Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21740 and AO353_21745 are separated by 129 nucleotides AO353_21745 and AO353_21750 are separated by 24 nucleotides AO353_21750 and AO353_21755 are separated by 53 nucleotides
AO353_21740: AO353_21740 - D-glucosaminate dehydratase (EC 4.3.1.9) (from data) , at 4,764,849 to 4,766,066
_21740
AO353_21745: AO353_21745 - ketodeoxygluconokinase, at 4,766,196 to 4,767,131
_21745
AO353_21750: AO353_21750 - peptidylprolyl isomerase, at 4,767,156 to 4,767,431
_21750
AO353_21755: AO353_21755 - histidine kinase, at 4,767,485 to 4,770,022
_21755
Position (kb)
4766
4767
4768 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4765.221 kb on + strand, within AO353_21740 at 4765.222 kb on - strand, within AO353_21740 at 4765.222 kb on - strand, within AO353_21740 at 4765.222 kb on - strand, within AO353_21740 at 4765.480 kb on + strand, within AO353_21740 at 4765.560 kb on + strand, within AO353_21740 at 4765.561 kb on - strand, within AO353_21740 at 4765.635 kb on + strand, within AO353_21740 at 4765.635 kb on + strand, within AO353_21740 at 4765.635 kb on + strand, within AO353_21740 at 4765.635 kb on + strand, within AO353_21740 at 4765.635 kb on + strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.636 kb on - strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.659 kb on + strand, within AO353_21740 at 4765.660 kb on - strand, within AO353_21740 at 4765.660 kb on - strand, within AO353_21740 at 4765.660 kb on - strand, within AO353_21740 at 4765.660 kb on - strand, within AO353_21740 at 4765.660 kb on - strand, within AO353_21740 at 4765.695 kb on - strand, within AO353_21740 at 4765.798 kb on + strand, within AO353_21740 at 4765.798 kb on + strand, within AO353_21740 at 4765.798 kb on + strand, within AO353_21740 at 4765.798 kb on + strand, within AO353_21740 at 4765.799 kb on - strand, within AO353_21740 at 4765.799 kb on - strand, within AO353_21740 at 4765.799 kb on - strand, within AO353_21740 at 4765.799 kb on - strand, within AO353_21740 at 4765.803 kb on + strand, within AO353_21740 at 4765.804 kb on - strand, within AO353_21740 at 4765.970 kb on + strand at 4766.064 kb on + strand at 4766.065 kb on - strand at 4766.110 kb on + strand at 4766.129 kb on + strand at 4766.129 kb on + strand at 4766.130 kb on - strand at 4766.370 kb on + strand, within AO353_21745 at 4766.370 kb on + strand, within AO353_21745 at 4766.370 kb on + strand, within AO353_21745 at 4766.371 kb on - strand, within AO353_21745 at 4766.484 kb on + strand at 4766.484 kb on + strand, within AO353_21745 at 4766.484 kb on + strand, within AO353_21745 at 4766.485 kb on - strand, within AO353_21745 at 4766.485 kb on - strand, within AO353_21745 at 4766.527 kb on - strand, within AO353_21745 at 4766.604 kb on + strand, within AO353_21745 at 4766.616 kb on + strand, within AO353_21745 at 4766.616 kb on + strand, within AO353_21745 at 4766.616 kb on + strand, within AO353_21745 at 4766.617 kb on - strand at 4766.617 kb on - strand, within AO353_21745 at 4766.617 kb on - strand at 4766.617 kb on - strand, within AO353_21745 at 4766.617 kb on - strand, within AO353_21745 at 4766.617 kb on - strand, within AO353_21745 at 4766.660 kb on + strand, within AO353_21745 at 4766.728 kb on - strand, within AO353_21745 at 4766.728 kb on - strand, within AO353_21745 at 4766.790 kb on + strand, within AO353_21745 at 4766.790 kb on + strand, within AO353_21745 at 4766.791 kb on - strand, within AO353_21745 at 4766.887 kb on + strand, within AO353_21745 at 4767.021 kb on + strand, within AO353_21745 at 4767.022 kb on - strand, within AO353_21745 at 4767.166 kb on + strand at 4767.325 kb on + strand, within AO353_21750 at 4767.325 kb on + strand, within AO353_21750 at 4767.326 kb on - strand at 4767.326 kb on - strand, within AO353_21750 at 4767.326 kb on - strand, within AO353_21750 at 4767.366 kb on - strand, within AO353_21750 at 4767.366 kb on - strand, within AO353_21750 at 4767.441 kb on + strand at 4767.441 kb on + strand at 4767.441 kb on + strand at 4767.441 kb on + strand at 4767.442 kb on - strand at 4767.442 kb on - strand at 4767.442 kb on - strand at 4767.474 kb on + strand at 4767.475 kb on - strand at 4767.475 kb on - strand at 4767.620 kb on + strand at 4767.621 kb on - strand at 4767.621 kb on - strand at 4767.778 kb on - strand, within AO353_21755 at 4767.930 kb on + strand, within AO353_21755 at 4767.931 kb on - strand, within AO353_21755 at 4767.931 kb on - strand, within AO353_21755 at 4767.931 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.131 kb on + strand, within AO353_21755 at 4768.131 kb on + strand, within AO353_21755 at 4768.131 kb on + strand, within AO353_21755
