Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26820 and AO353_26825 are separated by 135 nucleotides AO353_26825 and AO353_26830 are separated by 205 nucleotides AO353_26830 and AO353_26835 are separated by 2 nucleotides AO353_26835 and AO353_26840 are separated by 275 nucleotides
AO353_26820: AO353_26820 - histidine kinase, at 5,874,430 to 5,875,824
_26820
AO353_26825: AO353_26825 - bifunctional pyrazinamidase/nicotinamidase, at 5,875,960 to 5,876,598
_26825
AO353_26830: AO353_26830 - histidine kinase, at 5,876,804 to 5,878,105
_26830
AO353_26835: AO353_26835 - transcriptional regulator, at 5,878,108 to 5,878,809
_26835
AO353_26840: AO353_26840 - RND transporter, at 5,879,085 to 5,880,242
_26840
Position (kb)
5876
5877
5878
5879 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5875.822 kb on + strand at 5875.822 kb on + strand at 5875.822 kb on + strand at 5875.825 kb on + strand at 5875.826 kb on - strand at 5875.923 kb on + strand at 5875.923 kb on + strand at 5875.924 kb on - strand at 5875.924 kb on - strand at 5875.924 kb on - strand at 5875.994 kb on + strand at 5875.994 kb on + strand at 5875.994 kb on + strand at 5875.994 kb on + strand at 5875.995 kb on - strand at 5875.995 kb on - strand at 5875.995 kb on - strand at 5875.995 kb on - strand at 5875.995 kb on - strand at 5875.997 kb on + strand at 5875.998 kb on - strand at 5876.009 kb on + strand at 5876.009 kb on + strand at 5876.010 kb on - strand at 5876.176 kb on + strand, within AO353_26825 at 5876.176 kb on + strand at 5876.176 kb on + strand, within AO353_26825 at 5876.176 kb on + strand, within AO353_26825 at 5876.176 kb on + strand, within AO353_26825 at 5876.177 kb on - strand, within AO353_26825 at 5876.177 kb on - strand at 5876.307 kb on + strand, within AO353_26825 at 5876.326 kb on + strand, within AO353_26825 at 5876.326 kb on + strand, within AO353_26825 at 5876.326 kb on + strand, within AO353_26825 at 5876.327 kb on - strand at 5876.327 kb on - strand, within AO353_26825 at 5876.588 kb on + strand at 5876.663 kb on + strand at 5876.691 kb on + strand at 5876.691 kb on + strand at 5876.691 kb on + strand at 5876.691 kb on + strand at 5876.691 kb on + strand at 5876.691 kb on + strand at 5876.691 kb on + strand at 5876.692 kb on - strand at 5876.692 kb on - strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.693 kb on + strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.694 kb on - strand at 5876.775 kb on - strand at 5876.790 kb on + strand at 5876.790 kb on + strand at 5876.791 kb on - strand at 5876.962 kb on - strand, within AO353_26830 at 5877.223 kb on + strand, within AO353_26830 at 5877.224 kb on - strand, within AO353_26830 at 5877.232 kb on + strand, within AO353_26830 at 5877.334 kb on + strand, within AO353_26830 at 5877.334 kb on + strand, within AO353_26830 at 5877.335 kb on - strand, within AO353_26830 at 5877.335 kb on - strand, within AO353_26830 at 5877.335 kb on - strand, within AO353_26830 at 5877.674 kb on + strand, within AO353_26830 at 5877.674 kb on + strand, within AO353_26830 at 5877.675 kb on - strand, within AO353_26830 at 5877.690 kb on + strand, within AO353_26830 at 5877.691 kb on - strand, within AO353_26830 at 5877.691 kb on - strand, within AO353_26830 at 5877.993 kb on + strand at 5877.993 kb on + strand at 5877.994 kb on - strand at 5878.044 kb on + strand at 5878.044 kb on + strand at 5878.044 kb on + strand at 5878.044 kb on + strand at 5878.045 kb on - strand at 5878.045 kb on - strand at 5878.057 kb on + strand at 5878.080 kb on + strand at 5878.291 kb on + strand, within AO353_26835 at 5878.291 kb on + strand, within AO353_26835 at 5878.292 kb on - strand, within AO353_26835 at 5878.292 kb on - strand, within AO353_26835 at 5878.331 kb on + strand, within AO353_26835 at 5878.332 kb on - strand, within AO353_26835 at 5878.332 kb on - strand, within AO353_26835 at 5878.514 kb on + strand, within AO353_26835 at 5878.515 kb on - strand, within AO353_26835 at 5878.895 kb on - strand at 5878.911 kb on + strand at 5878.917 kb on + strand at 5878.917 kb on + strand at 5878.918 kb on - strand at 5878.918 kb on - strand at 5878.918 kb on - strand at 5878.964 kb on + strand at 5878.964 kb on + strand at 5878.964 kb on + strand at 5878.964 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.966 kb on + strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.967 kb on - strand at 5878.988 kb on + strand at 5878.988 kb on + strand at 5878.989 kb on - strand at 5878.989 kb on - strand at 5878.997 kb on + strand at 5878.997 kb on + strand at 5879.018 kb on + strand at 5879.018 kb on + strand at 5879.018 kb on + strand at 5879.019 kb on - strand at 5879.019 kb on - strand at 5879.019 kb on - strand at 5879.019 kb on - strand at 5879.054 kb on - strand at 5879.078 kb on + strand at 5879.078 kb on + strand at 5879.079 kb on - strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.082 kb on + strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand at 5879.083 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,875,822 + -0.3 5,875,822 + -0.3 5,875,822 + -1.8 5,875,825 + +1.7 5,875,826 - +0.6 5,875,923 + +1.3 5,875,923 + -1.0 5,875,924 - -1.3 5,875,924 - -0.8 5,875,924 - -0.3 5,875,994 + -0.8 5,875,994 + +0.0 5,875,994 + +0.7 5,875,994 + -1.8 5,875,995 - +1.3 5,875,995 - +0.7 5,875,995 - -0.7 5,875,995 - -1.3 5,875,995 - +0.1 5,875,997 + -0.3 5,875,998 - +0.9 5,876,009 + +1.3 5,876,009 + +1.6 5,876,010 - -0.3 5,876,176 + AO353_26825 0.34 +0.0 5,876,176 + -1.8 5,876,176 + AO353_26825 0.34 -1.8 5,876,176 + AO353_26825 0.34 +0.3 5,876,176 + AO353_26825 0.34 +1.7 5,876,177 - AO353_26825 0.34 +0.7 5,876,177 - -1.3 5,876,307 + AO353_26825 0.54 -0.6 5,876,326 + AO353_26825 0.57 -0.8 5,876,326 + AO353_26825 0.57 -0.3 5,876,326 + AO353_26825 0.57 -0.4 5,876,327 - -0.3 5,876,327 - AO353_26825 0.57 -0.3 5,876,588 + +1.6 5,876,663 + -0.3 