Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24015 and AO353_24020 are separated by 228 nucleotides AO353_24020 and AO353_24025 are separated by 160 nucleotides AO353_24025 and AO353_24030 overlap by 7 nucleotides
AO353_24015: AO353_24015 - non ribosomal peptide synthetase BasB, at 5,280,196 to 5,282,364
_24015
AO353_24020: AO353_24020 - RNA polymerase subunit sigma, at 5,282,593 to 5,283,111
_24020
AO353_24025: AO353_24025 - ABC transporter ATP-binding protein, at 5,283,272 to 5,285,062
_24025
AO353_24030: AO353_24030 - ABC transporter ATP-binding protein, at 5,285,056 to 5,286,825
_24030
Position (kb)
5283
5284
5285
5286 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.329 kb on + strand at 5282.330 kb on - strand at 5282.381 kb on - strand at 5282.396 kb on - strand at 5282.403 kb on - strand at 5282.403 kb on - strand at 5282.403 kb on - strand at 5282.403 kb on - strand at 5282.447 kb on - strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.515 kb on - strand at 5282.515 kb on - strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.639 kb on - strand at 5282.639 kb on - strand at 5282.639 kb on - strand at 5282.725 kb on + strand, within AO353_24020 at 5282.725 kb on + strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.946 kb on + strand, within AO353_24020 at 5282.946 kb on + strand, within AO353_24020 at 5282.947 kb on - strand, within AO353_24020 at 5282.947 kb on - strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.144 kb on - strand at 5283.144 kb on - strand at 5283.185 kb on + strand at 5283.186 kb on - strand at 5283.191 kb on + strand at 5283.192 kb on - strand at 5283.192 kb on - strand at 5283.256 kb on + strand at 5283.256 kb on + strand at 5283.257 kb on - strand at 5283.407 kb on + strand at 5283.407 kb on + strand at 5283.407 kb on + strand at 5283.407 kb on + strand at 5283.408 kb on - strand at 5283.408 kb on - strand at 5283.596 kb on - strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.890 kb on - strand at 5283.890 kb on - strand, within AO353_24025 at 5284.196 kb on + strand, within AO353_24025 at 5284.196 kb on + strand, within AO353_24025 at 5284.197 kb on - strand, within AO353_24025 at 5284.197 kb on - strand, within AO353_24025 at 5284.299 kb on + strand, within AO353_24025 at 5284.337 kb on + strand, within AO353_24025 at 5284.337 kb on + strand, within AO353_24025 at 5284.337 kb on + strand, within AO353_24025 at 5284.338 kb on - strand, within AO353_24025 at 5284.338 kb on - strand, within AO353_24025 at 5284.338 kb on - strand, within AO353_24025 at 5284.339 kb on + strand, within AO353_24025 at 5284.339 kb on + strand, within AO353_24025 at 5284.339 kb on + strand, within AO353_24025 at 5284.339 kb on + strand, within AO353_24025 at 5284.339 kb on + strand, within AO353_24025 at 5284.340 kb on - strand, within AO353_24025 at 5284.340 kb on - strand, within AO353_24025 at 5284.340 kb on - strand, within AO353_24025 at 5284.340 kb on - strand, within AO353_24025 at 5284.343 kb on + strand, within AO353_24025 at 5284.343 kb on + strand, within AO353_24025 at 5284.343 kb on + strand, within AO353_24025 at 5284.343 kb on + strand, within AO353_24025 at 5284.344 kb on - strand, within