Strain Fitness in Pseudomonas fluorescens FW300-N2E3

Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26440

Experiment: Thallium(I) acetate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	Thallium(I) acetate 0.016 mg/ml
				remove
5,795,014	+	AO353_26430	0.43	+1.1
5,795,014	+	AO353_26430	0.43	-1.9
5,795,014	+	AO353_26430	0.43	-1.3
5,795,014	+	AO353_26430	0.43	+2.2
5,795,014	+	AO353_26430	0.43	-0.3
5,795,015	-	AO353_26430	0.44	+0.7
5,795,063	+	AO353_26430	0.58	+0.9
5,795,064	-	AO353_26430	0.59	+0.7
5,795,073	+	AO353_26430	0.61	-1.9
5,795,074	-			+0.7
5,795,074	-	AO353_26430	0.62	-1.0
5,795,074	-	AO353_26430	0.62	+1.1
5,795,111	+	AO353_26430	0.73	-1.3
5,795,129	+	AO353_26430	0.79	-0.3
5,795,129	+	AO353_26430	0.79	+1.3
5,795,204	+			+0.7
5,795,204	+			+0.1
5,795,204	+			+1.7
5,795,205	-			-0.3
5,795,205	-			+1.4
5,795,205	-			+1.0
5,795,211	+			+0.7
5,795,224	+			-1.3
5,795,224	+			+1.0
5,795,224	+			-2.6
5,795,224	+			+1.0
5,795,225	-			+1.7
5,795,225	-			-0.6
5,795,225	-			+3.0
5,795,225	-			+0.0
5,795,237	+			+2.5
5,795,237	+			+1.3
5,795,238	-			+0.3
5,795,242	-			-0.3
5,795,279	+			-1.7
5,795,279	+			-1.0
5,795,279	+			-0.3
5,795,279	+			-0.3
5,795,280	-			+1.3
5,795,280	-			+2.2
5,795,281	+			+1.3
5,795,281	+			-1.3
5,795,281	+			+1.3
5,795,282	-			+1.2
5,795,282	-			+0.7
5,795,282	-			+1.1
5,795,282	-			-0.3
5,795,282	-			-0.9
5,795,282	-			+0.1
5,795,285	+			+1.7
5,795,285	+			-1.9
5,795,285	+			+1.0
5,795,285	+			+0.0
5,795,286	-			+0.7
5,795,286	-			+2.3
5,795,286	-			+1.7
5,795,286	-			-0.9
5,795,286	-			-0.9
5,795,294	+			+0.1
5,795,295	-	AO353_26435	0.10	+0.4
5,795,297	+	AO353_26435	0.10	+0.7
5,795,298	-	AO353_26435	0.11	+0.7
5,795,298	-	AO353_26435	0.11	-0.9
5,795,333	+	AO353_26435	0.17	+2.0
5,795,333	+	AO353_26435	0.17	-0.3
5,795,333	+	AO353_26435	0.17	-0.3
5,795,333	+	AO353_26435	0.17	-1.0
5,795,334	-	AO353_26435	0.17	+1.3
5,795,359	+	AO353_26435	0.21	-1.3
5,795,359	+	AO353_26435	0.21	+1.9
5,795,360	-	AO353_26435	0.21	+0.1
5,795,365	-	AO353_26435	0.22	+0.0
5,795,400	+	AO353_26435	0.28	-0.3
5,795,400	+	AO353_26435	0.28	-1.3
5,795,400	+	AO353_26435	0.28	-0.3
5,795,401	-	AO353_26435	0.28	-0.3
5,795,410	-	AO353_26435	0.30	-0.3
5,795,434	-	AO353_26435	0.34	-0.0
5,795,469	+	AO353_26435	0.40	+2.5
5,795,470	-	AO353_26435	0.40	+0.7
5,795,470	-	AO353_26435	0.40	+0.3
5,795,470	-	AO353_26435	0.40	+1.9
5,795,470	-	AO353_26435	0.40	+1.9
5,795,514	+	AO353_26435	0.48	+0.0
5,795,514	+	AO353_26435	0.48	+0.3
5,795,515	-	AO353_26435	0.48	-0.7
5,795,515	-	AO353_26435	0.48	+0.5
5,795,515	-	AO353_26435	0.48	+1.3
