Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23515 and AO353_23520 are separated by 10 nucleotides AO353_23520 and AO353_23525 are separated by 51 nucleotides
AO353_23515: AO353_23515 - muconate cycloisomerase, at 5,150,583 to 5,151,731
_23515
AO353_23520: AO353_23520 - muconolactone delta-isomerase, at 5,151,742 to 5,152,032
_23520
AO353_23525: AO353_23525 - Catechol 1,2-dioxygenase (EC 1.13.11.1) (from data) , at 5,152,084 to 5,153,013
_23525
Position (kb)
5151
5152
5153 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5150.763 kb on - strand, within AO353_23515 at 5150.837 kb on + strand, within AO353_23515 at 5150.838 kb on - strand, within AO353_23515 at 5150.838 kb on - strand, within AO353_23515 at 5150.874 kb on - strand, within AO353_23515 at 5150.885 kb on + strand, within AO353_23515 at 5150.886 kb on - strand, within AO353_23515 at 5150.886 kb on - strand, within AO353_23515 at 5150.894 kb on + strand, within AO353_23515 at 5150.895 kb on - strand, within AO353_23515 at 5150.977 kb on + strand, within AO353_23515 at 5150.978 kb on - strand, within AO353_23515 at 5151.755 kb on + strand at 5151.756 kb on - strand at 5151.756 kb on - strand at 5151.756 kb on - strand at 5151.898 kb on + strand, within AO353_23520 at 5151.898 kb on + strand, within AO353_23520 at 5151.898 kb on + strand, within AO353_23520 at 5151.898 kb on + strand, within AO353_23520 at 5151.899 kb on - strand, within AO353_23520 at 5151.899 kb on - strand, within AO353_23520 at 5151.899 kb on - strand, within AO353_23520 at 5151.967 kb on + strand, within AO353_23520 at 5151.967 kb on + strand, within AO353_23520 at 5151.967 kb on + strand, within AO353_23520 at 5151.968 kb on - strand, within AO353_23520 at 5151.968 kb on - strand, within AO353_23520 at 5151.968 kb on - strand, within AO353_23520 at 5151.968 kb on - strand, within AO353_23520 at 5151.968 kb on - strand, within AO353_23520 at 5152.011 kb on + strand at 5152.054 kb on - strand at 5152.058 kb on + strand at 5152.058 kb on + strand at 5152.059 kb on - strand at 5152.061 kb on + strand at 5152.061 kb on + strand at 5152.062 kb on - strand at 5152.062 kb on - strand at 5152.065 kb on + strand at 5152.065 kb on + strand at 5152.065 kb on + strand at 5152.065 kb on + strand at 5152.065 kb on + strand at 5152.066 kb on - strand at 5152.080 kb on - strand at 5152.186 kb on + strand, within AO353_23525 at 5152.187 kb on - strand, within AO353_23525 at 5152.264 kb on + strand, within AO353_23525 at 5152.265 kb on - strand, within AO353_23525 at 5152.330 kb on + strand, within AO353_23525 at 5152.331 kb on - strand, within AO353_23525 at 5152.331 kb on - strand, within AO353_23525 at 5152.331 kb on - strand, within AO353_23525 at 5152.372 kb on - strand, within AO353_23525 at 5152.411 kb on + strand, within AO353_23525 at 5152.412 kb on - strand, within AO353_23525 at 5152.570 kb on + strand, within AO353_23525 at 5152.570 kb on + strand, within AO353_23525 at 5152.570 kb on + strand, within AO353_23525 at 5152.570 kb on + strand, within AO353_23525 at 5152.570 kb on + strand, within AO353_23525 at 5152.571 kb on - strand, within AO353_23525 at 5152.571 kb on - strand, within AO353_23525 at 5152.576 kb on + strand, within AO353_23525 at 5152.577 kb on - strand, within AO353_23525 at 5152.577 kb on - strand, within AO353_23525 at 5152.816 kb on + strand, within AO353_23525 at 5152.816 kb on + strand, within AO353_23525 at 5152.816 kb on + strand, within AO353_23525 at 5152.817 kb on - strand, within AO353_23525 at 5152.817 kb on - strand, within AO353_23525 at 5152.817 kb on - strand, within AO353_23525 at 5152.817 kb on - strand, within AO353_23525
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,150,763 - AO353_23515 0.16 +0.2 5,150,837 + AO353_23515 0.22 +0.4 5,150,838 - AO353_23515 0.22 -0.9 5,150,838 - AO353_23515 0.22 +0.1 5,150,874 - AO353_23515 0.25 +1.0 5,150,885 + AO353_23515 0.26 -0.3 5,150,886 - AO353_23515 0.26 +2.0 5,150,886 - AO353_23515 0.26 +0.7 5,150,894 + AO353_23515 0.27 -0.0 5,150,895 - AO353_23515 0.27 +0.7 5,150,977 + AO353_23515 0.34 -0.7 5,150,978 - AO353_23515 0.34 -0.3 5,151,755 + +0.0 5,151,756 - -0.3 5,151,756 - -1.3 5,151,756 - +0.7 5,151,898 + AO353_23520 0.54 -0.9 5,151,898 + AO353_23520 0.54 -1.3 5,151,898 + AO353_23520 0.54 +1.7 5,151,898 + AO353_23520 0.54 -0.3 5,151,899 - AO353_23520 0.54 -0.0 5,151,899 - AO353_23520 0.54 +2.6 5,151,899 - AO353_23520 0.54 +1.3 5,151,967 + AO353_23520 0.77 +2.0 5,151,967 + AO353_23520 0.77 -0.3 5,151,967 + AO353_23520 0.77 +0.7 5,151,968 - AO353_23520 0.78 +1.3 5,151,968 - AO353_23520 0.78 +0.9 5,151,968 - AO353_23520 0.78 +0.3 5,151,968 - AO353_23520 0.78 +0.7 5,151,968 - AO353_23520 0.78 +0.9 5,152,011 + +0.5 5,152,054 - -0.9 5,152,058 + +0.0 5,152,058 + -0.3 5,152,059 - +0.4 5,152,061 + -0.3 5,152,061 + +0.5 5,152,062 - -2.6 5,152,062 - -0.3 5,152,065 + -0.9 5,152,065 + -0.3 5,152,065 + +1.0 5,152,065 + -0.0 5,152,065 + +1.0 5,152,066 - -2.6 5,152,080 - +0.3 5,152,186 + AO353_23525 0.11 +1.7 5,152,187 - AO353_23525 0.11 +0.4 5,152,264 + AO353_23525 0.19 -0.3 5,152,265 - AO353_23525 0.19 -2.3 5,152,330 + AO353_23525 0.26 +1.0 5,152,331 - AO353_23525 0.27 +1.0 5,152,331 - AO353_23525 0.27 +1.5 5,152,331 - AO353_23525 0.27 +0.5 5,152,372 - AO353_23525 0.31 +0.4 5,152,411 + AO353_23525 0.35 -0.3 5,152,412 - AO353_23525 0.35 +0.9 5,152,570 + AO353_23525 0.52 -0.3 5,152,570 + AO353_23525 0.52 +1.1 5,152,570 + AO353_23525 0.52 +0.3 5,152,570 + AO353_23525 0.52 +0.8 5,152,570 + AO353_23525 0.52 +1.6 5,152,571 - AO353_23525 0.52 -0.3 5,152,571 - AO353_23525 0.52 -0.3 5,152,576 + AO353_23525 0.53 +0.6 5,152,577 - AO353_23525 0.53 -0.0 5,152,577 - AO353_23525 0.53 -0.6 5,152,816 + AO353_23525 0.79 +1.0 5,152,816 + AO353_23525 0.79 +0.0 5,152,816 + AO353_23525 0.79 +0.7 5,152,817 - AO353_23525 0.79 +1.7 5,152,817 - AO353_23525 0.79 +2.0 5,152,817 - AO353_23525 0.79 +1.4 5,152,817 - AO353_23525 0.79 -1.0
Or see this region's nucleotide sequence