Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24865 and AO353_24870 are separated by 803 nucleotides AO353_24870 and AO353_24875 are separated by 25 nucleotides AO353_24875 and AO353_24880 are separated by 5 nucleotides
AO353_24865: AO353_24865 - twin-arginine translocation pathway signal protein, at 5,484,680 to 5,485,240
_24865
AO353_24870: AO353_24870 - hypothetical protein, at 5,486,044 to 5,486,505
_24870
AO353_24875: AO353_24875 - histidine kinase, at 5,486,531 to 5,487,358
_24875
AO353_24880: AO353_24880 - Crp/Fnr family transcriptional regulator, at 5,487,364 to 5,488,059
_24880
Position (kb)
5486
5487 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.052 kb on + strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.053 kb on - strand, within AO353_24865 at 5485.056 kb on + strand at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.056 kb on + strand, within AO353_24865 at 5485.057 kb on - strand, within AO353_24865 at 5485.057 kb on - strand, within AO353_24865 at 5485.057 kb on - strand, within AO353_24865 at 5485.057 kb on - strand, within AO353_24865 at 5485.057 kb on - strand, within AO353_24865 at 5485.057 kb on - strand, within AO353_24865 at 5485.160 kb on + strand, within AO353_24865 at 5485.160 kb on + strand, within AO353_24865 at 5485.160 kb on + strand, within AO353_24865 at 5485.161 kb on - strand, within AO353_24865 at 5485.161 kb on - strand, within AO353_24865 at 5485.161 kb on - strand, within AO353_24865 at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.252 kb on + strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.253 kb on - strand at 5485.276 kb on + strand at 5485.302 kb on - strand at 5485.344 kb on + strand at 5485.346 kb on + strand at 5485.346 kb on + strand at 5485.378 kb on + strand at 5485.379 kb on - strand at 5485.390 kb on + strand at 5485.390 kb on + strand at 5485.391 kb on - strand at 5485.391 kb on - strand at 5485.391 kb on - strand at 5485.395 kb on + strand at 5485.395 kb on + strand at 5485.396 kb on - strand at 5485.396 kb on - strand at 5485.396 kb on - strand at 5485.396 kb on - strand at 5485.396 kb on - strand at 5485.404 kb on + strand at 5485.423 kb on - strand at 5485.445 kb on + strand at 5485.455 kb on + strand at 5485.456 kb on - strand at 5485.517 kb on + strand at 5485.517 kb on + strand at 5485.526 kb on + strand at 5485.526 kb on + strand at 5485.580 kb on + strand at 5485.581 kb on - strand at 5485.581 kb on - strand at 5485.581 kb on - strand at 5485.581 kb on - strand at 5485.581 kb on - strand at 5485.613 kb on - strand at 5485.651 kb on + strand at 5485.651 kb on + strand at 5485.651 kb on + strand at 5485.651 kb on + strand at 5485.652 kb on - strand at 5485.652 kb on - strand at 5485.652 kb on - strand at 5485.652 kb on - strand at 5485.652 kb on - strand at 5485.666 kb on - strand at 5485.675 kb on - strand at 5485.748 kb on - strand at 5485.788 kb on + strand at 5485.788 kb on + strand at 5485.789 kb on - strand at 5485.789 kb on - strand at 5485.789 kb on - strand at 5485.789 kb on - strand at 5485.789 kb on - strand at 5485.789 kb on - strand at 5485.789 kb on - strand at 5485.859 kb on + strand at 5485.860 kb on - strand at 5485.878 kb on + strand at 5485.914 kb on + strand at 5485.918 kb on - strand at 5486.017 kb on + strand at 5486.017 kb on + strand at 5486.018 kb on - strand at 5486.043 kb on + strand at 5486.055 kb on + strand