Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09425

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
2,333,411	+		CA265_RS09410	0.29	+0.3
2,333,418	+		CA265_RS09410	0.32	-0.1
2,333,419	-		CA265_RS09410	0.32	-1.1
2,333,483	+		CA265_RS09410	0.57	+1.1
2,333,495	+		CA265_RS09410	0.62	-0.3
2,333,495	+		CA265_RS09410	0.62	-1.6
2,333,526	-		CA265_RS09410	0.74	-0.7
2,333,555	+		CA265_RS09410	0.85	+0.5
2,333,555	+		CA265_RS09410	0.85	+1.2
2,333,594	+				+0.5
2,333,595	-				-0.6
2,333,605	+				+0.3
2,333,615	+		CA265_RS09415	0.11	+0.2
2,333,642	-		CA265_RS09415	0.24	-0.4
2,333,651	+		CA265_RS09415	0.28	-0.1
2,333,787	+				-0.3
2,333,787	+				-0.2
2,333,788	-				+0.6
2,333,850	+				-0.0
2,333,924	-				+1.7
2,333,967	+				-2.0
2,334,031	+				-0.3
2,334,158	+		CA265_RS09420	0.62	+0.7
2,334,177	-		CA265_RS09420	0.72	-1.7
2,334,180	+		CA265_RS09420	0.73	-0.1
2,334,425	-		CA265_RS09425	0.81	+0.6
2,334,460	+				+0.0
2,334,489	+				-0.3
2,334,496	+				+1.3
2,334,541	-				-0.6
2,334,548	+				+0.2
2,334,587	+				+0.1
2,334,587	+				+0.2
2,334,591	+				-0.5
2,334,723	-				+0.0
2,334,750	+				+0.4
2,334,751	-				-0.5
2,334,754	+				-0.2
2,334,754	+				-1.5
2,334,755	-				+0.4
2,334,755	-				-1.0
2,334,755	-				-0.2
2,334,793	+				+0.3
2,334,846	+		CA265_RS09430	0.14	-0.2
2,334,901	+		CA265_RS09430	0.18	-0.9
2,334,902	-		CA265_RS09430	0.19	-0.2
2,334,902	-		CA265_RS09430	0.19	-0.1
2,334,904	-		CA265_RS09430	0.19	-0.1
2,334,988	+		CA265_RS09430	0.26	-1.2
2,335,012	-		CA265_RS09430	0.28	+0.3
2,335,012	-		CA265_RS09430	0.28	-0.5
2,335,027	-		CA265_RS09430	0.29	-0.7
2,335,117	+		CA265_RS09430	0.37	-0.5
2,335,120	-		CA265_RS09430	0.38	-1.3
2,335,141	+		CA265_RS09430	0.39	+0.4
2,335,209	+		CA265_RS09430	0.45	+0.9
2,335,275	+		CA265_RS09430	0.51	+0.2
2,335,317	-		CA265_RS09430	0.55	-0.2
2,335,319	-		CA265_RS09430	0.55	+1.0
2,335,325	-		CA265_RS09430	0.55	+1.6
2,335,325	-		CA265_RS09430	0.55	+0.4
2,335,406	-		CA265_RS09430	0.63	-0.3