Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24030

Experiment: Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_24025 and AO353_24030 overlap by 7 nucleotidesAO353_24030 and AO353_24035 are separated by 50 nucleotidesAO353_24035 and AO353_24040 overlap by 4 nucleotides AO353_24025: AO353_24025 - ABC transporter ATP-binding protein, at 5,283,272 to 5,285,062 _24025 AO353_24030: AO353_24030 - ABC transporter ATP-binding protein, at 5,285,056 to 5,286,825 _24030 AO353_24035: AO353_24035 - iron ABC transporter permease, at 5,286,876 to 5,287,766 _24035 AO353_24040: AO353_24040 - iron ABC transporter permease, at 5,287,763 to 5,288,713 _24040 Position (kb) 5285 5286 5287Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 5284.196 kb on + strand, within AO353_24025at 5284.196 kb on + strand, within AO353_24025at 5284.197 kb on - strand, within AO353_24025at 5284.197 kb on - strand, within AO353_24025at 5284.299 kb on + strand, within AO353_24025at 5284.337 kb on + strand, within AO353_24025at 5284.337 kb on + strand, within AO353_24025at 5284.337 kb on + strand, within AO353_24025at 5284.338 kb on - strand, within AO353_24025at 5284.338 kb on - strand, within AO353_24025at 5284.338 kb on - strand, within AO353_24025at 5284.339 kb on + strand, within AO353_24025at 5284.339 kb on + strand, within AO353_24025at 5284.339 kb on + strand, within AO353_24025at 5284.339 kb on + strand, within AO353_24025at 5284.339 kb on + strand, within AO353_24025at 5284.340 kb on - strand, within AO353_24025at 5284.340 kb on - strand, within AO353_24025at 5284.340 kb on - strand, within AO353_24025at 5284.340 kb on - strand, within AO353_24025at 5284.343 kb on + strand, within AO353_24025at 5284.343 kb on + strand, within AO353_24025at 5284.343 kb on + strand, within AO353_24025at 5284.343 kb on + strand, within AO353_24025at 5284.344 kb on - strand, within AO353_24025at 5284.344 kb on - strand, within AO353_24025at 5284.344 kb on - strand, within AO353_24025at 5284.344 kb on - strand, within AO353_24025at 5284.344 kb on - strand, within AO353_24025at 5284.489 kb on + strand, within AO353_24025at 5284.660 kb on + strand, within AO353_24025at 5284.661 kb on - strand, within AO353_24025at 5284.661 kb on - strandat 5284.740 kb on + strand, within AO353_24025at 5284.741 kb on - strand, within AO353_24025at 5285.070 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.116 kb on + strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.117 kb on - strandat 5285.118 kb on + strandat 5285.118 kb on + strandat 5285.118 kb on + strandat 5285.118 kb on + strandat 5285.131 kb on + strandat 5285.262 kb on - strand, within AO353_24030at 5285.274 kb on - strand, within AO353_24030at 5285.460 kb on + strand, within AO353_24030at 5285.567 kb on + strand, within AO353_24030at 5285.567 kb on + strand, within AO353_24030at 5285.567 kb on + strand, within AO353_24030at 5285.568 kb on - strand, within AO353_24030at 5285.568 kb on - strand, within AO353_24030at 5285.568 kb on - strand, within AO353_24030at 5285.611 kb on + strand, within AO353_24030at 5285.612 kb on - strand, within AO353_24030at 5285.612 kb on - strand, within AO353_24030at 5285.708 kb on + strand, within AO353_24030at 5285.708 kb on + strand, within