Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28460 and AO353_28465 overlap by 4 nucleotides AO353_28465 and AO353_28470 are separated by 96 nucleotides AO353_28470 and AO353_28475 are separated by 82 nucleotides
AO353_28460: AO353_28460 - MFS transporter, at 6,200,288 to 6,201,874
_28460
AO353_28465: AO353_28465 - multidrug transporter, at 6,201,871 to 6,202,968
_28465
AO353_28470: AO353_28470 - cupin, at 6,203,065 to 6,203,478
_28470
AO353_28475: AO353_28475 - NmrA family transcriptional regulator, at 6,203,561 to 6,204,322
_28475
Position (kb)
6201
6202
6203 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6200.872 kb on + strand, within AO353_28460 at 6201.043 kb on + strand, within AO353_28460 at 6201.044 kb on - strand, within AO353_28460 at 6201.117 kb on - strand, within AO353_28460 at 6201.117 kb on - strand, within AO353_28460 at 6201.204 kb on + strand, within AO353_28460 at 6201.204 kb on + strand, within AO353_28460 at 6201.204 kb on + strand, within AO353_28460 at 6201.204 kb on + strand, within AO353_28460 at 6201.204 kb on + strand, within AO353_28460 at 6201.204 kb on + strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.205 kb on - strand, within AO353_28460 at 6201.400 kb on + strand, within AO353_28460 at 6201.400 kb on + strand, within AO353_28460 at 6201.401 kb on - strand, within AO353_28460 at 6201.401 kb on - strand, within AO353_28460 at 6201.447 kb on - strand, within AO353_28460 at 6201.447 kb on - strand, within AO353_28460 at 6201.687 kb on + strand, within AO353_28460 at 6201.688 kb on - strand, within AO353_28460 at 6201.688 kb on - strand, within AO353_28460 at 6201.688 kb on - strand, within AO353_28460 at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.726 kb on + strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.727 kb on - strand at 6201.761 kb on + strand at 6201.761 kb on + strand at 6201.761 kb on + strand at 6201.761 kb on + strand at 6201.762 kb on - strand at 6201.762 kb on - strand at 6202.125 kb on + strand, within AO353_28465 at 6202.125 kb on + strand, within AO353_28465 at 6202.125 kb on + strand, within AO353_28465 at 6202.126 kb on - strand, within AO353_28465 at 6202.126 kb on - strand, within AO353_28465 at 6202.277 kb on + strand, within AO353_28465 at 6202.277 kb on + strand, within AO353_28465 at 6202.278 kb on - strand, within AO353_28465 at 6202.278 kb on - strand, within AO353_28465 at 6202.358 kb on + strand, within AO353_28465 at 6202.358 kb on + strand, within AO353_28465 at 6202.359 kb on - strand, within AO353_28465 at 6202.359 kb on - strand, within AO353_28465 at 6202.359 kb on - strand, within AO353_28465 at 6202.359 kb on - strand, within AO353_28465 at 6202.359 kb on - strand, within AO353_28465 at 6202.359 kb on - strand, within AO353_28465 at 6202.739 kb on + strand, within AO353_28465 at 6202.739 kb on + strand, within AO353_28465 at 6202.784 kb on + strand, within AO353_28465 at 6202.784 kb on + strand, within AO353_28465 at 6202.784 kb on + strand, within AO353_28465 at 6202.784 kb on + strand, within AO353_28465 at 6202.784 kb on + strand, within AO353_28465 at 6202.784 kb on + strand, within AO353_28465 at 6202.785 kb on - strand, within AO353_28465 at 6202.785 kb on - strand, within AO353_28465 at 6202.785 kb on - strand, within AO353_28465 at 6202.785 kb on - strand, within AO353_28465 at 6202.785 kb on - strand, within AO353_28465 at 6202.870 kb on + strand at 6202.870 kb on + strand at 6202.871 kb on - strand at 6202.871 kb on - strand at 6202.871 kb on - strand at 6202.906 kb on + strand at 6202.998 kb on + strand at 6202.998 kb on + strand at 6202.998 kb on + strand at 6202.999 kb on - strand at 6203.046 kb on + strand at 6203.046 kb on + strand at 6203.046 kb on + strand at 6203.046 kb on + strand at 6203.047 kb on - strand at 6203.047 kb on - strand at 6203.047 kb on - strand at 6203.076 kb on + strand at 6203.080 kb on + strand at 6203.080 kb on + strand at 6203.080 kb on + strand at 6203.080 kb on + strand at 6203.080 kb on + strand at 6203.080 kb on + strand at 6203.080 kb on + strand at 6203.080 kb on + strand at 6203.081 kb on - strand at 6203.081 kb on - strand at 6203.081 kb on - strand at 6203.081 kb on - strand at 6203.081 kb on - strand at 6203.081 kb on - strand at 6203.188 kb on + strand, within AO353_28470 at 6203.210 kb on + strand, within AO353_28470 at 6203.210 kb on + strand, within AO353_28470 at 6203.211 kb on - strand, within AO353_28470 at 6203.211 kb on - strand, within AO353_28470 at 6203.211 kb on - strand, within AO353_28470 at 6203.241 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.270 kb on + strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.271 kb on - strand, within AO353_28470 at 6203.459 kb on - strand at 6203.484 kb on + strand at 6203.484 kb on + strand at 6203.484 kb on + strand at 6203.485 kb on - strand at 6203.485 kb on - strand at 6203.485 kb on - strand at 6203.485 kb on - strand at 6203.506 kb on - strand at 6203.506 kb on - strand at 6203.670 kb on + strand, within AO353_28475 at 6203.671 kb on - strand, within AO353_28475 at 6203.673 kb on + strand, within AO353_28475 at 6203.684 kb on + strand, within AO353_28475 at 6203.707 kb on + strand, within AO353_28475 at 6203.756 kb on - strand, within AO353_28475 at 6203.756 kb on - strand, within AO353_28475 at 6203.891 kb on - strand, within AO353_28475 at 6203.944 kb on + strand, within AO353_28475 at 6203.944 kb on + strand, within AO353_28475 at 6203.944 kb on + strand, within AO353_28475 at 6203.945 kb on - strand, within AO353_28475 at 6203.945 kb on - strand, within AO353_28475 at 6203.945 kb on - strand, within AO353_28475 at 6203.949 kb on + strand, within AO353_28475 at 6203.950 kb on - strand, within AO353_28475
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 6,200,872 + AO353_28460 0.37 +1.5 6,201,043 + AO353_28460 0.48 +0.2 6,201,044 - AO353_28460 0.48 -1.2 6,201,117 - AO353_28460 0.52 +0.9 6,201,117 - AO353_28460 0.52 +1.0 6,201,204 + AO353_28460 0.58 -0.2 6,201,204 + AO353_28460 0.58 -0.2 6,201,204 + AO353_28460 0.58 -0.2 6,201,204 + AO353_28460 0.58 +0.9 6,201,204 + AO353_28460 0.58 +0.1 6,201,204 + AO353_28460 0.58 +2.4 6,201,205 - AO353_28460 0.58 -1.2 6,201,205 - AO353_28460 0.58 +0.2 6,201,205 - AO353_28460 0.58 -1.5 6,201,205 - AO353_28460 0.58 -0.2 6,201,205 - AO353_28460 0.58 +3.5 6,201,205 - AO353_28460 0.58 +0.5 6,201,205 - AO353_28460 0.58 -0.2 6,201,205 - AO353_28460 0.58 -0.2 6,201,400 + AO353_28460 0.70 +0.5 6,201,400 + AO353_28460 0.70 +1.0 6,201,401 - AO353_28460 0.70 +2.1 6,201,401 - AO353_28460 0.70 -0.2 6,201,447 - AO353_28460 0.73 +0.8 6,201,447 - AO353_28460 0.73 -1.2 6,201,687 + AO353_28460 0.88 -0.2 6,201,688 - AO353_28460 0.88 -0.0 6,201,688 - AO353_28460 0.88 +0.9 6,201,688 - AO353_28460 0.88 -0.2 6,201,726 + +1.4 6,201,726 + +0.8 6,201,726 + +0.8 6,201,726 + -1.2 6,201,726 + +2.1 6,201,726 + -2.5 6,201,726 + +0.7 6,201,726 + +0.1 6,201,726 + +0.1 6,201,726 + +0.8 6,201,726 + +0.8 6,201,726 + -0.4 6,201,726 + +0.5 6,201,726 + -0.2 6,201,727 - +1.0 6,201,727 - +0.8 6,201,727 - -0.6 6,201,727 - -1.2 6,201,727 - +1.6 6,201,727 - -0.8 6,201,727 - -1.4 6,201,727 - +0.4 