265_RS10030	0.72	+0.4
2,467,830	-		CA265_RS10030	0.72	+1.2
2,467,851	+		CA265_RS10030	0.76	+0.3
2,467,886	-		CA265_RS10030	0.82	+0.0
2,467,917	+		CA265_RS10030	0.87	+0.4
2,467,918	-		CA265_RS10030	0.87	+0.0
2,467,933	+		CA265_RS10030	0.90	-0.1
2,467,957	+				+0.4
2,467,993	-				+0.2
2,467,994	+				-0.2
2,468,041	-				-0.7
2,468,065	-				-1.1
2,468,133	-		CA265_RS10035	0.19	-0.3
2,468,157	+		CA265_RS10035	0.22	-0.5
2,468,163	+		CA265_RS10035	0.23	-0.3
2,468,217	-		CA265_RS10035	0.31	-0.2
2,468,297	-		CA265_RS10035	0.43	-0.5
2,468,297	-		CA265_RS10035	0.43	-0.8
2,468,414	+		CA265_RS10035	0.60	+1.1
2,468,414	+		CA265_RS10035	0.60	-0.3
2,468,632	-				+1.1
2,468,675	+				-0.4
2,468,690	+				-0.3
2,468,690	+				-0.1
2,468,735	-				-0.0
2,468,735	-				+0.9
2,468,740	+				-0.3
2,468,740	+				-0.6
2,468,808	-				+0.7
2,468,921	+		CA265_RS10040	0.17	+0.5
2,468,940	-		CA265_RS10040	0.27	-1.1
2,468,969	-		CA265_RS10040	0.41	-0.7