Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06775

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
1,672,613	+				+0.1
1,672,650	-				-0.2
1,672,705	+				+0.8
1,672,706	-				+0.6
1,672,706	-				+0.3
1,672,706	-				-0.0
1,672,808	+		CA265_RS06765	0.29	-0.3
1,672,857	-		CA265_RS06765	0.43	+0.2
1,672,860	-		CA265_RS06765	0.44	+0.1
1,672,872	+		CA265_RS06765	0.47	-1.2
1,672,873	-		CA265_RS06765	0.47	-0.2
1,672,873	-		CA265_RS06765	0.47	+0.0
1,672,875	+		CA265_RS06765	0.48	-0.1
1,672,882	+				+0.8
1,672,883	-		CA265_RS06765	0.50	+0.3
1,672,883	-		CA265_RS06765	0.50	-0.6
1,672,884	+		CA265_RS06765	0.51	-0.1
1,672,885	-		CA265_RS06765	0.51	-0.2
1,672,922	+		CA265_RS06765	0.61	-0.1
1,672,926	+		CA265_RS06765	0.63	-0.7
1,672,927	-		CA265_RS06765	0.63	-1.3
1,672,977	-		CA265_RS06765	0.77	+0.3
1,672,977	-		CA265_RS06765	0.77	+0.0
1,672,985	-		CA265_RS06765	0.80	+1.2
1,672,985	-		CA265_RS06765	0.80	+0.4
1,673,058	+				-0.1
1,673,058	+				-0.1
1,673,179	+		CA265_RS06770	0.43	+0.5
1,673,189	+		CA265_RS06770	0.47	+0.2
1,673,192	-		CA265_RS06770	0.48	-1.6
1,673,231	+		CA265_RS06770	0.62	-0.6
1,673,231	+		CA265_RS06770	0.62	-0.4
1,673,232	-		CA265_RS06770	0.62	+0.9
1,673,232	-		CA265_RS06770	0.62	-0.4
1,673,264	+		CA265_RS06770	0.73	+0.5
1,673,264	+		CA265_RS06770	0.73	-0.2
1,673,359	+				-0.8
1,673,372	+				-0.0
1,673,372	+				+0.4
1,673,415	+				-1.6
1,673,466	+				-1.2
1,673,506	-				+0.4
1,673,535	+				+0.1
1,673,536	-				-0.2
1,673,537	+				+0.1
1,673,545	+				+0.5
1,673,545	+				-0.8
1,673,576	+				+0.2
1,673,577	-				+0.4
1,673,582	+				+0.2
1,673,601	+				-0.1
1,673,602	-				+1.0
1,673,636	-				+0.4
1,673,649	+		CA265_RS06775	0.13	+0.5
1,673,668	+		CA265_RS06775	0.19	+0.1
1,673,714	-		CA265_RS06775	0.33	+0.1
1,673,741	-		CA265_RS06775	0.42	+1.1
1,673,781	+		CA265_RS06775	0.54	-0.2
1,673,781	+		CA265_RS06775	0.54	+0.6
1,673,878	-		CA265_RS06775	0.84	+0.2
1,673,951	+				+0.4
1,674,013	-				-0.5
1,674,098	+				-0.3
1,674,098	+				+0.4
1,674,099	-				-0.5
1,674,099	-				-0.1
1,674,128	-				+0.4
1,674,136	+				+0.1
1,674,136	+				+0.2
1,674,137	-				+0.0
1,674,137	-				-0.3
1,674,137	-				+0.4
1,674,243	+				-0.1
1,674,245	+				-1.0
1,674,245	+				+0.1
1,674,246	-				+0.3
1,674,246	-				+0.1
1,674,279	+				+1.0
1,674,280	-				+0.2
1,674,280	-				-0.2
1,674,332	+				+0.4
1,674,354	+				-0.7
1,674,354	+				+0.2
1,674,418	-				+0.2
1,674,526	+				+0.5
1,674,536	+				-0.6
1,674,633	-		CA265_RS06780	0.12	+0.1
1,674,644	+		CA265_RS06780	0.12	+0.8
1,674,644	+		CA265_RS06780	0.12	-0.3
1,674,707	+		CA265_RS06780	0.14	-0.0
1,674,711	+		CA265_RS06780	0.14	-0.9
1,674,712	-		CA265_RS06780	0.14	-0.8
1,674,712	-		CA265_RS06780	0.14	-0.4
1,674,716	+		CA265_RS06780	0.14	+0.1
1,674,833	-		CA265_RS06780	0.17	-0.3
1,674,872	+		CA265_RS06780	0.18	-0.7
1,674,886	+		CA265_RS06780	0.18	-0.5
1,674,901	+		CA265_RS06780	0.19	+0.0
1,674,902	-		CA265_RS06780	0.19	+0.4