6,201,727 - +2.4 6,201,727 - -0.2 6,201,727 - -1.8 6,201,727 - -0.2 6,201,727 - +0.3 6,201,727 - +2.4 6,201,761 + +0.1 6,201,761 + +1.8 6,201,761 + +1.4 6,201,761 + +2.6 6,201,762 - +0.8 6,201,762 - -2.5 6,202,125 + AO353_28465 0.23 -0.8 6,202,125 + AO353_28465 0.23 +0.8 6,202,125 + AO353_28465 0.23 -0.2 6,202,126 - AO353_28465 0.23 -0.8 6,202,126 - AO353_28465 0.23 -0.2 6,202,277 + AO353_28465 0.37 +0.2 6,202,277 + AO353_28465 0.37 -0.8 6,202,278 - AO353_28465 0.37 -0.2 6,202,278 - AO353_28465 0.37 +0.1 6,202,358 + AO353_28465 0.44 +1.4 6,202,358 + AO353_28465 0.44 -0.5 6,202,359 - AO353_28465 0.44 -1.2 6,202,359 - AO353_28465 0.44 -1.8 6,202,359 - AO353_28465 0.44 -1.2 6,202,359 - AO353_28465 0.44 +1.1 6,202,359 - AO353_28465 0.44 -0.2 6,202,359 - AO353_28465 0.44 +1.2 6,202,739 + AO353_28465 0.79 +1.4 6,202,739 + AO353_28465 0.79 -0.6 6,202,784 + AO353_28465 0.83 +1.2 6,202,784 + AO353_28465 0.83 +2.0 6,202,784 + AO353_28465 0.83 +0.8 6,202,784 + AO353_28465 0.83 +0.2 6,202,784 + AO353_28465 0.83 +0.8 6,202,784 + AO353_28465 0.83 +0.1 6,202,785 - AO353_28465 0.83 +0.8 6,202,785 - AO353_28465 0.83 +0.8 6,202,785 - AO353_28465 0.83 +1.8 6,202,785 - AO353_28465 0.83 +0.8 6,202,785 - AO353_28465 0.83 -1.2 6,202,870 + -0.7 6,202,870 + +1.4 6,202,871 - +0.8 6,202,871 - -0.5 6,202,871 - +2.0 6,202,906 + +1.0 6,202,998 + -0.8 6,202,998 + +1.0 6,202,998 + -0.2 6,202,999 - -2.5 6,203,046 + +0.4 6,203,046 + +0.8 6,203,046 + -2.5 6,203,046 + +1.0 6,203,047 - +1.2 6,203,047 - +0.8 6,203,047 - +0.5 6,203,076 + -1.8 6,203,080 + +0.5 6,203,080 + +0.4 6,203,080 + +1.4 6,203,080 + -1.2 6,203,080 + +0.2 6,203,080 + +1.1 6,203,080 + +0.3 6,203,080 + -1.2 6,203,081 - +0.3 6,203,081 - +1.4 6,203,081 - +0.8 6,203,081 - +0.4 6,203,081 - -0.2 6,203,081 - +0.5 6,203,188 + AO353_28470 0.30 +0.4 6,203,210 + AO353_28470 0.35 -1.8 6,203,210 + AO353_28470 0.35 +0.8 6,203,211 - AO353_28470 0.35 +0.5 6,203,211 - AO353_28470 0.35 +0.5 6,203,211 - AO353_28470 0.35 +1.4 6,203,241 + AO353_28470 0.43 -0.2 6,203,270 + AO353_28470 0.50 -1.0 6,203,270 + AO353_28470 0.50 +0.8 6,203,270 + AO353_28470 0.50 +2.3 6,203,270 + AO353_28470 0.50 +1.2 6,203,270 + AO353_28470 0.50 +2.6 6,203,270 + AO353_28470 0.50 +1.1 6,203,270 + AO353_28470 0.50 +1.2 6,203,270 + AO353_28470 0.50 -0.8 6,203,270 + AO353_28470 0.50 -1.2 6,203,271 - AO353_28470 0.50 -1.2 6,203,271 - AO353_28470 0.50 +1.5 6,203,271 - AO353_28470 0.50 -1.8 6,203,271 - AO353_28470 0.50 +1.1 6,203,271 - AO353_28470 0.50 +2.3 6,203,271 - AO353_28470 0.50 -0.2 6,203,271 - AO353_28470 0.50 -0.2 6,203,271 - AO353_28470 0.50 +0.8 6,203,271 - AO353_28470 0.50 +0.4 6,203,271 - AO353_28470 0.50 -0.2 6,203,271 - AO353_28470 0.50 -0.9 6,203,271 - AO353_28470 0.50 +1.8 6,203,271 - AO353_28470 0.50 -1.2 6,203,271 - AO353_28470 0.50 +0.4 6,203,271 - AO353_28470 0.50 +0.8 6,203,459 - -0.2 6,203,484 + -0.2 6,203,484 + -1.5 6,203,484 + -0.2 6,203,485 - +1.5 6,203,485 - -0.4 6,203,485 - +0.8 6,203,485 - +1.0 6,203,506 - +2.0 6,203,506 - -2.5 6,203,670 + AO353_28475 0.14 +0.8 6,203,671 - AO353_28475 0.14 +0.6 6,203,673 + AO353_28475 0.15 +2.1 6,203,684 + AO353_28475 0.16 -0.2 6,203,707 + AO353_28475 0.19 +1.5 6,203,756 - AO353_28475 0.26 +1.6 6,203,756 - AO353_28475 0.26 +1.0 6,203,891 - AO353_28475 0.43 +0.8 6,203,944 + AO353_28475 0.50 -2.5 6,203,944 + AO353_28475 0.50 +1.4 6,203,944 + AO353_28475 0.50 -0.2 6,203,945 - AO353_28475 0.50 -0.2 6,203,945 - AO353_28475 0.50 +0.8 6,203,945 - AO353_28475 0.50 +1.4 6,203,949 + AO353_28475 0.51 -0.9 6,203,950 - AO353_28475 0.51 +1.1
Or see this region's nucleotide sequence