Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25960 and AO353_25965 are separated by 246 nucleotides AO353_25965 and AO353_25970 are separated by 11 nucleotides
AO353_25960: AO353_25960 - threonine dehydratase, at 5,721,623 to 5,722,630
_25960
AO353_25965: AO353_25965 - hypothetical protein, at 5,722,877 to 5,723,212
_25965
AO353_25970: AO353_25970 - asparaginase, at 5,723,224 to 5,724,264
_25970
Position (kb)
5722
5723
5724 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5721.896 kb on + strand, within AO353_25960 at 5722.017 kb on + strand, within AO353_25960 at 5722.017 kb on + strand, within AO353_25960 at 5722.017 kb on + strand, within AO353_25960 at 5722.018 kb on - strand, within AO353_25960 at 5722.026 kb on + strand, within AO353_25960 at 5722.026 kb on + strand, within AO353_25960 at 5722.203 kb on + strand, within AO353_25960 at 5722.203 kb on + strand, within AO353_25960 at 5722.204 kb on - strand, within AO353_25960 at 5722.204 kb on - strand, within AO353_25960 at 5722.204 kb on - strand, within AO353_25960 at 5722.425 kb on + strand, within AO353_25960 at 5722.425 kb on + strand, within AO353_25960 at 5722.426 kb on - strand, within AO353_25960 at 5722.549 kb on - strand at 5722.549 kb on - strand at 5722.549 kb on - strand at 5722.578 kb on + strand at 5722.579 kb on - strand at 5722.726 kb on - strand at 5722.741 kb on + strand at 5722.741 kb on + strand at 5722.742 kb on - strand at 5722.742 kb on - strand at 5722.789 kb on - strand at 5722.789 kb on - strand at 5722.925 kb on + strand, within AO353_25965 at 5722.928 kb on - strand, within AO353_25965 at 5723.000 kb on - strand, within AO353_25965 at 5723.025 kb on - strand at 5723.057 kb on + strand, within AO353_25965 at 5723.057 kb on + strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.058 kb on - strand, within AO353_25965 at 5723.124 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.150 kb on + strand, within AO353_25965 at 5723.151 kb on - strand, within AO353_25965 at 5723.151 kb on - strand, within AO353_25965 at 5723.226 kb on - strand at 5723.226 kb on - strand at 5723.269 kb on + strand at 5723.269 kb on + strand at 5723.269 kb on + strand at 5723.269 kb on + strand at 5723.270 kb on - strand at 5723.270 kb on - strand at 5723.368 kb on + strand, within AO353_25970 at 5723.368 kb on + strand, within AO353_25970 at 5723.369 kb on - strand, within AO353_25970 at 5723.375 kb on + strand, within AO353_25970 at 5723.375 kb on + strand, within AO353_25970 at 5723.376 kb on - strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.446 kb on + strand, within AO353_25970 at 5723.448 kb on + strand, within AO353_25970 at 5723.459 kb on + strand, within AO353_25970 at 5723.459 kb on + strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.460 kb on - strand, within AO353_25970 at 5723.520 kb on + strand, within AO353_25970 at 5723.521 kb on - strand, within AO353_25970 at 5723.521 kb on - strand at 5723.555 kb on + strand at 5723.555 kb on + strand, within AO353_25970 at 5723.555 kb on + strand, within AO353_25970 at 5723.555 kb on + strand, within AO353_25970 at 5723.556 kb on - strand, within AO353_25970 at 5723.556 kb on - strand, within AO353_25970 at 5723.638 kb on + strand, within AO353_25970 at 5723.639 kb on - strand, within AO353_25970 at 5723.639 kb on - strand, within AO353_25970 at 5723.795 kb on + strand, within AO353_25970 at 5723.850 kb on + strand, within AO353_25970 at 5723.850 kb on + strand at 5724.001 kb on - strand, within AO353_25970 at 5724.018 kb on + strand, within AO353_25970 at 5724.019 kb on - strand, within AO353_25970 at 5724.019 kb on - strand, within AO353_25970 at 5724.019 kb on - strand, within AO353_25970
