Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2405

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2404 and Ac3H11_2405 are separated by 10 nucleotidesAc3H11_2405 and Ac3H11_2406 are separated by 171 nucleotides Ac3H11_2404 - Aspartate aminotransferase (EC 2.6.1.1), at 660,473 to 661,639 _2404 Ac3H11_2405 - hypothetical protein, at 661,650 to 662,066 _2405 Ac3H11_2406 - Permease of the drug/metabolite transporter (DMT) superfamily, at 662,238 to 663,080 _2406 Position (kb) 661 662 663Strain fitness (log2 ratio) -2 -1 0 1 2at 660.743 kb on + strand, within Ac3H11_2404at 660.743 kb on + strand, within Ac3H11_2404at 660.854 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.863 kb on + strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 660.864 kb on - strand, within Ac3H11_2404at 661.094 kb on + strand, within Ac3H11_2404at 661.094 kb on + strand, within Ac3H11_2404at 661.094 kb on + strand, within Ac3H11_2404at 661.094 kb on + strand, within Ac3H11_2404at 661.095 kb on - strand, within Ac3H11_2404at 661.095 kb on - strand, within Ac3H11_2404at 661.319 kb on + strand, within Ac3H11_2404at 661.319 kb on + strand, within Ac3H11_2404at 661.320 kb on - strand, within Ac3H11_2404at 661.320 kb on - strand, within Ac3H11_2404at 661.340 kb on + strand, within Ac3H11_2404at 661.340 kb on + strand, within Ac3H11_2404at 661.361 kb on + strand, within Ac3H11_2404at 661.361 kb on + strand, within Ac3H11_2404at 661.361 kb on + strand, within Ac3H11_2404at 661.361 kb on + strand, within Ac3H11_2404at 661.362 kb on - strand, within Ac3H11_2404at 661.436 kb on + strand, within Ac3H11_2404at 661.437 kb on - strand, within Ac3H11_2404at 661.437 kb on - strand, within Ac3H11_2404at 661.437 kb on - strand, within Ac3H11_2404at 661.437 kb on - strand, within Ac3H11_2404at 661.544 kb on + strandat 661.545 kb on - strandat 661.545 kb on - strandat 661.712 kb on - strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.960 kb on + strand, within Ac3H11_2405at 661.961 kb on - strand, within Ac3H11_2405at 661.961 kb on - strand, within Ac3H11_2405at 661.961 kb on - strand, within Ac3H11_2405at 661.961 kb on - strand, within Ac3H11_2405at 661.961 kb on - strand, within Ac3H11_2405at 661.961 kb on - strand, within Ac3H11_2405at 662.021 kb on + strand, within Ac3H11_2405at 662.021 kb on + strand, within Ac3H11_2405at 662.022 kb on - strand, within Ac3H11_2405at 662.022 kb on - strand, within Ac3H11_2405at 662.226 kb on + strandat 662.227 kb on - strandat 662.509 kb on + strand, within Ac3H11_2406at 662.509 kb on + strand, within Ac3H11_2406at 662.509 kb on + strand, within Ac3H11_2406at 662.509 kb on + strand, within Ac3H11_2406at 662.509 kb on + strand, within Ac3H11_2406at 662.509 kb on + strand, within Ac3H11_2406at 662.510 kb on - strand, within Ac3H11_2406at 662.510 kb on - strand, within Ac3H11_2406at 662.510 kb on - strand, within Ac3H11_2406at 662.546 kb on - strand, within Ac3H11_2406at 662.600 kb on - strand, within Ac3H11_2406at 662.600 kb on - strand, within Ac3H11_2406at 662.618 kb on + strand, within Ac3H11_2406at 662.706 kb on + strand, within Ac3H11_2406at 662.872 kb on + strand, within Ac3H11_2406at 663.022 kb on + strandat 663.022 kb on + strandat 663.023 kb on - strandat 663.023 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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660,743 + Ac3H11_2404 0.23 +1.2
660,743 + Ac3H11_2404 0.23 -0.2
660,854 + Ac3H11_2404 0.33 -0.1