at 5486.261 kb on - strand, within AO353_24870 at 5486.302 kb on + strand, within AO353_24870 at 5486.302 kb on + strand, within AO353_24870 at 5486.302 kb on + strand, within AO353_24870 at 5486.302 kb on + strand, within AO353_24870 at 5486.302 kb on + strand, within AO353_24870 at 5486.302 kb on + strand, within AO353_24870 at 5486.303 kb on - strand, within AO353_24870 at 5486.343 kb on + strand, within AO353_24870 at 5486.407 kb on + strand, within AO353_24870 at 5486.407 kb on + strand, within AO353_24870 at 5486.408 kb on - strand, within AO353_24870 at 5486.466 kb on + strand at 5486.466 kb on + strand at 5486.466 kb on + strand at 5486.467 kb on - strand at 5486.504 kb on - strand at 5486.519 kb on - strand at 5486.630 kb on + strand, within AO353_24875 at 5486.630 kb on + strand, within AO353_24875 at 5486.630 kb on + strand, within AO353_24875 at 5486.630 kb on + strand, within AO353_24875 at 5486.631 kb on - strand, within AO353_24875 at 5486.631 kb on - strand, within AO353_24875 at 5486.631 kb on - strand, within AO353_24875 at 5486.811 kb on + strand, within AO353_24875 at 5486.811 kb on + strand, within AO353_24875 at 5486.811 kb on + strand, within AO353_24875 at 5486.812 kb on - strand, within AO353_24875 at 5486.823 kb on + strand, within AO353_24875 at 5486.823 kb on + strand, within AO353_24875 at 5486.823 kb on + strand, within AO353_24875 at 5486.824 kb on - strand, within AO353_24875 at 5486.824 kb on - strand, within AO353_24875 at 5486.824 kb on - strand, within AO353_24875 at 5487.049 kb on + strand, within AO353_24875 at 5487.049 kb on + strand, within AO353_24875 at 5487.050 kb on - strand, within AO353_24875 at 5487.050 kb on - strand, within AO353_24875 at 5487.235 kb on + strand, within AO353_24875 at 5487.236 kb on - strand, within AO353_24875 at 5487.313 kb on - strand at 5487.325 kb on + strand at 5487.325 kb on + strand at 5487.326 kb on - strand at 5487.326 kb on - strand at 5487.356 kb on + strand at 5487.367 kb on + strand at 5487.392 kb on + strand at 5487.392 kb on + strand at 5487.392 kb on + strand at 5487.392 kb on + strand at 5487.392 kb on + strand at 5487.393 kb on - strand at 5487.393 kb on - strand at 5487.393 kb on - strand at 5487.393 kb on - strand at 5487.393 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,485,052 + AO353_24865 0.66 +0.7 5,485,052 + AO353_24865 0.66 -1.3 5,485,052 + AO353_24865 0.66 -0.6 5,485,052 + AO353_24865 0.66 +0.4 5,485,052 + AO353_24865 0.66 +0.9 5,485,052 + AO353_24865 0.66 -1.3 5,485,052 + AO353_24865 0.66 +0.2 5,485,052 + AO353_24865 0.66 -1.9 5,485,052 + AO353_24865 0.66 -1.6 5,485,053 - AO353_24865 0.66 -0.3 5,485,053 - AO353_24865 0.66 +0.3 5,485,053 - AO353_24865 0.66 -1.3 5,485,053 - AO353_24865 0.66 +0.4 5,485,053 - AO353_24865 0.66 +2.0 5,485,053 - AO353_24865 0.66 -1.9 5,485,053 - AO353_24865 0.66 -1.3 5,485,053 - AO353_24865 0.66 -0.3 5,485,053 - AO353_24865 0.66 +0.3 5,485,053 - AO353_24865 0.66 +0.3 5,485,053 - AO353_24865 0.66 +0.7 5,485,056 + +2.7 5,485,056 + AO353_24865 0.67 +1.0 5,485,056 + AO353_24865 0.67 +0.7 5,485,056 + AO353_24865 0.67 +1.2 5,485,056 + AO353_24865 0.67 -1.6 5,485,056 + AO353_24865 0.67 -1.3 5,485,056 + AO353_24865 0.67 +0.1 5,485,056 + AO353_24865 0.67 -0.3 5,485,056 + AO353_24865 0.67 +1.3 5,485,056 + AO353_24865 0.67 +0.4 5,485,057 - AO353_24865 0.67 -1.3 5,485,057 - AO353_24865 0.67 +0.1 5,485,057 - AO353_24865 