Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22210 and AO353_22215 are separated by 219 nucleotides AO353_22215 and AO353_22220 are separated by 467 nucleotides AO353_22220 and AO353_22225 are separated by 3 nucleotides
AO353_22210: AO353_22210 - copper oxidase, at 4,862,940 to 4,864,790
_22210
AO353_22215: AO353_22215 - hypothetical protein, at 4,865,010 to 4,865,216
_22215
AO353_22220: AO353_22220 - copper resistance protein CopC, at 4,865,684 to 4,866,067
_22220
AO353_22225: AO353_22225 - copper resistance protein CopD, at 4,866,071 to 4,867,009
_22225
Position (kb)
4865
4866
4867 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4864.701 kb on + strand at 4864.797 kb on + strand at 4864.798 kb on - strand at 4864.798 kb on - strand at 4864.798 kb on - strand at 4864.850 kb on + strand at 4864.850 kb on + strand at 4864.850 kb on + strand at 4864.881 kb on + strand at 4864.881 kb on + strand at 4864.881 kb on + strand at 4864.881 kb on + strand at 4864.881 kb on + strand at 4864.881 kb on + strand at 4864.882 kb on - strand at 4864.882 kb on - strand at 4864.882 kb on - strand at 4864.882 kb on - strand at 4864.885 kb on - strand at 4864.885 kb on - strand at 4864.885 kb on - strand at 4864.885 kb on - strand at 4864.894 kb on + strand at 4864.976 kb on + strand at 4864.977 kb on - strand at 4865.083 kb on - strand, within AO353_22215 at 4865.083 kb on - strand, within AO353_22215 at 4865.089 kb on + strand, within AO353_22215 at 4865.089 kb on + strand, within AO353_22215 at 4865.089 kb on + strand, within AO353_22215 at 4865.133 kb on + strand, within AO353_22215 at 4865.193 kb on - strand, within AO353_22215 at 4865.345 kb on - strand at 4865.380 kb on + strand at 4865.381 kb on - strand at 4865.381 kb on - strand at 4865.381 kb on - strand at 4865.381 kb on - strand at 4865.386 kb on + strand at 4865.386 kb on + strand at 4865.386 kb on + strand at 4865.386 kb on + strand at 4865.387 kb on - strand at 4865.387 kb on - strand at 4865.480 kb on + strand at 4865.481 kb on - strand at 4865.522 kb on + strand at 4865.522 kb on + strand at 4865.522 kb on + strand at 4865.523 kb on - strand at 4865.523 kb on - strand at 4865.524 kb on + strand at 4865.525 kb on - strand at 4865.565 kb on - strand at 4865.579 kb on + strand at 4865.588 kb on + strand at 4865.588 kb on + strand at 4865.589 kb on - strand at 4865.622 kb on - strand at 4865.918 kb on - strand, within AO353_22220 at 4865.989 kb on + strand, within AO353_22220 at 4865.993 kb on + strand, within AO353_22220 at 4865.993 kb on + strand, within AO353_22220 at 4865.993 kb on + strand, within AO353_22220 at 4865.993 kb on + strand, within AO353_22220 at 4865.993 kb on + strand, within AO353_22220 at 4865.994 kb on - strand, within AO353_22220 at 4865.994 kb on - strand, within AO353_22220 at 4865.994 kb on - strand, within AO353_22220 at 4865.994 kb on - strand, within AO353_22220 at 4866.088 kb on + strand at 4866.089 kb on - strand at 4866.153 kb on + strand at 4866.153 kb on + strand at 4866.155 kb on + strand at 4866.156 kb on - strand at 4866.156 kb on - strand at 4866.221 kb on - strand, within AO353_22225 at 4866.237 kb on + strand, within AO353_22225 at 4866.238 kb on - strand at 4866.299 kb on - strand at 4866.299 kb on - strand, within AO353_22225 at 4866.306 kb on + strand, within AO353_22225 at 4866.306 kb on + strand, within AO353_22225 at 4866.306 kb on + strand, within AO353_22225 at 4866.306 kb on + strand, within AO353_22225 at 4866.306 kb on + strand, within AO353_22225 at 4866.306 kb on + strand, within AO353_22225 at 4866.306 kb on + strand, within AO353_22225 at 4866.307 kb on - strand, within AO353_22225 at 4866.307 kb on - strand, within AO353_22225 at 4866.307 kb on - strand at 4866.316 kb on + strand, within AO353_22225 at 4866.372 kb on + strand, within AO353_22225 at 4866.373 kb on - strand, within AO353_22225 at 4866.412 kb on + strand, within AO353_22225 at 4866.412 kb on + strand, within AO353_22225 at 4866.413 kb on - strand, within AO353_22225 at 4866.499 kb on + strand, within AO353_22225 at 4866.500 kb on - strand, within AO353_22225 at 4866.541 kb on + strand, within AO353_22225 at 4866.542 kb on - strand, within AO353_22225 at 4866.597 kb on + strand, within AO353_22225 at 4866.598 kb on - strand, within AO353_22225 at 4866.598 kb on - strand, within AO353_22225 at 4866.691 kb on - strand, within AO353_22225 at 4866.693 kb on + strand, within AO353_22225 at 4866.714 kb on + strand, within AO353_22225 at 4866.722 kb on + strand, within AO353_22225 at 4866.722 kb on + strand, within AO353_22225 at 4866.722 kb on + strand, within AO353_22225 at 4866.735 kb on + strand, within AO353_22225 at 4866.770 kb on + strand, within AO353_22225 at 4866.770 kb on + strand, within AO353_22225 at 4866.770 kb on + strand, within AO353_22225 at 4866.771 kb on - strand, within AO353_22225 at 4866.819 kb on + strand, within AO353_22225 at 4866.858 kb on + strand, within AO353_22225 at 4866.858 kb on + strand, within AO353_22225 at 4866.858 kb on + strand, within AO353_22225 at 4866.858 kb on + strand, within AO353_22225 at 4866.859 kb on - strand, within AO353_22225 at 4866.884 kb on + strand, within AO353_22225 at 4866.884 kb on + strand, within AO353_22225 at 4866.913 kb on + strand, within AO353_22225 at 4866.913 kb on + strand, within AO353_22225 at 4866.914 kb on - strand, within AO353_22225 at 4866.970 kb on - strand at 4866.973 kb on + strand at 4866.973 kb on + strand at 4867.007 kb on + strand at 4867.063 kb on - strand at 4867.065 kb on + strand at 4867.065 kb on + strand at 4867.066 kb on - strand at 4867.066 kb on - strand at 4867.066 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 4,864,701 + +0.4 4,864,797 + -1.8 4,864,798 - +2.1 4,864,798 - -0.0 4,864,798 - -0.5 4,864,850 + -0.2 4,864,850 + -1.4 4,864,850 + +2.1 4,864,881 + -2.5 4,864,881 + +1.4 4,864,881 + +0.8 4,864,881 + +0.6 4,864,881 + +0.4 4,864,881 + -0.5 4,864,882 - -0.2 4,864,882 - -0.8 4,864,882 - -0.2 4,864,882 - -0.7 4,864,885 - -0.2 4,864,885 - -0.2 4,864,885 - -0.2 4,864,885 - +0.4 4,864,894 + -0.2 4,864,976 + +0.5 4,864,977 - +0.8 4,865,083 - AO353_22215 0.35 -0.2 4,865,083 - AO353_22215 0.35 +0.2 4,865,089 + AO353_22215 0.38 -0.5 4,865,089 + AO353_22215 0.38 +0.4 4,865,089 + AO353_22215 0.38 +2.4 4,865,133 + AO353_22215 0.59 +3.2 4,865,193 - AO353_22215 0.88 +1.2 4,865,345 - +0.5 4,865,380 + +2.8 4,865,381 - -0.7 4,865,381 - +2.1 4,865,381 - +0.8 4,865,381 - +0.8 4,865,386 + +0.8 4,865,386 + +0.0 4,865,386 + -0.5 4,865,386 + +0.2 4,865,387 - +1.4 4,865,387 - -0.2 4,865,480 + -1.0 4,865,481 - +0.8 4,865,522 + -1.0 4,865,522 + +0.0 4,865,522 + +0.3 4,865,523 - -1.2 4,865,523 - +0.5 4,865,524 + -0.2 4,865,525 - -0.1 4,865,565 - -1.8 4,865,579 + +0.0 4,865,588 + -0.4 4,865,588 + +0.8 4,865,589 - +0.4 4,865,622 - -0.2 4,865,918 - AO353_22220 0.61 -0.6 4,865,989 + AO353_22220 0.79 +1.1 4,865,993 + AO353_22220 0.80 -2.8 4,865,993 + AO353_22220 0.80 -1.2 4,865,993 + AO353_22220 0.80 -0.6 4,865,993 + AO353_22220 0.80 -0.2 4,865,993 + AO353_22220 0.80 -0.4 4,865,994 - AO353_22220 0.81 -0.6 4,865,994 - AO353_22220 0.81 -0.2 4,865,994 - AO353_22220 0.81 +0.8 4,865,994 - AO353_22220 0.81 +0.8 4,866,088 + +0.4 4,866,089 - +0.4 4,866,153 + -0.2 4,866,153 + -0.2 4,866,155 + -2.2 4,866,156 - -0.2 4,866,156 - -0.2 4,866,221 - AO353_22225 0.16 +0.8 4,866,237 + AO353_22225 0.18 +1.8 4,866,238 - +1.8 4,866,299 - -1.2 4,866,299 - AO353_22225 0.24 +0.4 4,866,306 + AO353_22225 0.25 -0.2 4,866,306 + AO353_22225 0.25 +0.8 4,866,306 + AO353_22225 0.25 +0.5 4,866,306 + AO353_22225 0.25 -1.3 4,866,306 + AO353_22225 0.25 -0.5 4,866,306 + AO353_22225 0.25 +0.8 4,866,306 + AO353_22225 0.25 -1.1 4,866,307 - AO353_22225 0.25 +0.9 4,866,307 - AO353_22225 0.25 -0.2 4,866,307 - +0.8 4,866,316 + AO353_22225 0.26 +2.1 4,866,372 + AO353_22225 0.32 +0.4 4,866,373 - AO353_22225 0.32 -0.2 4,866,412 + AO353_22225 0.36 +0.3 4,866,412 + AO353_22225 0.36 -0.2 4,866,413 - AO353_22225 0.36 +2.1 4,866,499 + AO353_22225 0.46 -0.2 4,866,500 - AO353_22225 0.46 +0.4 4,866,541 + AO353_22225 0.50 +0.4 4,866,542 - AO353_22225 0.50 +1.2 4,866,597 + AO353_22225 0.56 +1.4 4,866,598 - AO353_22225 0.56 +0.8 4,866,598 - AO353_22225 0.56 -1.2 4,866,691 - AO353_22225 0.66 +1.8 4,866,693 + AO353_22225 0.66 -0.2 4,866,714 + AO353_22225 0.68 -0.8 4,866,722 + AO353_22225 0.69 +2.1 4,866,722 + AO353_22225 0.69 -0.2 4,866,722 + AO353_22225 0.69 +1.0 4,866,735 + AO353_22225 0.71 +1.6 4,866,770 + AO353_22225 0.74 +0.9 4,866,770 + AO353_22225 0.74 +0.0 4,866,770 + AO353_22225 0.74 -0.5 4,866,771 - AO353_22225 0.75 -2.2 4,866,819 + AO353_22225 0.80 -0.5 4,866,858 + AO353_22225 0.84 -1.2 4,866,858 + AO353_22225 0.84 +1.4 4,866,858 + AO353_22225 0.84 -1.0 4,866,858 + AO353_22225 0.84 +0.9 4,866,859 - AO353_22225 0.84 +0.9 4,866,884 + AO353_22225 0.87 +1.4 4,866,884 + AO353_22225 0.87 +0.5 4,866,913 + AO353_22225 0.90 -0.2 4,866,913 + AO353_22225 0.90 +0.4 4,866,914 - AO353_22225 0.90 -2.2 4,866,970 - -0.2 4,866,973 + +1.4 4,866,973 + +0.2 4,867,007 + -1.8 4,867,063 - +1.2 4,867,065 + -2.2 4,867,065 + -0.8 4,867,066 - +0.1 4,867,066 - +0.8 4,867,066 - +1.6
Or see this region's nucleotide sequence