Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21590 and AO353_21595 are separated by 491 nucleotides AO353_21595 and AO353_21600 are separated by 231 nucleotides
AO353_21590: AO353_21590 - isochorismatase, at 4,728,055 to 4,728,579
_21590
AO353_21595: AO353_21595 - serine/threonine protein kinase, at 4,729,071 to 4,730,351
_21595
AO353_21600: AO353_21600 - hypothetical protein, at 4,730,583 to 4,732,247
_21600
Position (kb)
4729
4730
4731 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4728.193 kb on + strand, within AO353_21590 at 4728.193 kb on + strand, within AO353_21590 at 4728.194 kb on - strand, within AO353_21590 at 4728.222 kb on + strand, within AO353_21590 at 4728.223 kb on - strand, within AO353_21590 at 4728.237 kb on - strand, within AO353_21590 at 4728.237 kb on - strand, within AO353_21590 at 4728.379 kb on + strand, within AO353_21590 at 4728.379 kb on + strand, within AO353_21590 at 4728.379 kb on + strand, within AO353_21590 at 4728.380 kb on - strand, within AO353_21590 at 4728.380 kb on - strand, within AO353_21590 at 4728.380 kb on - strand, within AO353_21590 at 4728.380 kb on - strand, within AO353_21590 at 4728.380 kb on - strand, within AO353_21590 at 4728.380 kb on - strand, within AO353_21590 at 4728.443 kb on + strand, within AO353_21590 at 4728.443 kb on + strand, within AO353_21590 at 4728.444 kb on - strand, within AO353_21590 at 4728.444 kb on - strand, within AO353_21590 at 4728.444 kb on - strand, within AO353_21590 at 4728.499 kb on + strand, within AO353_21590 at 4728.499 kb on + strand, within AO353_21590 at 4728.500 kb on - strand, within AO353_21590 at 4728.500 kb on - strand, within AO353_21590 at 4728.533 kb on + strand at 4728.534 kb on - strand at 4728.579 kb on + strand at 4728.579 kb on + strand at 4728.579 kb on + strand at 4728.579 kb on + strand at 4728.579 kb on + strand at 4728.579 kb on + strand at 4728.579 kb on + strand at 4728.579 kb on + strand at 4728.580 kb on - strand at 4728.580 kb on - strand at 4728.580 kb on - strand at 4728.580 kb on - strand at 4728.580 kb on - strand at 4728.580 kb on - strand at 4728.580 kb on - strand at 4728.666 kb on + strand at 4728.666 kb on + strand at 4728.666 kb on + strand at 4728.666 kb on + strand at 4728.666 kb on + strand at 4728.667 kb on - strand at 4728.667 kb on - strand at 4728.670 kb on + strand at 4728.671 kb on - strand at 4728.671 kb on - strand at 4728.943 kb on + strand at 4728.943 kb on + strand at 4728.943 kb on + strand at 4728.944 kb on - strand at 4728.944 kb on - strand at 4728.944 kb on - strand at 4728.944 kb on - strand at 4729.105 kb on - strand at 4729.105 kb on - strand at 4729.281 kb on + strand, within AO353_21595 at 4729.282 kb on - strand, within AO353_21595 at 4729.282 kb on - strand, within AO353_21595 at 4729.282 kb on - strand, within AO353_21595 at 4729.395 kb on + strand, within AO353_21595 at 4729.395 kb on + strand, within AO353_21595 at 4729.395 kb on + strand, within AO353_21595 at 