5,795,515	-	AO353_26435	0.48	+1.0
5,795,563	+	AO353_26435	0.56	+0.7
5,795,564	-	AO353_26435	0.56	+0.1
5,795,582	-	AO353_26435	0.59	+1.5
5,795,582	-			+1.7
5,795,582	-	AO353_26435	0.59	-0.9
5,795,588	-	AO353_26435	0.60	+1.0
5,795,632	+			-0.3
5,795,632	+	AO353_26435	0.68	-0.3
5,795,633	-	AO353_26435	0.68	+0.5
5,795,633	-	AO353_26435	0.68	+0.1
5,795,633	-	AO353_26435	0.68	-0.3
5,795,633	-	AO353_26435	0.68	+0.7
5,795,633	-	AO353_26435	0.68	+0.7
5,795,633	-	AO353_26435	0.68	+0.3
5,795,635	+	AO353_26435	0.69	-0.8
5,795,636	-	AO353_26435	0.69	+1.3
5,795,648	-	AO353_26435	0.71	-0.5
5,795,738	-	AO353_26435	0.86	-0.3
5,795,764	-			+0.5
5,795,860	+			-0.0
5,795,902	+			+0.3
5,795,902	+			+0.5
5,795,902	+			+1.7
5,795,940	+			-0.3
5,795,940	+			+0.7
5,795,941	-			+2.3
5,795,941	-			-0.7
5,795,941	-			+0.7
5,795,941	-			+1.9
5,795,998	+			+1.1
5,795,998	+			+0.3
5,795,999	-			+0.3
5,795,999	-			+0.7
5,796,128	-	AO353_26440	0.44	+0.7
5,796,139	+	AO353_26440	0.47	-0.3
5,796,140	-	AO353_26440	0.47	-0.3
5,796,140	-	AO353_26440	0.47	+0.3
5,796,140	-	AO353_26440	0.47	+1.0
5,796,150	+	AO353_26440	0.51	+0.3
5,796,151	-	AO353_26440	0.51	+1.1
5,796,151	-	AO353_26440	0.51	+2.9
5,796,151	-	AO353_26440	0.51	+1.7
5,796,154	+	AO353_26440	0.52	+0.3
5,796,292	+			-1.3
5,796,292	+			+0.3
5,796,292	+			+0.7
5,796,292	+			-1.3
5,796,293	-			-0.7
5,796,293	-			-0.3
5,796,311	-			-1.7
5,796,311	-			+2.3
5,796,311	-			+0.3
5,796,331	+			+0.1
5,796,332	-			-1.1
5,796,356	+			-1.3
5,796,356	+			+0.7
5,796,356	+			+3.3
5,796,357	-			-0.9
5,796,357	-			-0.6
5,796,413	+			-1.3
5,796,413	+			+0.7
5,796,413	+			+0.3
5,796,414	-			+0.7
5,796,414	-			-0.3
5,796,414	-			-1.3
5,796,424	+			+0.7
5,796,424	+			-0.3
5,796,424	+			+0.7
5,796,425	-			+1.1
5,796,425	-			+0.2
5,796,436	+			+0.1
5,796,436	+			-0.3
5,796,436	+			+1.7
5,796,437	-			+0.3
5,796,437	-			+0.3
5,796,437	-			-1.5
5,796,437	-			+1.3
5,796,452	-			+2.0
5,796,529	+	AO353_26445	0.27	+1.3
5,796,530	-	AO353_26445	0.28	-0.6
5,796,530	-	AO353_26445	0.28	-0.6
5,796,540	-	AO353_26445	0.30	-1.3
5,796,540	-	AO353_26445	0.30	-0.7
5,796,540	-	AO353_26445	0.30	+0.5
5,796,577	+	AO353_26445	0.39	+1.3
5,796,578	-	AO353_26445	0.40	+1.7
5,796,682	+	AO353_26445	0.65	-0.3
5,796,682	+	AO353_26445	0.65	+0.7
5,796,682	+	AO353_26445	0.65	+0.6
5,796,682	+	AO353_26445	0.65	+0.4
5,796,682	+	AO353_26445	0.65	-1.6
5,796,682	+	AO353_26445	0.65	+2.7
5,796,682	+	AO353_26445	0.65	+0.4
5,796,682	+	AO353_26445	0.65	-1.3
5,796,682	+	AO353_26445	0.65	-0.9
5,796,682	+	AO353_26445	0.65	-0.9
5,796,683	-	AO353_26445	0.65	-0.9