0.67 -0.3 5,485,057 - AO353_24865 0.67 -0.3 5,485,057 - AO353_24865 0.67 +0.7 5,485,057 - AO353_24865 0.67 -0.3 5,485,160 + AO353_24865 0.86 +0.3 5,485,160 + AO353_24865 0.86 -1.3 5,485,160 + AO353_24865 0.86 +0.3 5,485,161 - AO353_24865 0.86 -2.3 5,485,161 - AO353_24865 0.86 -0.6 5,485,161 - AO353_24865 0.86 +1.6 5,485,252 + +1.3 5,485,252 + -0.3 5,485,252 + +1.1 5,485,252 + -1.3 5,485,252 + -0.6 5,485,252 + +1.3 5,485,252 + +0.7 5,485,252 + -0.3 5,485,252 + +1.5 5,485,252 + -0.8 5,485,252 + +0.6 5,485,253 - -1.3 5,485,253 - +0.3 5,485,253 - -1.3 5,485,253 - -0.9 5,485,253 - -0.3 5,485,253 - -0.3 5,485,253 - +1.3 5,485,253 - +0.1 5,485,253 - +2.3 5,485,276 + -0.3 5,485,302 - +0.4 5,485,344 + +1.2 5,485,346 + +2.3 5,485,346 + +0.1 5,485,378 + +0.7 5,485,379 - +0.0 5,485,390 + +3.0 5,485,390 + +0.5 5,485,391 - -1.0 5,485,391 - -0.3 5,485,391 - +0.1 5,485,395 + +1.0 5,485,395 + +1.0 5,485,396 - +0.5 5,485,396 - -2.3 5,485,396 - -0.0 5,485,396 - +1.0 5,485,396 - +0.0 5,485,404 + -0.3 5,485,423 - -1.3 5,485,445 + -0.3 5,485,455 + +0.7 5,485,456 - -0.3 5,485,517 + +0.7 5,485,517 + +0.6 5,485,526 + +0.7 5,485,526 + +1.0 5,485,580 + -1.7 5,485,581 - +2.6 5,485,581 - +0.0 5,485,581 - -0.3 5,485,581 - +2.0 5,485,581 - +1.0 5,485,613 - -0.3 5,485,651 + -0.7 5,485,651 + +0.1 5,485,651 + -0.3 5,485,651 + -0.9 5,485,652 - +1.3 5,485,652 - +1.0 5,485,652 - -1.1 5,485,652 - +0.3 5,485,652 - +1.1 5,485,666 - -0.3 5,485,675 - +1.0 5,485,748 - -0.3 5,485,788 + +0.7 5,485,788 + -0.3 5,485,789 - +0.7 5,485,789 - +0.9 5,485,789 - -0.1 5,485,789 - +0.7 5,485,789 - -0.3 5,485,789 - -1.3 5,485,789 - +1.0 5,485,859 + -0.3 5,485,860 - +1.3 5,485,878 + -1.6 5,485,914 + -1.6 5,485,918 - -0.3 5,486,017 + +1.7 5,486,017 + +2.0 5,486,018 - +0.3 5,486,043 + +1.3 5,486,055 + -1.3 5,486,261 - AO353_24870 0.47 +0.7 5,486,302 + AO353_24870 0.56 -2.0 5,486,302 + AO353_24870 0.56 +1.5 5,486,302 + AO353_24870 0.56 +1.3 5,486,302 + AO353_24870 0.56 +1.3 5,486,302 + AO353_24870 0.56 -2.3 5,486,302 + AO353_24870 0.56 +0.7 5,486,303 - AO353_24870 0.56 +1.7 5,486,343 + AO353_24870 0.65 +0.7 5,486,407 + AO353_24870 0.79 +1.4 5,486,407 + AO353_24870 0.79 -0.3 5,486,408 - AO353_24870 0.79 +1.7 5,486,466 + +0.3 5,486,466 + -0.3 5,486,466 + +0.7 5,486,467 - -0.3 5,486,504 - +2.0 5,486,519 - -0.3 5,486,630 + AO353_24875 0.12 +0.3 5,486,630 + AO353_24875 0.12 +3.0 5,486,630 + AO353_24875 0.12 +1.1 5,486,630 + AO353_24875 0.12 +0.9 5,486,631 - AO353_24875 0.12 +0.9 5,486,631 - AO353_24875 0.12 -1.3 5,486,631 - AO353_24875 0.12 +1.3 5,486,811 + AO353_24875 0.34 +0.4 5,486,811 + AO353_24875 0.34 -1.9 5,486,811 + AO353_24875 0.34 +0.4 5,486,812 - AO353_24875 0.34 +1.9 5,486,823 + AO353_24875 0.35 -1.9 5,486,823 + AO353_24875 0.35 +1.7 5,486,823 + AO353_24875 0.35 -0.3 5,486,824 - AO353_24875 0.35 +0.4 5,486,824 - AO353_24875 0.35 +0.7 5,486,824 - AO353_24875 0.35 +0.9 5,487,049 + AO353_24875 0.63 +0.4 5,487,049 + AO353_24875 0.63 +1.7 5,487,050 - AO353_24875 0.63 +0.7 5,487,050 - AO353_24875 0.63 +0.3 5,487,235 + AO353_24875 0.85 +1.1 5,487,236 - AO353_24875 0.85 -1.5 5,487,313 - +0.3 5,487,325 + +2.0 5,487,325 + +0.7 5,487,326 - -0.3 5,487,326 - +2.5 5,487,356 + -0.3 5,487,367 + -0.9 5,487,392 + +1.6 5,487,392 + -1.3 5,487,392 + +0.5 5,487,392 + +0.0 5,487,392 + +1.0 5,487,393 - +0.1 5,487,393 - -1.0 5,487,393 - -1.3 5,487,393 - -0.3 5,487,393 - +1.7
Or see this region's nucleotide sequence