4729.395 kb on + strand, within AO353_21595 at 4729.395 kb on + strand, within AO353_21595 at 4729.395 kb on + strand, within AO353_21595 at 4729.396 kb on - strand, within AO353_21595 at 4729.396 kb on - strand, within AO353_21595 at 4729.396 kb on - strand, within AO353_21595 at 4729.428 kb on + strand, within AO353_21595 at 4729.428 kb on + strand, within AO353_21595 at 4729.429 kb on - strand, within AO353_21595 at 4729.429 kb on - strand, within AO353_21595 at 4729.429 kb on - strand, within AO353_21595 at 4729.429 kb on - strand, within AO353_21595 at 4729.429 kb on - strand, within AO353_21595 at 4729.429 kb on - strand, within AO353_21595 at 4729.944 kb on + strand, within AO353_21595 at 4729.944 kb on + strand, within AO353_21595 at 4729.945 kb on - strand, within AO353_21595 at 4730.034 kb on + strand, within AO353_21595 at 4730.034 kb on + strand, within AO353_21595 at 4730.034 kb on + strand at 4730.034 kb on + strand, within AO353_21595 at 4730.034 kb on + strand, within AO353_21595 at 4730.111 kb on + strand, within AO353_21595 at 4730.111 kb on + strand, within AO353_21595 at 4730.112 kb on - strand, within AO353_21595 at 4730.235 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.605 kb on + strand at 4730.606 kb on - strand at 4730.633 kb on + strand at 4730.709 kb on - strand at 4730.709 kb on - strand at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.873 kb on - strand, within AO353_21600 at 4730.899 kb on + strand, within AO353_21600 at 4730.900 kb on - strand, within AO353_21600 at 4730.923 kb on + strand, within AO353_21600 at 4730.978 kb on - strand, within AO353_21600 at 4730.980 kb on + strand, within AO353_21600 at 4731.020 kb on + strand, within AO353_21600 at 4731.021 kb on - strand, within AO353_21600 at 4731.037 kb on + strand, within AO353_21600 at 4731.247 kb on - strand, within AO353_21600 at 4731.314 kb on + strand, within AO353_21600
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 4,728,193 + AO353_21590 0.26 +0.8 4,728,193 + AO353_21590 0.26 +2.2 4,728,194 - AO353_21590 0.26 -1.0 4,728,222 + AO353_21590 0.32 +1.7 4,728,223 - AO353_21590 0.32 +0.5 4,728,237 - AO353_21590 0.35 +0.4 4,728,237 - AO353_21590 0.35 +1.8 4,728,379 + AO353_21590 0.62 -2.5 4,728,379 + AO353_21590 0.62 +1.4 4,728,379 + AO353_21590 0.62 +1.4 4,728,380 - AO353_21590 0.62 -1.2 4,728,380 - AO353_21590 0.62 -0.7 4,728,380 - AO353_21590 0.62 +0.4 4,728,380 - AO353_21590 0.62 -2.2 4,728,380 - AO353_21590 0.62 -0.2 4,728,380 - AO353_21590 0.62 +0.4 4,728,443 + AO353_21590 0.74 +1.4 4,728,443 + AO353_21590 0.74 -1.2 4,728,444 - AO353_21590 0.74 +2.2 4,728,444 - AO353_21590 0.74 -0.2 4,728,444 - AO353_21590 0.74 +0.8 4,728,499 + AO353_21590 0.85 +0.1 4,728,499 + AO353_21590 0.85 -0.2 4,728,500 - AO353_21590 0.85 +2.2 4,728,500 - AO353_21590 0.85 +1.4 4,728,533 + +0.8 4,728,534 - +0.3 4,728,579 + -0.7 4,728,579 + -0.7 4,728,579 + +0.2 4,728,579 + +0.4 4,728,579 + -0.4 4,728,579 + +0.8 4,728,579 + +1.4 4,728,579 + -0.6 