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,721,896 + AO353_25960 0.27 -0.3 5,722,017 + AO353_25960 0.39 +1.3 5,722,017 + AO353_25960 0.39 -0.6 5,722,017 + AO353_25960 0.39 -0.0 5,722,018 - AO353_25960 0.39 -1.1 5,722,026 + AO353_25960 0.40 -1.0 5,722,026 + AO353_25960 0.40 +1.2 5,722,203 + AO353_25960 0.58 -0.6 5,722,203 + AO353_25960 0.58 +1.1 5,722,204 - AO353_25960 0.58 -0.0 5,722,204 - AO353_25960 0.58 +0.7 5,722,204 - AO353_25960 0.58 -0.3 5,722,425 + AO353_25960 0.80 -0.6 5,722,425 + AO353_25960 0.80 -1.9 5,722,426 - AO353_25960 0.80 -0.1 5,722,549 - +0.0 5,722,549 - -0.3 5,722,549 - -0.9 5,722,578 + -0.3 5,722,579 - -0.3 5,722,726 - -0.6 5,722,741 + -0.9 5,722,741 + +0.7 5,722,742 - +0.0 5,722,742 - -1.3 5,722,789 - +0.1 5,722,789 - +0.0 5,722,925 + AO353_25965 0.14 +0.0 5,722,928 - AO353_25965 0.15 -0.3 5,723,000 - AO353_25965 0.37 -1.3 5,723,025 - -0.3 5,723,057 + AO353_25965 0.54 +0.0 5,723,057 + AO353_25965 0.54 -1.3 5,723,058 - AO353_25965 0.54 +0.4 5,723,058 - AO353_25965 0.54 -0.3 5,723,058 - AO353_25965 0.54 +0.0 5,723,058 - AO353_25965 0.54 -0.3 5,723,124 + AO353_25965 0.74 -2.9 5,723,150 + AO353_25965 0.81 -0.7 5,723,150 + AO353_25965 0.81 +0.1 5,723,150 + AO353_25965 0.81 -0.9 5,723,150 + AO353_25965 0.81 +0.3 5,723,150 + AO353_25965 0.81 -1.3 5,723,151 - AO353_25965 0.82 -0.3 5,723,151 - AO353_25965 0.82 -0.9 5,723,226 - -0.3 5,723,226 - -0.3 5,723,269 + -0.2 5,723,269 + +0.7 5,723,269 + +1.7 5,723,269 + -0.3 5,723,270 - +0.3 5,723,270 - +1.7 5,723,368 + AO353_25970 0.14 +1.3 5,723,368 + AO353_25970 0.14 -0.3 5,723,369 - AO353_25970 0.14 -1.9 5,723,375 + AO353_25970 0.15 +0.3 5,723,375 + AO353_25970 0.15 +0.3 5,723,376 - AO353_25970 0.15 -1.3 5,723,446 + AO353_25970 0.21 -0.3 5,723,446 + AO353_25970 0.21 +0.1 5,723,446 + AO353_25970 0.21 +0.8 5,723,446 + AO353_25970 0.21 +0.7 5,723,448 + AO353_25970 0.22 -0.3 5,723,459 + AO353_25970 0.23 +1.4 5,723,459 + AO353_25970 0.23 +2.2 5,723,460 - AO353_25970 0.23 +1.0 5,723,460 - AO353_25970 0.23 +1.9 5,723,460 - AO353_25970 0.23 +0.1 5,723,460 - AO353_25970 0.23 -0.7 5,723,460 - AO353_25970 0.23 +0.4 5,723,520 + AO353_25970 0.28 +1.7 5,723,521 - AO353_25970 0.29 +2.0 5,723,521 - -1.3 5,723,555 + +0.3 5,723,555 + AO353_25970 0.32 -0.3 5,723,555 + AO353_25970 0.32 +0.3 5,723,555 + AO353_25970 0.32 +0.7 5,723,556 - AO353_25970 0.32 +0.0 5,723,556 - AO353_25970 0.32 +0.7 5,723,638 + AO353_25970 0.40 +1.9 5,723,639 - AO353_25970 0.40 -0.6 5,723,639 - AO353_25970 0.40 +0.1 5,723,795 + AO353_25970 0.55 -0.7 5,723,850 + AO353_25970 0.60 +1.7 5,723,850 + -0.3 5,724,001 - AO353_25970 0.75 +1.7 5,724,018 + AO353_25970 0.76 -0.3 5,724,019 - AO353_25970 0.76 +2.7 5,724,019 - AO353_25970 0.76 +2.3 5,724,019 - AO353_25970 0.76 +0.7
Or see this region's nucleotide sequence