5,796,683	-	AO353_26445	0.65	-0.3
5,796,683	-	AO353_26445	0.65	-1.3
5,796,683	-	AO353_26445	0.65	+0.7
5,796,683	-	AO353_26445	0.65	-0.3
5,796,683	-	AO353_26445	0.65	-0.3
5,796,683	-	AO353_26445	0.65	-2.6
5,796,683	-	AO353_26445	0.65	+0.7
5,796,746	-	AO353_26445	0.81	+0.5
5,796,755	-	AO353_26445	0.83	-0.9
5,796,778	+	AO353_26445	0.89	+1.3
5,796,778	+	AO353_26445	0.89	-0.8
5,796,779	-	AO353_26445	0.89	+1.7
5,796,779	-	AO353_26445	0.89	+0.3
5,796,780	+	AO353_26445	0.89	+0.3
5,796,781	-	AO353_26445	0.90	+2.5
5,796,781	-	AO353_26445	0.90	-0.8
5,796,781	-	AO353_26445	0.90	+2.5
5,796,781	-	AO353_26445	0.90	+0.7
5,796,799	+			+0.7
5,796,799	+			+1.3
5,796,800	-			+0.7
5,796,800	-			-0.3
5,796,800	-			-0.3
5,796,800	-			+2.1
5,796,800	-			-0.7
5,796,800	-			+2.1
5,796,835	+			-0.3
5,796,835	+			-1.8
5,796,835	+			+0.3
5,796,835	+			-1.6
5,796,835	+			-0.3
5,796,836	-			-2.3
5,796,836	-			+2.1
5,796,836	-			-0.3
5,796,836	-			+1.2
5,796,836	-			-0.3
5,796,838	+			+0.3
5,796,838	+			+0.3
5,796,854	+			+1.2
5,796,854	+			+2.1
5,796,854	+			-1.8
5,796,854	+			-1.8
5,796,855	-			-0.3
5,796,855	-			-0.3
5,796,858	+	AO353_26450	0.11	-1.3
5,796,858	+	AO353_26450	0.11	-1.5
5,796,858	+	AO353_26450	0.11	-0.4
5,796,877	+	AO353_26450	0.22	-0.8
5,796,878	-	AO353_26450	0.22	+0.6
5,796,878	-	AO353_26450	0.22	-0.3
5,796,878	-	AO353_26450	0.22	+1.3
5,796,878	-	AO353_26450	0.22	-1.8
5,796,878	-			+0.3
5,796,878	-	AO353_26450	0.22	+0.2
5,796,895	-	AO353_26450	0.32	+0.9
5,796,949	-	AO353_26450	0.61	+2.5
5,797,049	+			-0.3
5,797,049	+			+2.5
5,797,049	+			+0.7
5,797,049	+			+0.1
5,797,050	-			+1.2
5,797,050	-			+0.4
5,797,050	-			-1.3
5,797,050	-			-0.3
5,797,057	+			-0.3
5,797,057	+			-1.8
5,797,098	+			-0.5
5,797,098	+			-1.8
5,797,098	+			+0.3
5,797,098	+			+2.7
5,797,099	-			+1.9
5,797,099	-			+0.7
5,797,099	-			-0.7
5,797,108	+			-0.3
5,797,164	+			-0.3
5,797,164	+			-0.3
5,797,164	+			+1.7
5,797,165	-			+0.7
5,797,165	-			+0.2
5,797,165	-			+0.7
5,797,165	-			+1.0
5,797,165	-			-0.3
5,797,165	-			+0.8
5,797,165	-			+1.6
5,797,185	+			+1.1
5,797,298	+	AO353_26455	0.23	-0.5
5,797,298	+	AO353_26455	0.23	-1.7
5,797,298	+	AO353_26455	0.23	+0.5
5,797,298	+	AO353_26455	0.23	-1.8
5,797,298	+	AO353_26455	0.23	+0.7
5,797,298	+	AO353_26455	0.23	+1.3
5,797,298	+	AO353_26455	0.23	+1.3
5,797,298	+	AO353_26455	0.23	-0.3
5,797,299	-	AO353_26455	0.23	+0.5
5,797,299	-	AO353_26455	0.23	-0.3
5,797,299	-	AO353_26455	0.23	-0.8
5,797,299	-	AO353_26455	0.23	+2.3
5,797,299	-	AO353_26455	0.23	+1.0
5,797,300	-	AO353_26455	0.23	+0.6

Or see this region's nucleotide sequence