4,728,580 - +0.4 4,728,580 - +3.6 4,728,580 - +0.6 4,728,580 - -1.0 4,728,580 - +0.8 4,728,580 - -0.2 4,728,580 - +2.4 4,728,666 + -0.9 4,728,666 + +0.7 4,728,666 + +1.0 4,728,666 + +0.4 4,728,666 + -1.5 4,728,667 - -0.2 4,728,667 - +1.2 4,728,670 + +1.2 4,728,671 - -0.1 4,728,671 - +0.6 4,728,943 + -0.9 4,728,943 + +0.8 4,728,943 + +2.6 4,728,944 - -1.7 4,728,944 - +3.5 4,728,944 - +2.2 4,728,944 - +1.6 4,729,105 - +1.3 4,729,105 - +0.7 4,729,281 + AO353_21595 0.16 +1.4 4,729,282 - AO353_21595 0.16 +2.8 4,729,282 - AO353_21595 0.16 -1.2 4,729,282 - AO353_21595 0.16 +0.4 4,729,395 + AO353_21595 0.25 +2.4 4,729,395 + AO353_21595 0.25 +1.4 4,729,395 + AO353_21595 0.25 +0.4 4,729,395 + AO353_21595 0.25 +1.2 4,729,395 + AO353_21595 0.25 +0.8 4,729,395 + AO353_21595 0.25 +0.4 4,729,396 - AO353_21595 0.25 +2.3 4,729,396 - AO353_21595 0.25 +0.2 4,729,396 - AO353_21595 0.25 +0.2 4,729,428 + AO353_21595 0.28 +0.3 4,729,428 + AO353_21595 0.28 +2.0 4,729,429 - AO353_21595 0.28 +0.4 4,729,429 - AO353_21595 0.28 +1.2 4,729,429 - AO353_21595 0.28 +2.8 4,729,429 - AO353_21595 0.28 +1.6 4,729,429 - AO353_21595 0.28 -0.2 4,729,429 - AO353_21595 0.28 +2.2 4,729,944 + AO353_21595 0.68 +3.0 4,729,944 + AO353_21595 0.68 +0.4 4,729,945 - AO353_21595 0.68 +2.8 4,730,034 + AO353_21595 0.75 +1.3 4,730,034 + AO353_21595 0.75 +0.4 4,730,034 + -0.2 4,730,034 + AO353_21595 0.75 +1.4 4,730,034 + AO353_21595 0.75 +1.7 4,730,111 + AO353_21595 0.81 +0.5 4,730,111 + AO353_21595 0.81 -0.2 4,730,112 - AO353_21595 0.81 -0.4 4,730,235 + +2.0 4,730,379 + +3.6 4,730,379 + -0.4 4,730,379 + +1.6 4,730,379 + +0.4 4,730,379 + -0.7 4,730,379 + +1.8 4,730,379 + +2.8 4,730,379 + +0.6 4,730,379 + -2.2 4,730,379 + +0.8 4,730,380 - +1.4 4,730,380 - -0.2 4,730,380 - -1.2 4,730,380 - +0.6 4,730,380 - -0.2 4,730,380 - -0.2 4,730,380 - +2.8 4,730,380 - +1.8 4,730,380 - -0.6 4,730,381 + -0.2 4,730,381 + +1.4 4,730,381 + +1.8 4,730,381 + +1.1 4,730,381 + -0.2 4,730,381 + +0.4 4,730,381 + -3.2 4,730,381 + +0.3 4,730,381 + +0.1 4,730,381 + +0.8 4,730,381 + +1.6 4,730,381 + +1.4 4,730,381 + -0.2 4,730,381 + -1.2 4,730,381 + -0.2 4,730,381 + +1.6 4,730,381 + +0.4 4,730,382 - +0.8 4,730,382 - -0.4 4,730,382 - +2.3 4,730,382 - -0.2 4,730,382 - -0.2 4,730,382 - +0.3 4,730,382 - -0.7 4,730,382 - +0.3 4,730,382 - +1.4 4,730,382 - +1.8 4,730,605 + +1.0 4,730,606 - +1.8 4,730,633 + +0.6 4,730,709 - +0.6 4,730,709 - +0.6 4,730,872 + AO353_21600 0.17 +0.4 4,730,872 + AO353_21600 0.17 +0.9 4,730,872 + AO353_21600 0.17 +0.1 4,730,872 + AO353_21600 0.17 -0.2 4,730,872 + AO353_21600 0.17 +0.8 4,730,873 - AO353_21600 0.17 +0.4 4,730,899 + AO353_21600 0.19 -0.2 4,730,900 - AO353_21600 0.19 +1.2 4,730,923 + AO353_21600 0.20 -1.2 4,730,978 - AO353_21600 0.24 -0.9 4,730,980 + AO353_21600 0.24 -2.2 4,731,020 + AO353_21600 0.26 +0.4 4,731,021 - AO353_21600 0.26 +1.4 4,731,037 + AO353_21600 0.27 +1.6 4,731,247 - AO353_21600 0.40 +2.2 4,731,314 + AO353_21600 0.44 -0.2
Or see this region's nucleotide sequence