AO353_24030at 5285.795 kb on + strand, within AO353_24030at 5285.795 kb on + strand, within AO353_24030at 5285.795 kb on + strand, within AO353_24030at 5285.948 kb on - strand, within AO353_24030at 5285.950 kb on - strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.107 kb on + strand, within AO353_24030at 5286.108 kb on - strand, within AO353_24030at 5286.108 kb on - strand, within AO353_24030at 5286.108 kb on - strand, within AO353_24030at 5286.110 kb on + strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.111 kb on - strand, within AO353_24030at 5286.313 kb on + strand, within AO353_24030at 5286.313 kb on + strand, within AO353_24030at 5286.313 kb on + strand, within AO353_24030at 5286.615 kb on + strand, within AO353_24030at 5286.616 kb on - strand, within AO353_24030at 5286.621 kb on + strand, within AO353_24030at 5286.622 kb on - strand, within AO353_24030at 5286.745 kb on + strandat 5286.979 kb on + strand, within AO353_24035at 5286.979 kb on + strand, within AO353_24035at 5286.979 kb on + strand, within AO353_24035at 5286.980 kb on - strand, within AO353_24035at 5286.980 kb on - strand, within AO353_24035at 5286.980 kb on - strand, within AO353_24035at 5287.179 kb on + strand, within AO353_24035at 5287.179 kb on + strand, within AO353_24035at 5287.179 kb on + strand, within AO353_24035at 5287.179 kb on + strand, within AO353_24035at 5287.179 kb on + strand, within AO353_24035at 5287.180 kb on - strand, within AO353_24035at 5287.180 kb on - strand, within AO353_24035at 5287.180 kb on - strand, within AO353_24035at 5287.180 kb on - strand, within AO353_24035at 5287.214 kb on + strand, within AO353_24035at 5287.215 kb on - strand, within AO353_24035at 5287.215 kb on - strand, within AO353_24035at 5287.234 kb on + strand, within AO353_24035at 5287.234 kb on + strand, within AO353_24035at 5287.245 kb on + strand, within AO353_24035at 5287.245 kb on + strand, within AO353_24035at 5287.245 kb on + strand, within AO353_24035at 5287.245 kb on + strand, within AO353_24035at 5287.245 kb on + strand, within AO353_24035at 5287.245 kb on + strand, within AO353_24035at 5287.246 kb on - strand, within AO353_24035at 5287.246 kb on - strand, within AO353_24035at 5287.255 kb on + strand, within AO353_24035at 5287.256 kb on - strand, within AO353_24035at 5287.278 kb on + strand, within AO353_24035at 5287.278 kb on + strand, within AO353_24035at 5287.278 kb on + strand, within AO353_24035at 5287.278 kb on + strand, within AO353_24035at 5287.278 kb on + strand, within AO353_24035at 5287.278 kb on + strand, within AO353_24035at 5287.279 kb on - strand, within AO353_24035at 5287.279 kb on - strand, within AO353_24035at 5287.356 kb on + strand, within AO353_24035at 5287.356 kb on + strand, within AO353_24035at 5287.356 kb on + strand, within AO353_24035at 5287.368 kb on + strand, within AO353_24035at 5287.369 kb on - strand, within AO353_24035at 5287.369 kb on - strand, within AO353_24035at 5287.369 kb on - strand, within AO353_24035at 5287.398 kb on + strandat 5287.399 kb on - strand, within AO353_24035at 5287.399 kb on - strand, within AO353_24035at 5287.399 kb on - strand, within AO353_24035at 5287.404 kb on + strand, within AO353_24035at 5287.404 kb on + strand, within AO353_24035at 