Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24845 and AO353_24850 are separated by 60 nucleotides AO353_24850 and AO353_24855 overlap by 8 nucleotides
AO353_24845: AO353_24845 - decarboxylase, at 5,479,283 to 5,480,890
_24845
AO353_24850: AO353_24850 - aspartate aminotransferase, at 5,480,951 to 5,482,141
_24850
AO353_24855: AO353_24855 - aldehyde dehydrogenase, at 5,482,134 to 5,483,549
_24855
Position (kb)
5480
5481
5482
5483 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5480.058 kb on + strand, within AO353_24845 at 5480.058 kb on + strand, within AO353_24845 at 5480.059 kb on - strand, within AO353_24845 at 5480.059 kb on - strand, within AO353_24845 at 5480.444 kb on + strand, within AO353_24845 at 5480.444 kb on + strand, within AO353_24845 at 5480.445 kb on - strand, within AO353_24845 at 5480.445 kb on - strand, within AO353_24845 at 5480.456 kb on + strand, within AO353_24845 at 5480.456 kb on + strand, within AO353_24845 at 5480.456 kb on + strand, within AO353_24845 at 5480.456 kb on + strand, within AO353_24845 at 5480.457 kb on - strand, within AO353_24845 at 5480.457 kb on - strand, within AO353_24845 at 5480.603 kb on + strand, within AO353_24845 at 5480.603 kb on + strand, within AO353_24845 at 5480.935 kb on - strand at 5480.977 kb on + strand at 5480.977 kb on + strand at 5480.978 kb on - strand at 5480.978 kb on - strand at 5481.326 kb on + strand, within AO353_24850 at 5481.326 kb on + strand, within AO353_24850 at 5481.327 kb on - strand, within AO353_24850 at 5481.327 kb on - strand, within AO353_24850 at 5481.335 kb on + strand, within AO353_24850 at 5481.336 kb on - strand, within AO353_24850 at 5481.336 kb on - strand, within AO353_24850 at 5481.336 kb on - strand, within AO353_24850 at 5481.336 kb on - strand, within AO353_24850 at 5481.336 kb on - strand, within AO353_24850 at 5481.336 kb on - strand, within AO353_24850 at 5481.569 kb on + strand, within AO353_24850 at 5481.570 kb on - strand, within AO353_24850 at 5481.752 kb on + strand, within AO353_24850 at 5481.752 kb on + strand, within AO353_24850 at 5481.752 kb on + strand, within AO353_24850 at 5481.752 kb on + strand, within AO353_24850 at 5481.753 kb on - strand, within AO353_24850 at 5481.753 kb on - strand, within AO353_24850 at 5482.039 kb on + strand at 5482.139 kb on + strand at 5482.139 kb on + strand at 5482.139 kb on + strand at 5482.139 kb on + strand at 5482.140 kb on - strand at 5482.140 kb on - strand at 5482.140 kb on - strand at 5482.140 kb on - strand at 5482.140 kb on - strand at 5482.143 kb on + strand at 5482.144 kb on - strand at 5482.144 kb on - strand at 5482.144 kb on - strand at 5482.144 kb on - strand at 5482.144 kb on - strand at 5482.144 kb on - strand at 5482.289 kb on + strand, within AO353_24855 at 5482.290 kb on - strand, within AO353_24855 at 5482.290 kb on - strand, within AO353_24855 at 5482.290 kb on - strand, within AO353_24855 at 