660,863 + Ac3H11_2404 0.33 -0.9
660,863 + Ac3H11_2404 0.33 -0.3
660,863 + Ac3H11_2404 0.33 +0.7
660,863 + Ac3H11_2404 0.33 -0.2
660,863 + Ac3H11_2404 0.33 +0.5
660,863 + Ac3H11_2404 0.33 -0.7
660,863 + Ac3H11_2404 0.33 +0.5
660,863 + Ac3H11_2404 0.33 -0.2
660,863 + Ac3H11_2404 0.33 +0.7
660,863 + Ac3H11_2404 0.33 +0.3
660,863 + Ac3H11_2404 0.33 +0.6
660,863 + Ac3H11_2404 0.33 -0.7
660,863 + Ac3H11_2404 0.33 +0.2
660,863 + Ac3H11_2404 0.33 +0.6
660,863 + Ac3H11_2404 0.33 -1.4
660,863 + Ac3H11_2404 0.33 -1.5
660,863 + Ac3H11_2404 0.33 +1.0
660,863 + Ac3H11_2404 0.33 -0.2
660,863 + Ac3H11_2404 0.33 +0.3
660,863 + Ac3H11_2404 0.33 -0.8
660,863 + Ac3H11_2404 0.33 -0.1
660,863 + Ac3H11_2404 0.33 +0.1
660,863 + Ac3H11_2404 0.33 +0.6
660,863 + Ac3H11_2404 0.33 -0.4
660,863 + Ac3H11_2404 0.33 +0.2
660,863 + Ac3H11_2404 0.33 -0.7
660,864 - Ac3H11_2404 0.34 +2.2
660,864 - Ac3H11_2404 0.34 +0.1
660,864 - Ac3H11_2404 0.34 -0.3
660,864 - Ac3H11_2404 0.34 +0.3
660,864 - Ac3H11_2404 0.34 +0.2
660,864 - Ac3H11_2404 0.34 -0.3
660,864 - Ac3H11_2404 0.34 +0.2
660,864 - Ac3H11_2404 0.34 +0.3
660,864 - Ac3H11_2404 0.34 -0.4
660,864 - Ac3H11_2404 0.34 -0.0
660,864 - Ac3H11_2404 0.34 -0.1
660,864 - Ac3H11_2404 0.34 -0.5
660,864 - Ac3H11_2404 0.34 -0.7
660,864 - Ac3H11_2404 0.34 +0.1
660,864 - Ac3H11_2404 0.34 +0.2
660,864 - Ac3H11_2404 0.34 +0.4
660,864 - Ac3H11_2404 0.34 -1.0
660,864 - Ac3H11_2404 0.34 -0.2
660,864 - Ac3H11_2404 0.34 +1.4
661,094 + Ac3H11_2404 0.53 -0.3
661,094 + Ac3H11_2404 0.53 -1.1
661,094 + Ac3H11_2404 0.53 -0.3
661,094 + Ac3H11_2404 0.53 +0.2
661,095 - Ac3H11_2404 0.53 -0.7
661,095 - Ac3H11_2404 0.53 -0.3
661,319 + Ac3H11_2404 0.72 -1.0
661,319 + Ac3H11_2404 0.72 -0.5
661,320 - Ac3H11_2404 0.73 -0.1
661,320 - Ac3H11_2404 0.73 +0.5
661,340 + Ac3H11_2404 0.74 -0.8
661,340 + Ac3H11_2404 0.74 +1.4
661,361 + Ac3H11_2404 0.76 -0.2
661,361 + Ac3H11_2404 0.76 -0.2
661,361 + Ac3H11_2404 0.76 -0.8
661,361 + Ac3H11_2404 0.76 -0.0
661,362 - Ac3H11_2404 0.76 +0.5
661,436 + Ac3H11_2404 0.83 -0.1
661,437 - Ac3H11_2404 0.83 -0.4
661,437 - Ac3H11_2404 0.83 +0.3
661,437 - Ac3H11_2404 0.83 -2.3
661,437 - Ac3H11_2404 0.83 +0.3
661,544 + -0.5
661,545 - +0.5
661,545 - -0.1
661,712 - Ac3H11_2405 0.15 +0.2
661,960 + Ac3H11_2405 0.74 +0.1
661,960 + Ac3H11_2405 0.74 -0.1
661,960 + Ac3H11_2405 0.74 +0.4
661,960 + Ac3H11_2405 0.74 -0.1
661,960 + Ac3H11_2405 0.74 -0.0
661,960 + Ac3H11_2405 0.74 -0.2
661,960 + Ac3H11_2405 0.74 -0.2
661,960 + Ac3H11_2405 0.74 +0.0
661,960 + Ac3H11_2405 0.74 +1.0
661,960 + Ac3H11_2405 0.74 -0.6
661,961 - Ac3H11_2405 0.75 +0.7
661,961 - Ac3H11_2405 0.75 -0.1
661,961 - Ac3H11_2405 0.75 +0.4
661,961 - Ac3H11_2405 0.75 +0.5
661,961 - Ac3H11_2405 0.75 +0.6
661,961 - Ac3H11_2405 0.75 -1.2
662,021 + Ac3H11_2405 0.89 -0.8
662,021 + Ac3H11_2405 0.89 +0.2
662,022 - Ac3H11_2405 0.89 -0.1
662,022 - Ac3H11_2405 0.89 -0.4
662,226 + -0.0
662,227 - +0.4
662,509 + Ac3H11_2406 0.32 +0.1
662,509 + Ac3H11_2406 0.32 -0.5
662,509 + Ac3H11_2406 0.32 -0.6
662,509 + Ac3H11_2406 0.32 +0.8
662,509 + Ac3H11_2406 0.32 +0.7
662,509 + Ac3H11_2406 0.32 -0.6
662,510 - Ac3H11_2406 0.32 -0.7
662,510 - Ac3H11_2406 0.32 -0.5
662,510 - Ac3H11_2406 0.32 -1.7
662,546 - Ac3H11_2406 0.37 +1.0
662,600 - Ac3H11_2406 0.43 +1.9
662,600 - Ac3H11_2406 0.43 -0.4
662,618 + Ac3H11_2406 0.45 +1.6
662,706 + Ac3H11_2406 0.56 -0.4
662,872 + Ac3H11_2406 0.75 +0.3
663,022 + +0.2
663,022 + -0.1
663,023 - -0.7
663,023 - -1.0

Or see this region's nucleotide sequence