5,876,691 + -0.3 5,876,691 + -0.3 5,876,691 + +0.7 5,876,691 + +0.5 5,876,691 + -0.3 5,876,691 + +0.5 5,876,691 + +0.9 5,876,692 - +0.0 5,876,692 - +1.3 5,876,693 + -1.8 5,876,693 + +1.3 5,876,693 + +1.1 5,876,693 + -0.8 5,876,693 + +2.1 5,876,693 + +2.1 5,876,693 + +1.7 5,876,693 + +0.7 5,876,693 + +1.3 5,876,693 + +1.3 5,876,694 - -0.1 5,876,694 - +0.9 5,876,694 - +0.6 5,876,694 - +0.7 5,876,694 - +0.2 5,876,694 - -0.3 5,876,694 - +0.1 5,876,694 - +1.3 5,876,694 - -1.3 5,876,694 - +0.5 5,876,775 - -0.3 5,876,790 + -0.1 5,876,790 + +0.7 5,876,791 - -0.3 5,876,962 - AO353_26830 0.12 +0.3 5,877,223 + AO353_26830 0.32 +0.7 5,877,224 - AO353_26830 0.32 -0.3 5,877,232 + AO353_26830 0.33 -0.3 5,877,334 + AO353_26830 0.41 -1.3 5,877,334 + AO353_26830 0.41 -0.7 5,877,335 - AO353_26830 0.41 +0.7 5,877,335 - AO353_26830 0.41 -0.3 5,877,335 - AO353_26830 0.41 -2.6 5,877,674 + AO353_26830 0.67 -0.3 5,877,674 + AO353_26830 0.67 -0.6 5,877,675 - AO353_26830 0.67 -2.6 5,877,690 + AO353_26830 0.68 +0.7 5,877,691 - AO353_26830 0.68 -1.6 5,877,691 - AO353_26830 0.68 -0.3 5,877,993 + +0.2 5,877,993 + -0.8 5,877,994 - -1.8 5,878,044 + -1.3 5,878,044 + -0.3 5,878,044 + -2.3 5,878,044 + -0.3 5,878,045 - -1.6 5,878,045 - -1.0 5,878,057 + -0.3 5,878,080 + -0.3 5,878,291 + AO353_26835 0.26 +0.6 5,878,291 + AO353_26835 0.26 +0.7 5,878,292 - AO353_26835 0.26 -0.6 5,878,292 - AO353_26835 0.26 +0.2 5,878,331 + AO353_26835 0.32 +0.7 5,878,332 - AO353_26835 0.32 -1.3 5,878,332 - AO353_26835 0.32 +0.7 5,878,514 + AO353_26835 0.58 +0.7 5,878,515 - AO353_26835 0.58 +0.7 5,878,895 - -0.3 5,878,911 + +0.3 5,878,917 + -2.6 5,878,917 + -0.8 5,878,918 - +0.5 5,878,918 - -0.3 5,878,918 - -0.3 5,878,964 + -1.1 5,878,964 + +0.3 5,878,964 + -0.7 5,878,964 + -1.1 5,878,966 + +2.1 5,878,966 + -0.3 5,878,966 + -0.3 5,878,966 + +1.3 5,878,966 + -0.7 5,878,967 - +0.9 5,878,967 - +0.0 5,878,967 - +0.2 5,878,967 - -0.9 5,878,967 - +1.3 5,878,967 - +1.7 5,878,967 - -0.3 5,878,967 - -1.0 5,878,967 - +1.2 5,878,967 - -0.3 5,878,967 - +2.3 5,878,988 + +1.7 5,878,988 + +0.3 5,878,989 - -0.4 5,878,989 - +0.2 5,878,997 + +1.0 5,878,997 + -0.0 5,879,018 + -0.4 5,879,018 + -2.6 5,879,018 + -1.0 5,879,019 - +1.1 5,879,019 - +1.7 5,879,019 - +0.5 5,879,019 - +0.7 5,879,054 - -0.8 5,879,078 + -0.7 5,879,078 + +1.3 5,879,079 - +0.2 5,879,082 + +0.3 5,879,082 + -2.1 5,879,082 + +0.7 5,879,082 + +0.7 5,879,082 + -0.3 5,879,082 + -1.0 5,879,082 + +1.2 5,879,082 + +2.1 5,879,082 + -0.3 5,879,082 + +1.3 5,879,082 + -0.3 5,879,082 + -0.3 5,879,082 + +0.1 5,879,082 + +2.1 5,879,082 + +2.1 5,879,082 + -1.3 5,879,083 - -1.8 5,879,083 - +0.2 5,879,083 - +2.6 5,879,083 - -0.3 5,879,083 - -0.3 5,879,083 - +0.3 5,879,083 - -0.3 5,879,083 - -1.0 5,879,083 - +1.9 5,879,083 - +1.6 5,879,083 - +0.7 5,879,083 - +1.7 5,879,083 - -0.3 5,879,083 - +0.2 5,879,083 - +1.0 5,879,083 - -0.3 5,879,083 - +0.9 5,879,083 - +0.3
Or see this region's nucleotide sequence