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 4,765,221 + AO353_21740 0.31 +0.8 4,765,222 - AO353_21740 0.31 -0.5 4,765,222 - AO353_21740 0.31 -1.2 4,765,222 - AO353_21740 0.31 -0.2 4,765,480 + AO353_21740 0.52 +0.4 4,765,560 + AO353_21740 0.58 +0.4 4,765,561 - AO353_21740 0.58 +1.8 4,765,635 + AO353_21740 0.65 +0.8 4,765,635 + AO353_21740 0.65 +1.4 4,765,635 + AO353_21740 0.65 +2.2 4,765,635 + AO353_21740 0.65 -0.5 4,765,635 + AO353_21740 0.65 -1.8 4,765,636 - AO353_21740 0.65 -2.5 4,765,636 - AO353_21740 0.65 +0.6 4,765,636 - AO353_21740 0.65 +0.2 4,765,636 - AO353_21740 0.65 -0.6 4,765,636 - AO353_21740 0.65 +0.6 4,765,636 - AO353_21740 0.65 -0.2 4,765,636 - AO353_21740 0.65 -0.2 4,765,636 - AO353_21740 0.65 -0.7 4,765,659 + AO353_21740 0.67 -0.2 4,765,659 + AO353_21740 0.67 -1.2 4,765,659 + AO353_21740 0.67 +0.7 4,765,659 + AO353_21740 0.67 +0.4 4,765,659 + AO353_21740 0.67 +0.4 4,765,659 + AO353_21740 0.67 +0.6 4,765,659 + AO353_21740 0.67 +0.8 4,765,659 + AO353_21740 0.67 +2.7 4,765,660 - AO353_21740 0.67 -0.2 4,765,660 - AO353_21740 0.67 -0.6 4,765,660 - AO353_21740 0.67 -1.5 4,765,660 - AO353_21740 0.67 +0.0 4,765,660 - AO353_21740 0.67 +1.2 4,765,695 - AO353_21740 0.69 +0.1 4,765,798 + AO353_21740 0.78 +0.8 4,765,798 + AO353_21740 0.78 +0.6 4,765,798 + AO353_21740 0.78 -0.6 4,765,798 + AO353_21740 0.78 -0.0 4,765,799 - AO353_21740 0.78 +1.4 4,765,799 - AO353_21740 0.78 -1.0 4,765,799 - AO353_21740 0.78 +0.8 4,765,799 - AO353_21740 0.78 -0.2 4,765,803 + AO353_21740 0.78 +1.4 4,765,804 - AO353_21740 0.78 -0.2 4,765,970 + -1.8 4,766,064 + +0.4 4,766,065 - +1.2 4,766,110 + -0.2 4,766,129 + +1.0 4,766,129 + +0.0 4,766,130 - -0.2 4,766,370 + AO353_21745 0.19 -0.6 4,766,370 + AO353_21745 0.19 +0.8 4,766,370 + AO353_21745 0.19 +1.2 4,766,371 - AO353_21745 0.19 +1.1 4,766,484 + +0.4 4,766,484 + AO353_21745 0.31 +1.0 4,766,484 + AO353_21745 0.31 +1.8 4,766,485 - AO353_21745 0.31 +1.8 4,766,485 - AO353_21745 0.31 +1.3 4,766,527 - AO353_21745 0.35 +2.4 4,766,604 + AO353_21745 0.44 -0.2 4,766,616 + AO353_21745 0.45 +1.8 4,766,616 + AO353_21745 0.45 +0.4 4,766,616 + AO353_21745 0.45 +0.4 4,766,617 - -0.2 4,766,617 - AO353_21745 0.45 +1.1 4,766,617 - +1.4 4,766,617 - AO353_21745 0.45 +1.4 4,766,617 - AO353_21745 0.45 -2.0 4,766,617 - AO353_21745 0.45 +0.8 4,766,660 + AO353_21745 0.50 -0.6 4,766,728 - AO353_21745 0.57 +0.8 4,766,728 - AO353_21745 0.57 -1.2 4,766,790 + AO353_21745 0.63 +1.8 4,766,790 + AO353_21745 0.63 +1.2 4,766,791 - AO353_21745 0.64 -2.5 4,766,887 + AO353_21745 0.74 -0.2 4,767,021 + AO353_21745 0.88 +0.7 4,767,022 - AO353_21745 0.88 +0.3 4,767,166 + +0.3 4,767,325 + AO353_21750 0.61 -0.2 4,767,325 + AO353_21750 0.61 -0.2 4,767,326 - -0.2 4,767,326 - AO353_21750 0.62 +2.4 4,767,326 - AO353_21750 0.62 +2.6 4,767,366 - AO353_21750 0.76 -0.2 4,767,366 - AO353_21750 0.76 -0.7 4,767,441 + +1.2 4,767,441 + +0.2 4,767,441 + -0.2 4,767,441 + +0.8 4,767,442 - +0.6 4,767,442 - +1.8 4,767,442 - +1.2 4,767,474 + +0.8 4,767,475 - +1.6 4,767,475 - -1.0 4,767,620 + -0.8 4,767,621 - -0.2 4,767,621 - -1.8 4,767,778 - AO353_21755 0.12 +0.8 4,767,930 + AO353_21755 0.18 -0.2 4,767,931 - AO353_21755 0.18 -0.4 4,767,931 - AO353_21755 0.18 -0.6 4,767,931 - AO353_21755 0.18 +0.6 4,768,006 - AO353_21755 0.21 -0.3 4,768,006 - AO353_21755 0.21 -0.2 4,768,006 - AO353_21755 0.21 -0.2 4,768,006 - AO353_21755 0.21 -2.5 4,768,131 + AO353_21755 0.25 +0.5 4,768,131 + AO353_21755 0.25 +0.8 4,768,131 + AO353_21755 0.25 +0.2
Or see this region's nucleotide sequence