Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_383 and Ac3H11_384 are separated by 156 nucleotides Ac3H11_384 and Ac3H11_385 are separated by 76 nucleotides Ac3H11_385 and Ac3H11_386 are separated by 100 nucleotides
Ac3H11_383 - FIG01198699: hypothetical protein, at 61,297 to 63,186
_383
Ac3H11_384 - possible endonuclease/exonuclease/phosphatase family protein, at 63,343 to 64,386
_384
Ac3H11_385 - Nucleoside-diphosphate-sugar epimerases, at 64,463 to 65,023
_385
Ac3H11_386 - ATP-dependent RNA helicase RhlE, at 65,124 to 66,935
_386
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1 at 62.685 kb on + strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.686 kb on - strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.239 kb on - strand at 63.239 kb on - strand at 63.239 kb on - strand at 63.263 kb on - strand at 63.270 kb on + strand at 63.270 kb on + strand at 63.271 kb on - strand at 63.271 kb on - strand at 63.271 kb on - strand at 63.344 kb on + strand at 63.345 kb on - strand at 63.455 kb on + strand, within Ac3H11_384 at 63.455 kb on + strand, within Ac3H11_384 at 63.455 kb on + strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.605 kb on + strand, within Ac3H11_384 at 63.605 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.743 kb on - strand, within Ac3H11_384 at 63.743 kb on - strand, within Ac3H11_384 at 63.743 kb on - strand at 63.743 kb on - strand, within Ac3H11_384 at 64.036 kb on + strand, within Ac3H11_384 at 64.140 kb on - strand, within Ac3H11_384 at 64.140 kb on - strand, within Ac3H11_384 at 64.277 kb on + strand, within Ac3H11_384 at 64.277 kb on + strand, within Ac3H11_384 at 64.277 kb on + strand, within Ac3H11_384 at 64.277 kb on + strand, within Ac3H11_384 at 64.278 kb on - strand, within Ac3H11_384 at 64.278 kb on - strand, within Ac3H11_384 at 64.278 kb on - strand, within Ac3H11_384 at 64.295 kb on + strand at 64.295 kb on + strand at 64.296 kb on - strand at 64.296 kb on - strand at 64.296 kb on - strand at 64.412 kb on - strand at 64.520 kb on + strand, within Ac3H11_385 at 64.520 kb on + strand, within Ac3H11_385 at 64.520 kb on + strand, within Ac3H11_385 at 64.521 kb on - strand, within Ac3H11_385 at 64.569 kb on + strand, within Ac3H11_385 at 64.569 kb on + strand, within Ac3H11_385 at 64.569 kb on + strand, within Ac3H11_385 at 64.569 kb on + strand, within Ac3H11_385 at 64.570 kb on - strand, within Ac3H11_385 at 64.570 kb on - strand, within Ac3H11_385 at 64.570 kb on - strand, within Ac3H11_385 at 64.684 kb on + strand, within Ac3H11_385 at 64.749 kb on + strand, within Ac3H11_385 at 64.749 kb on + strand, within Ac3H11_385 at 64.749 kb on + strand, within Ac3H11_385 at 64.750 kb on - strand, within Ac3H11_385 at 64.750 kb on - strand, within Ac3H11_385 at 64.750 kb on - strand, within Ac3H11_385 at 64.790 kb on + strand, within Ac3H11_385 at 64.790 kb on + strand, within Ac3H11_385 at 64.790 kb on + strand, within Ac3H11_385 at 64.791 kb on - strand, within Ac3H11_385 at 64.851 kb on + strand, within Ac3H11_385 at 64.851 kb on + strand, within Ac3H11_385 at 64.852 kb on - strand, within Ac3H11_385 at 64.852 kb on - strand, within Ac3H11_385 at 64.852 kb on - strand, within Ac3H11_385 at 64.852 kb on - strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.914 kb on + strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 64.915 kb on - strand, within Ac3H11_385 at 65.133 kb on - strand at 65.133 kb on - strand at 65.271 kb on + strand at 65.272 kb on - strand at 65.355 kb on - strand, within Ac3H11_386