5287.405 kb on - strand, within AO353_24035at 5287.405 kb on - strand, within AO353_24035at 5287.405 kb on - strand, within AO353_24035at 5287.405 kb on - strand, within AO353_24035at 5287.419 kb on - strand, within AO353_24035at 5287.468 kb on - strand, within AO353_24035at 5287.487 kb on - strand, within AO353_24035at 5287.645 kb on + strand, within AO353_24035at 5287.646 kb on - strand, within AO353_24035at 5287.646 kb on - strand, within AO353_24035at 5287.681 kb on - strandat 5287.681 kb on - strandat 5287.699 kb on + strandat 5287.699 kb on + strandat 5287.699 kb on + strandat 5287.732 kb on + strandat 5287.759 kb on - strandat 5287.759 kb on - strandat 5287.759 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml
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5,284,196 + AO353_24025 0.52 -0.9
5,284,196 + AO353_24025 0.52 -0.7
5,284,197 - AO353_24025 0.52 +1.1
5,284,197 - AO353_24025 0.52 +0.3
5,284,299 + AO353_24025 0.57 -0.3
5,284,337 + AO353_24025 0.59 +0.7
5,284,337 + AO353_24025 0.59 +1.3
5,284,337 + AO353_24025 0.59 -0.3
5,284,338 - AO353_24025 0.60 -1.9
5,284,338 - AO353_24025 0.60 -0.3
5,284,338 - AO353_24025 0.60 +1.7
5,284,339 + AO353_24025 0.60 +1.0
5,284,339 + AO353_24025 0.60 -2.3
5,284,339 + AO353_24025 0.60 -1.3
5,284,339 + AO353_24025 0.60 +0.1
5,284,339 + AO353_24025 0.60 -0.3
5,284,340 - AO353_24025 0.60 -0.9
5,284,340 - AO353_24025 0.60 +1.3
5,284,340 - AO353_24025 0.60 +0.9
5,284,340 - AO353_24025 0.60 -1.9
5,284,343 + AO353_24025 0.60 +2.3
5,284,343 + AO353_24025 0.60 +1.0
5,284,343 + AO353_24025 0.60 -0.3
5,284,343 + AO353_24025 0.60 +0.3
5,284,344 - AO353_24025 0.60 +0.3
5,284,344 - AO353_24025 0.60 +0.2
5,284,344 - AO353_24025 0.60 -0.1
5,284,344 - AO353_24025 0.60 +0.5
5,284,344 - AO353_24025 0.60 -0.3
5,284,489 + AO353_24025 0.68 -0.7
5,284,660 + AO353_24025 0.77 +2.3
5,284,661 - AO353_24025 0.78 -0.3
5,284,661 - +1.3
5,284,740 + AO353_24025 0.82 -1.0
5,284,741 - AO353_24025 0.82 -0.1
5,285,070 + +1.0
5,285,116 + +0.7
5,285,116 + -0.5
5,285,116 + -0.9
5,285,116 + +0.9
5,285,116 + -0.2
5,285,116 + -1.1
5,285,116 + +0.7
5,285,116 + -0.6
5,285,116 + +0.4
5,285,116 + -0.7
5,285,116 + -1.0
5,285,116 + -0.9
5,285,117 - +0.7
5,285,117 - -0.9
5,285,117 - -0.3
5,285,117 - +0.7
5,285,117 - +0.3
5,285,117 - +1.6
5,285,117 - +0.2
5,285,117 - -0.3
5,285,117 - +1.3
5,285,118 + +0.3
5,285,118 + +1.5
5,285,118 + -0.3
5,285,118 + +0.6
5,285,131 + -0.5
5,285,262 - AO353_24030 0.12 -0.1
5,285,274 - AO353_24030 0.12 +2.9
5,285,460 + AO353_24030 0.23 +1.0
5,285,567 + AO353_24030 0.29 -0.3
5,285,567 + AO353_24030 0.29 +0.7
5,285,567 + AO353_24030 0.29 +1.0
5,285,568 - AO353_24030 0.29 -1.9
5,285,568 - AO353_24030 0.29 +0.7
5,285,568 - AO353_24030 0.29 +1.0
5,285,611 + AO353_24030 0.31 +0.5
5,285,612 - AO353_24030 0.31 +0.1
5,285,612 - AO353_24030 0.31 +0.7
5,285,708 + AO353_24030 0.37 +0.7
5,285,708 + AO353_24030 0.37 -0.3
5,285,795 + AO353_24030 0.42 -1.0
5,285,795 + AO353_24030 0.42 -0.3
5,285,795 + AO353_24030 0.42 -0.6
5,285,948 - AO353_24030 0.50 -0.3
5,285,950 - AO353_24030 0.51 -0.3
5,286,107 + AO353_24030 0.59 +1.7
5,286,107 + AO353_24030 0.59 +0.4
5,286,107 + AO353_24030 0.59 -0.0
5,286,107 + AO353_24030 0.59 -0.3
5,286,107 + AO353_24030 0.59 -0.8