5482.473 kb on + strand, within AO353_24855 at 5482.473 kb on + strand, within AO353_24855 at 5482.473 kb on + strand, within AO353_24855 at 5482.474 kb on - strand, within AO353_24855 at 5482.474 kb on - strand, within AO353_24855 at 5482.474 kb on - strand, within AO353_24855 at 5482.474 kb on - strand, within AO353_24855 at 5482.878 kb on - strand, within AO353_24855 at 5483.118 kb on - strand, within AO353_24855 at 5483.118 kb on - strand, within AO353_24855 at 5483.130 kb on + strand, within AO353_24855 at 5483.131 kb on - strand, within AO353_24855 at 5483.131 kb on - strand, within AO353_24855 at 5483.131 kb on - strand, within AO353_24855
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,480,058 + AO353_24845 0.48 +0.7 5,480,058 + AO353_24845 0.48 +0.0 5,480,059 - AO353_24845 0.48 +2.5 5,480,059 - AO353_24845 0.48 -1.3 5,480,444 + AO353_24845 0.72 -0.3 5,480,444 + AO353_24845 0.72 -0.3 5,480,445 - AO353_24845 0.72 +2.9 5,480,445 - AO353_24845 0.72 -0.1 5,480,456 + AO353_24845 0.73 -0.0 5,480,456 + AO353_24845 0.73 -1.3 5,480,456 + AO353_24845 0.73 -0.0 5,480,456 + AO353_24845 0.73 +2.2 5,480,457 - AO353_24845 0.73 -2.9 5,480,457 - AO353_24845 0.73 +1.3 5,480,603 + AO353_24845 0.82 -1.3 5,480,603 + AO353_24845 0.82 -0.5 5,480,935 - +0.1 5,480,977 + +0.3 5,480,977 + -1.0 5,480,978 - -0.6 5,480,978 - +1.0 5,481,326 + AO353_24850 0.31 +0.7 5,481,326 + AO353_24850 0.31 +1.0 5,481,327 - AO353_24850 0.32 +0.3 5,481,327 - AO353_24850 0.32 +1.7 5,481,335 + AO353_24850 0.32 +2.7 5,481,336 - AO353_24850 0.32 +0.4 5,481,336 - AO353_24850 0.32 +0.1 5,481,336 - AO353_24850 0.32 +1.3 5,481,336 - AO353_24850 0.32 -1.9 5,481,336 - AO353_24850 0.32 -0.7 5,481,336 - AO353_24850 0.32 +1.7 5,481,569 + AO353_24850 0.52 +1.3 5,481,570 - AO353_24850 0.52 +1.3 5,481,752 + AO353_24850 0.67 +1.3 5,481,752 + AO353_24850 0.67 -0.5 5,481,752 + AO353_24850 0.67 -0.3 5,481,752 + AO353_24850 0.67 +1.3 5,481,753 - AO353_24850 0.67 +0.4 5,481,753 - AO353_24850 0.67 -1.9 5,482,039 + +0.4 5,482,139 + +0.3 5,482,139 + +1.5 5,482,139 + +1.7 5,482,139 + +1.0 5,482,140 - -0.3 5,482,140 - -0.3 5,482,140 - +1.1 5,482,140 - +1.7 5,482,140 - +1.7 5,482,143 + +1.4 5,482,144 - -2.3 5,482,144 - +0.9 5,482,144 - -0.6 5,482,144 - +0.8 5,482,144 - +0.1 5,482,144 - -0.3 5,482,289 + AO353_24855 0.11 +1.5 5,482,290 - AO353_24855 0.11 -0.1 5,482,290 - AO353_24855 0.11 +0.3 5,482,290 - AO353_24855 0.11 +1.4 5,482,473 + AO353_24855 0.24 +0.2 5,482,473 + AO353_24855 0.24 +1.9 5,482,473 + AO353_24855 0.24 +1.7 5,482,474 - AO353_24855 0.24 -0.3 5,482,474 - AO353_24855 0.24 +2.7 5,482,474 - AO353_24855 0.24 +0.3 5,482,474 - AO353_24855 0.24 +0.4 5,482,878 - AO353_24855 0.53 -0.3 5,483,118 - AO353_24855 0.69 +0.7 5,483,118 - AO353_24855 0.69 +1.7 5,483,130 + AO353_24855 0.70 -0.5 5,483,131 - AO353_24855 0.70 +1.7 5,483,131 - AO353_24855 0.70 +0.1 5,483,131 - AO353_24855 0.70 +1.3
Or see this region's nucleotide sequence