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 62,685 + Ac3H11_383 0.73 -0.5 62,685 + Ac3H11_383 0.73 +0.1 62,685 + Ac3H11_383 0.73 +0.3 62,686 - Ac3H11_383 0.73 -1.1 62,786 + Ac3H11_383 0.79 -0.6 62,786 + Ac3H11_383 0.79 -0.3 62,786 + Ac3H11_383 0.79 -1.5 62,786 + Ac3H11_383 0.79 -0.2 62,787 - Ac3H11_383 0.79 -1.8 62,787 - Ac3H11_383 0.79 -1.2 62,787 - Ac3H11_383 0.79 -0.5 62,787 - Ac3H11_383 0.79 -0.2 62,832 - Ac3H11_383 0.81 -0.2 62,832 - Ac3H11_383 0.81 -0.4 62,832 - Ac3H11_383 0.81 -0.3 63,235 + +1.0 63,235 + -0.4 63,235 + +0.4 63,235 + +0.2 63,235 + -0.0 63,235 + +0.3 63,235 + +0.3 63,235 + -1.7 63,236 - -0.0 63,236 - -0.2 63,236 - +0.6 63,236 - +0.3 63,236 - -0.2 63,236 - +0.4 63,238 + +0.6 63,238 + +0.5 63,238 + -0.0 63,238 + -0.0 63,238 + +0.2 63,238 + +0.1 63,238 + +1.0 63,238 + +0.1 63,239 - +0.4 63,239 - -1.1 63,239 - +0.6 63,263 - +0.8 63,270 + -0.5 63,270 + -0.7 63,271 - +0.2 63,271 - -0.1 63,271 - -1.6 63,344 + +0.3 63,345 - -0.3 63,455 + Ac3H11_384 0.11 +0.3 63,455 + Ac3H11_384 0.11 -0.7 63,455 + Ac3H11_384 0.11 -0.4 63,456 - Ac3H11_384 0.11 -0.5 63,456 - Ac3H11_384 0.11 +0.9 63,456 - Ac3H11_384 0.11 -0.2 63,456 - Ac3H11_384 0.11 -0.8 63,605 + Ac3H11_384 0.25 -0.5 63,605 + Ac3H11_384 0.25 +0.1 63,742 + Ac3H11_384 0.38 -0.3 63,742 + Ac3H11_384 0.38 +0.9 63,742 + Ac3H11_384 0.38 -0.9 63,742 + Ac3H11_384 0.38 +0.2 63,743 - Ac3H11_384 0.38 +0.1 63,743 - Ac3H11_384 0.38 +0.5 63,743 - -0.3 63,743 - Ac3H11_384 0.38 -0.1 64,036 + Ac3H11_384 0.66 -1.0 64,140 - Ac3H11_384 0.76 -0.1 64,140 - Ac3H11_384 0.76 +0.2 64,277 + Ac3H11_384 0.89 -0.9 64,277 + Ac3H11_384 0.89 -1.3 64,277 + Ac3H11_384 0.89 -0.5 64,277 + Ac3H11_384 0.89 -0.9 64,278 - Ac3H11_384 0.90 +1.6 64,278 - Ac3H11_384 0.90 -0.7 64,278 - Ac3H11_384 0.90 +1.1 64,295 + -0.2 64,295 + +0.8 64,296 - +0.3 64,296 - +1.2 64,296 - -0.0 64,412 - +1.6 64,520 + Ac3H11_385 0.10 +1.3 64,520 + Ac3H11_385 0.10 +0.5 64,520 + Ac3H11_385 0.10 -0.9 64,521 - Ac3H11_385 0.10 -0.2 64,569 + Ac3H11_385 0.19 -1.3 64,569 + Ac3H11_385 0.19 +0.5 64,569 + Ac3H11_385 0.19 -0.2 64,569 + Ac3H11_385 0.19 +0.3 64,570 - Ac3H11_385 0.19 +1.1 64,570 - Ac3H11_385 0.19 +0.1 64,570 - Ac3H11_385 0.19 +0.5 64,684 + Ac3H11_385 0.39 +1.3 64,749 + Ac3H11_385 0.51 -0.1 64,749 + Ac3H11_385 0.51 -2.2 64,749 + Ac3H11_385 0.51 +0.3 64,750 - Ac3H11_385 0.51 +0.7 64,750 - Ac3H11_385 0.51 -0.5 64,750 - Ac3H11_385 0.51 -0.9 64,790 + Ac3H11_385 0.58 -0.3 64,790 + Ac3H11_385 0.58 +0.2 64,790 + Ac3H11_385 0.58 +0.8 64,791 - Ac3H11_385 0.58 +0.2 64,851 + Ac3H11_385 0.69 +0.6 64,851 + Ac3H11_385 0.69 -0.9 64,852 - Ac3H11_385 0.69 +0.1 64,852 - Ac3H11_385 0.69 -0.4 64,852 - Ac3H11_385 0.69 -0.2 64,852 - Ac3H11_385 0.69 -0.3 64,914 + Ac3H11_385 0.80 +0.3 64,914 + Ac3H11_385 0.80 -0.6 64,914 + Ac3H11_385 0.80 +0.5 64,914 + Ac3H11_385 0.80 -0.6 64,914 + Ac3H11_385 0.80 +1.4 64,914 + Ac3H11_385 0.80 -0.5 64,914 + Ac3H11_385 0.80 +0.6 64,914 + Ac3H11_385 0.80 +0.5 64,914 + Ac3H11_385 0.80 -0.8 64,914 + Ac3H11_385 0.80 +0.1 64,914 + Ac3H11_385 0.80 +0.1 64,915 - Ac3H11_385 0.81 +1.3 64,915 - Ac3H11_385 0.81 +0.6 64,915 - Ac3H11_385 0.81 +0.2 64,915 - Ac3H11_385 0.81 +0.1 64,915 - Ac3H11_385 0.81 -0.4 64,915 - Ac3H11_385 0.81 -0.2 64,915 - Ac3H11_385 0.81 +0.3 64,915 - Ac3H11_385 0.81 -0.1 64,915 - Ac3H11_385 0.81 +0.1 64,915 - Ac3H11_385 0.81 -0.3 64,915 - Ac3H11_385 0.81 -1.2 64,915 - Ac3H11_385 0.81 -0.1 64,915 - Ac3H11_385 0.81 +0.5 65,133 - +0.3 65,133 - +0.4 65,271 + -0.3 65,272 - +0.3 65,355 - Ac3H11_386 0.13 -0.0
Or see this region's nucleotide sequence