5,286,107 + AO353_24030 0.59 -0.3
5,286,107 + AO353_24030 0.59 -1.3
5,286,107 + AO353_24030 0.59 -0.3
5,286,107 + AO353_24030 0.59 -0.7
5,286,107 + AO353_24030 0.59 -0.3
5,286,107 + AO353_24030 0.59 -2.9
5,286,108 - AO353_24030 0.59 +0.7
5,286,108 - AO353_24030 0.59 +0.3
5,286,108 - AO353_24030 0.59 -0.7
5,286,110 + AO353_24030 0.60 -0.6
5,286,111 - AO353_24030 0.60 -0.5
5,286,111 - AO353_24030 0.60 +0.1
5,286,111 - AO353_24030 0.60 +2.3
5,286,111 - AO353_24030 0.60 +1.7
5,286,111 - AO353_24030 0.60 -0.9
5,286,111 - AO353_24030 0.60 -0.3
5,286,111 - AO353_24030 0.60 +0.9
5,286,111 - AO353_24030 0.60 -0.1
5,286,111 - AO353_24030 0.60 +1.1
5,286,111 - AO353_24030 0.60 +0.9
5,286,111 - AO353_24030 0.60 +0.1
5,286,111 - AO353_24030 0.60 +0.3
5,286,313 + AO353_24030 0.71 -2.3
5,286,313 + AO353_24030 0.71 +0.3
5,286,313 + AO353_24030 0.71 +0.7
5,286,615 + AO353_24030 0.88 -1.9
5,286,616 - AO353_24030 0.88 -0.3
5,286,621 + AO353_24030 0.88 +0.1
5,286,622 - AO353_24030 0.88 +0.9
5,286,745 + +0.7
5,286,979 + AO353_24035 0.12 -0.6
5,286,979 + AO353_24035 0.12 +3.2
5,286,979 + AO353_24035 0.12 +0.4
5,286,980 - AO353_24035 0.12 -0.6
5,286,980 - AO353_24035 0.12 -0.3
5,286,980 - AO353_24035 0.12 +1.3
5,287,179 + AO353_24035 0.34 +1.8
5,287,179 + AO353_24035 0.34 -1.3
5,287,179 + AO353_24035 0.34 +0.3
5,287,179 + AO353_24035 0.34 -0.3
5,287,179 + AO353_24035 0.34 +0.3
5,287,180 - AO353_24035 0.34 +1.0
5,287,180 - AO353_24035 0.34 +0.1
5,287,180 - AO353_24035 0.34 +1.1
5,287,180 - AO353_24035 0.34 -0.3
5,287,214 + AO353_24035 0.38 -0.9
5,287,215 - AO353_24035 0.38 -1.1
5,287,215 - AO353_24035 0.38 -0.3
5,287,234 + AO353_24035 0.40 -0.3
5,287,234 + AO353_24035 0.40 +0.1
5,287,245 + AO353_24035 0.41 +1.7
5,287,245 + AO353_24035 0.41 +2.5
5,287,245 + AO353_24035 0.41 +0.1
5,287,245 + AO353_24035 0.41 +1.0
5,287,245 + AO353_24035 0.41 -0.7
5,287,245 + AO353_24035 0.41 +0.7
5,287,246 - AO353_24035 0.42 +0.7
5,287,246 - AO353_24035 0.42 +1.1
5,287,255 + AO353_24035 0.43 +0.1
5,287,256 - AO353_24035 0.43 +1.0
5,287,278 + AO353_24035 0.45 +0.4
5,287,278 + AO353_24035 0.45 +1.5
5,287,278 + AO353_24035 0.45 -0.3
5,287,278 + AO353_24035 0.45 -1.9
5,287,278 + AO353_24035 0.45 +0.3
5,287,278 + AO353_24035 0.45 +1.5
5,287,279 - AO353_24035 0.45 -1.3
5,287,279 - AO353_24035 0.45 -1.3
5,287,356 + AO353_24035 0.54 +0.4
5,287,356 + AO353_24035 0.54 +0.3
5,287,356 + AO353_24035 0.54 +1.0
5,287,368 + AO353_24035 0.55 +0.1
5,287,369 - AO353_24035 0.55 -1.3
5,287,369 - AO353_24035 0.55 -1.3
5,287,369 - AO353_24035 0.55 -1.7
5,287,398 + -0.3
5,287,399 - AO353_24035 0.59 -0.3
5,287,399 - AO353_24035 0.59 +0.3
5,287,399 - AO353_24035 0.59 -1.0
5,287,404 + AO353_24035 0.59 +1.5
5,287,404 + AO353_24035 0.59 +1.3
5,287,405 - AO353_24035 0.59 -0.3
5,287,405 - AO353_24035 0.59 +1.3
5,287,405 - AO353_24035 0.59 +0.7
5,287,405 - AO353_24035 0.59 +1.5
5,287,419 - AO353_24035 0.61 +0.3
5,287,468 - AO353_24035 0.66 -0.3
5,287,487 - AO353_24035 0.69 -0.9
5,287,645 + AO353_24035 0.86 +0.5
5,287,646 - AO353_24035 0.86 -0.7
5,287,646 - AO353_24035 0.86 -0.3
5,287,681 - +0.7
5,287,681 - +0.2
5,287,699 + +0.7
5,287,699 + +0.7
5,287,699 + +0.7
5,287,732 + -1.3
5,287,759 - +1.0
5,287,759 - +0.4
5,287,759 - -0.1

Or see this region's nucleotide sequence