Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24985 and AO353_24990 overlap by 4 nucleotides AO353_24990 and AO353_24995 are separated by 6 nucleotides AO353_24995 and AO353_25000 are separated by 59 nucleotides
AO353_24985: AO353_24985 - L-seryl-tRNA(Sec) selenium transferase, at 5,510,587 to 5,512,017
_24985
AO353_24990: AO353_24990 - translation elongation factor, at 5,512,014 to 5,513,933
_24990
AO353_24995: AO353_24995 - tRNA-Sec, at 5,513,940 to 5,514,035
_24995
AO353_25000: AO353_25000 - magnesium transporter, at 5,514,095 to 5,515,108
_25000
Position (kb)
5512
5513
5514 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5511.267 kb on - strand, within AO353_24985 at 5511.281 kb on - strand, within AO353_24985 at 5511.351 kb on - strand, within AO353_24985 at 5511.613 kb on + strand, within AO353_24985 at 5511.726 kb on - strand, within AO353_24985 at 5512.182 kb on - strand at 5512.182 kb on - strand at 5513.164 kb on + strand, within AO353_24990 at 5513.164 kb on + strand, within AO353_24990 at 5513.165 kb on - strand, within AO353_24990 at 5513.187 kb on - strand, within AO353_24990 at 5513.509 kb on + strand, within AO353_24990 at 5513.677 kb on + strand, within AO353_24990 at 5513.713 kb on - strand, within AO353_24990 at 5513.745 kb on - strand at 5513.745 kb on - strand at 5513.837 kb on - strand at 5513.837 kb on - strand at 5514.138 kb on + strand at 5514.138 kb on + strand at 5514.138 kb on + strand at 5514.138 kb on + strand at 5514.139 kb on - strand at 5514.139 kb on - strand at 5514.543 kb on - strand, within AO353_25000 at 5514.543 kb on - strand, within AO353_25000 at 5514.564 kb on + strand, within AO353_25000 at 5514.564 kb on + strand, within AO353_25000 at 5514.564 kb on + strand, within AO353_25000 at 5514.565 kb on - strand, within AO353_25000 at 5514.639 kb on + strand, within AO353_25000 at 5514.727 kb on - strand, within AO353_25000 at 5514.727 kb on - strand, within AO353_25000 at 5514.727 kb on - strand, within AO353_25000
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,511,267 - AO353_24985 0.48 +0.5 5,511,281 - AO353_24985 0.48 -0.9 5,511,351 - AO353_24985 0.53 +1.3 5,511,613 + AO353_24985 0.72 +0.1 5,511,726 - AO353_24985 0.80 +0.6 5,512,182 - -0.6 5,512,182 - +0.3 5,513,164 + AO353_24990 0.60 +0.5 5,513,164 + AO353_24990 0.60 +2.7 5,513,165 - AO353_24990 0.60 +0.7 5,513,187 - AO353_24990 0.61 +0.7 5,513,509 + AO353_24990 0.78 +1.3 5,513,677 + AO353_24990 0.87 -1.3 5,513,713 - AO353_24990 0.88 +0.2 5,513,745 - -0.3 5,513,745 - -1.2 5,513,837 - -0.6 5,513,837 - +0.1 5,514,138 + +0.9 5,514,138 + -1.9 5,514,138 + -0.5 5,514,138 + -0.3 5,514,139 - +0.0 5,514,139 - +1.4 5,514,543 - AO353_25000 0.44 +1.7 5,514,543 - AO353_25000 0.44 +1.3 5,514,564 + AO353_25000 0.46 -0.3 5,514,564 + AO353_25000 0.46 +1.5 5,514,564 + AO353_25000 0.46 +0.1 5,514,565 - AO353_25000 0.46 +1.0 5,514,639 + AO353_25000 0.54 -0.3 5,514,727 - AO353_25000 0.62 +1.5 5,514,727 - AO353_25000 0.62 +2.0 5,514,727 - AO353_25000 0.62 +0.4
Or see this region's nucleotide sequence