AO353_24025 at 5284.344 kb on - strand, within AO353_24025 at 5284.344 kb on - strand, within AO353_24025 at 5284.344 kb on - strand, within AO353_24025 at 5284.344 kb on - strand, within AO353_24025 at 5284.489 kb on + strand, within AO353_24025 at 5284.660 kb on + strand, within AO353_24025 at 5284.661 kb on - strand, within AO353_24025 at 5284.661 kb on - strand at 5284.740 kb on + strand, within AO353_24025 at 5284.741 kb on - strand, within AO353_24025 at 5285.070 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.116 kb on + strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.117 kb on - strand at 5285.118 kb on + strand at 5285.118 kb on + strand at 5285.118 kb on + strand at 5285.118 kb on + strand at 5285.131 kb on + strand at 5285.262 kb on - strand, within AO353_24030 at 5285.274 kb on - strand, within AO353_24030 at 5285.460 kb on + strand, within AO353_24030 at 5285.567 kb on + strand, within AO353_24030 at 5285.567 kb on + strand, within AO353_24030 at 5285.567 kb on + strand, within AO353_24030 at 5285.568 kb on - strand, within AO353_24030 at 5285.568 kb on - strand, within AO353_24030 at 5285.568 kb on - strand, within AO353_24030 at 5285.611 kb on + strand, within AO353_24030 at 5285.612 kb on - strand, within AO353_24030 at 5285.612 kb on - strand, within AO353_24030 at 5285.708 kb on + strand, within AO353_24030 at 5285.708 kb on + strand, within AO353_24030 at 5285.795 kb on + strand, within AO353_24030 at 5285.795 kb on + strand, within AO353_24030 at 5285.795 kb on + strand, within AO353_24030 at 5285.948 kb on - strand, within AO353_24030 at 5285.950 kb on - strand, within AO353_24030
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,282,304 + +0.3 5,282,304 + +0.7 5,282,304 + +3.0 5,282,304 + -0.3 5,282,304 + -0.3 5,282,305 - +0.1 5,282,305 - +0.3 5,282,305 - +0.1 5,282,305 - +0.7 5,282,305 - +0.0 5,282,305 - -0.9 5,282,305 - +1.0 5,282,305 - -2.3 5,282,305 - -0.0 5,282,329 + +1.3 5,282,330 - +0.5 5,282,381 - +1.2 5,282,396 - -0.3 5,282,403 - +0.5 5,282,403 - +0.7 5,282,403 - +0.9 5,282,403 - +1.9 5,282,447 - -1.3 5,282,503 + -0.3 5,282,503 + -1.3 5,282,503 + +0.3 5,282,503 + -1.3 5,282,503 + +0.3 5,282,515 - +0.3 5,282,515 - +0.1 5,282,638 + -0.3 5,282,638 + -0.9 5,282,638 + +1.3 5,282,638 + +0.3 5,282,638 + -0.3 5,282,639 - +0.1 5,282,639 - -0.3 5,282,639 - +0.7 5,282,725 + AO353_24020 0.25 +0.6 5,282,725 + AO353_24020 0.25 +1.7 5,282,726 - AO353_24020 0.26 -0.3 5,282,726 - AO353_24020 0.26 +0.7 5,282,726 - AO353_24020 0.26 +0.3 5,282,726 - AO353_24020 0.26 -0.5 5,282,726 - AO353_24020 0.26 -1.3 5,282,726 - AO353_24020 0.26 +0.5 5,282,726 - AO353_24020 0.26 +1.4 5,282,810 + AO353_24020 0.42 +0.7 5,282,810 + AO353_24020 0.42 -0.3 5,282,810 + AO353_24020 0.42 -1.3 5,282,810 + AO353_24020 0.42 +0.3 5,282,810 + AO353_24020 0.42 +1.0 5,282,810 + AO353_24020 0.42 +0.7 5,282,811 - AO353_24020 0.42 +0.0 5,282,811 - AO353_24020 0.42 -0.3 5,282,811 - AO353_24020 0.42 +0.9 5,282,811 - AO353_24020 0.42 +1.3 5,282,811 - AO353_24020 0.42 +0.1 5,282,811 - AO353_24020 0.42 -2.0 5,282,946 + AO353_24020 0.68 -1.7 5,282,946 + AO353_24020 0.68 +1.8 5,282,947 - AO353_24020 0.68 -0.3 5,282,947 - AO353_24020 0.68 +0.1 5,283,055 + AO353_24020 0.89 -0.3 5,283,055 + AO353_24020 0.89 -0.3 5,283,055 + AO353_24020 0.89 -2.3 5,283,055 + AO353_24020 0.89 +0.1 5,283,055 + AO353_24020 0.89 +1.3 5,283,055 + AO353_24020 0.89 -0.1 5,283,055 + AO353_24020 0.89 -0.9 5,283,056 - AO353_24020 0.89 -0.7 5,283,056 - AO353_24020 0.89 +0.4 5,283,056 - AO353_24020 0.89 +0.7 5,283,056 - AO353_24020 0.89 -1.3 5,283,056 - AO353_24020 0.89 -0.9 5,283,144 - -0.3 5,283,144 - +0.7 5,283,185 + +1.7 5,283,186 - -1.3 5,283,191 + -0.5 5,283,192 - +0.7 5,283,192 - +0.4 5,283,256 + +1.7 5,283,256 + +1.1 5,283,257 - -1.3 5,283,407 + -0.7 5,283,407 + +0.2 5,283,407 + -0.3 5,283,407 + +0.4 5,283,408 - +0.7 5,283,408 - +1.0 5,283,596 - AO353_24025 0.18 -0.3 5,283,889 + AO353_24025 0.34 +1.3 5,283,889 + AO353_24025 0.34 -1.3 5,283,889 + AO353_24025 0.34 -0.5 5,283,889 + AO353_24025 0.34 -1.9 5,283,890 - +0.7 5,283,890 - AO353_24025 0.35 -1.6 5,284,196 + AO353_24025 0.52 -0.9 5,284,196 + AO353_24025 0.52 -0.7 5,284,197 - AO353_24025 0.52 +1.1 5,284,197 - AO353_24025 0.52 +0.3 5,284,299 + AO353_24025 0.57 -0.3 5,284,337 + AO353_24025 0.59 +0.7 5,284,337 + AO353_24025 0.59 +1.3 5,284,337 + AO353_24025 0.59 -0.3 5,284,338 - AO353_24025 0.60 -1.9 5,284,338 - AO353_24025 0.60 -0.3 5,284,338 - AO353_24025 0.60 +1.7 5,284,339 + AO353_24025 0.60 +1.0 5,284,339 + AO353_24025 0.60 -2.3 5,284,339 + AO353_24025 0.60 -1.3 5,284,339 + AO353_24025 0.60 +0.1 5,284,339 + AO353_24025 0.60 -0.3 5,284,340 - AO353_24025 0.60 -0.9 5,284,340 - AO353_24025 0.60 +1.3 5,284,340 - AO353_24025 0.60 +0.9 5,284,340 - AO353_24025 0.60 -1.9 5,284,343 + AO353_24025 0.60 +2.3 5,284,343 + AO353_24025 0.60 +1.0 5,284,343 + AO353_24025 0.60 -0.3 5,284,343 + AO353_24025 0.60 +0.3 5,284,344 - AO353_24025 0.60 +0.3 5,284,344 - AO353_24025 0.60 +0.2 5,284,344 - AO353_24025 0.60 -0.1 5,284,344 - AO353_24025 0.60 +0.5 5,284,344 - AO353_24025 0.60 -0.3 5,284,489 + AO353_24025 0.68 -0.7 5,284,660 + AO353_24025 0.77 +2.3 5,284,661 - AO353_24025 0.78 -0.3 5,284,661 - +1.3 5,284,740 + AO353_24025 0.82 -1.0 5,284,741 - AO353_24025 0.82 -0.1 5,285,070 + +1.0 5,285,116 + +0.7 5,285,116 + -0.5 5,285,116 + -0.9 5,285,116 + +0.9 5,285,116 + -0.2 5,285,116 + -1.1 5,285,116 + +0.7 5,285,116 + -0.6 5,285,116 + +0.4 5,285,116 + -0.7 5,285,116 + -1.0 5,285,116 + -0.9 5,285,117 - +0.7 5,285,117 - -0.9 5,285,117 - -0.3 5,285,117 - +0.7 5,285,117 - +0.3 5,285,117 - +1.6 5,285,117 - +0.2 5,285,117 - -0.3 5,285,117 - +1.3 5,285,118 + +0.3 5,285,118 + +1.5 5,285,118 + -0.3 5,285,118 + +0.6 5,285,131 + -0.5 5,285,262 - AO353_24030 0.12 -0.1 5,285,274 - AO353_24030 0.12 +2.9 5,285,460 + AO353_24030 0.23 +1.0 5,285,567 + AO353_24030 0.29 -0.3 5,285,567 + AO353_24030 0.29 +0.7 5,285,567 + AO353_24030 0.29 +1.0 5,285,568 - AO353_24030 0.29 -1.9 5,285,568 - AO353_24030 0.29 +0.7 5,285,568 - AO353_24030 0.29 +1.0 5,285,611 + AO353_24030 0.31 +0.5 5,285,612 - AO353_24030 0.31 +0.1 5,285,612 - AO353_24030 0.31 +0.7 5,285,708 + AO353_24030 0.37 +0.7 5,285,708 + AO353_24030 0.37 -0.3 5,285,795 + AO353_24030 0.42 -1.0 5,285,795 + AO353_24030 0.42 -0.3 5,285,795 + AO353_24030 0.42 -0.6 5,285,948 - AO353_24030 0.50 -0.3 5,285,950 - AO353_24030 0.51 -0.3
Or see this region's nucleotide sequence