Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21565 and AO353_21570 are separated by 18 nucleotides AO353_21570 and AO353_21575 overlap by 4 nucleotides AO353_21575 and AO353_21580 overlap by 4 nucleotides
AO353_21565: AO353_21565 - type VI secretion protein, at 4,719,842 to 4,721,173
_21565
AO353_21570: AO353_21570 - type VI secretion system protein ImpK, at 4,721,192 to 4,721,959
_21570
AO353_21575: AO353_21575 - type VI secretion system protein ImpL, at 4,721,956 to 4,725,774
_21575
AO353_21580: AO353_21580 - type VI secretion protein, at 4,725,771 to 4,726,871
_21580
Position (kb)
4721
4722
4723
4724
4725
4726 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4721.015 kb on + strand, within AO353_21565 at 4721.015 kb on + strand, within AO353_21565 at 4721.033 kb on - strand, within AO353_21565 at 4721.432 kb on + strand, within AO353_21570 at 4721.432 kb on + strand, within AO353_21570 at 4721.433 kb on - strand, within AO353_21570 at 4721.433 kb on - strand, within AO353_21570 at 4721.511 kb on + strand, within AO353_21570 at 4721.525 kb on + strand, within AO353_21570 at 4721.525 kb on + strand, within AO353_21570 at 4721.525 kb on + strand at 4721.525 kb on + strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.634 kb on + strand, within AO353_21570 at 4722.070 kb on + strand at 4722.459 kb on - strand, within AO353_21575 at 4722.487 kb on + strand, within AO353_21575 at 4722.487 kb on + strand, within AO353_21575 at 4722.487 kb on + strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.589 kb on + strand, within AO353_21575 at 4722.589 kb on + strand, within AO353_21575 at 4722.589 kb on + strand, within AO353_21575 at 4722.590 kb on - strand, within AO353_21575 at 4722.590 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand at 4722.849 kb on + strand, within AO353_21575 at 4722.872 kb on - strand, within AO353_21575 at 4723.377 kb on + strand, within AO353_21575 at 4723.378 kb on - strand, within AO353_21575 at 4723.414 kb on + strand, within AO353_21575 at 4723.414 kb on + strand, within AO353_21575 at 4723.414 kb on + strand, within AO353_21575 at 4723.414 kb on + strand, within AO353_21575 at 4723.414 kb on + strand, within AO353_21575 at 4723.415 kb on - strand, within AO353_21575 at 4723.415 kb on - strand, within AO353_21575 at 4723.585 kb on + strand, within AO353_21575 at 4723.585 kb on + strand, within AO353_21575 at 4723.585 kb on + strand, within AO353_21575 at 4723.586 kb on - strand, within AO353_21575 at 4723.586 kb on - strand, within AO353_21575 at 4723.586 kb on - strand, within AO353_21575 at 4723.586 kb on - strand, within AO353_21575 at 4723.702 kb on + strand, within AO353_21575 at 4723.702 kb on + strand, within AO353_21575 at 4723.703 kb on - strand, within AO353_21575 at 4724.215 kb on + strand, within AO353_21575 at 4724.216 kb on - strand, within AO353_21575 at 4724.216 kb on - strand, within AO353_21575 at 4724.227 kb on + strand, within AO353_21575 at 4724.227 kb on + strand, within AO353_21575 at 4724.228 kb on - strand, within AO353_21575 at 4724.237 kb on - strand, within AO353_21575 at 4724.237 kb on - strand, within AO353_21575 at 4724.259 kb on + strand, within AO353_21575 at 4724.260 kb on - strand, within AO353_21575 at 4724.507 kb on + strand, within AO353_21575 at 4724.508 kb on - strand, within AO353_21575 at 4724.508 kb on - strand, within AO353_21575 at 4724.542 kb on - strand, within AO353_21575 at 4724.584 kb on + strand, within AO353_21575 at 4724.585 kb on - strand, within AO353_21575 at 4724.652 kb on + strand, within AO353_21575 at 4724.653 kb on - strand, within AO353_21575 at 4724.664 kb on + strand, within AO353_21575 at 4724.664 kb on + strand, within AO353_21575 at 4724.664 kb on + strand, within AO353_21575 at 4724.664 kb on + strand, within AO353_21575 at 4724.664 kb on + strand, within AO353_21575 at 4724.664 kb on + strand, within AO353_21575 at 4724.665 kb on - strand, within AO353_21575 at 4724.665 kb on - strand, within AO353_21575 at 4724.665 kb on - strand, within AO353_21575 at 4724.767 kb on + strand, within AO353_21575 at 4724.768 kb on - strand, within AO353_21575 at 4724.768 kb on - strand, within AO353_21575 at 4724.768 kb on - strand, within AO353_21575 at 4724.998 kb on + strand, within AO353_21575 at 4724.998 kb on + strand, within AO353_21575 at 4724.998 kb on + strand, within AO353_21575 at 4725.010 kb on + strand, within AO353_21575 at 4725.225 kb on + strand, within AO353_21575 at 4725.565 kb on + strand at 4725.565 kb on + strand at 4725.566 kb on - strand at 4725.566 kb on - strand at 4725.787 kb on + strand at 4725.787 kb on + strand at 4725.788 kb on - strand at 4725.873 kb on + strand at 4726.479 kb on + strand, within AO353_21580 at 4726.479 kb on + strand, within AO353_21580 at 4726.479 kb on + strand, within AO353_21580 at 4726.479 kb on + strand, within AO353_21580 at 4726.480 kb on - strand, within AO353_21580 at 4726.503 kb on + strand, within AO353_21580 at 4726.504 kb on - strand, within AO353_21580 at 4726.755 kb on + strand, within AO353_21580 at 4726.755 kb on + strand, within AO353_21580 at 4726.755 kb on + strand, within AO353_21580 at 4726.755 kb on + strand, within AO353_21580 at 4726.756 kb on - strand, within AO353_21580 at 4726.756 kb on - strand, within AO353_21580 at 4726.756 kb on - strand, within AO353_21580 at 4726.756 kb on - strand, within AO353_21580 at 4726.756 kb on - strand, within AO353_21580 at 4726.756 kb on - strand, within AO353_21580
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 4,721,015 + AO353_21565 0.88 +0.8 4,721,015 + AO353_21565 0.88 +0.0 4,721,033 - AO353_21565 0.89 -1.7 4,721,432 + AO353_21570 0.31 +0.8 4,721,432 + AO353_21570 0.31 +1.4 4,721,433 - AO353_21570 0.31 +0.1 4,721,433 - AO353_21570 0.31 -1.7 4,721,511 + AO353_21570 0.42 -2.2 4,721,525 + AO353_21570 0.43 -1.2 4,721,525 + AO353_21570 0.43 +0.4 4,721,525 + +0.8 4,721,525 + AO353_21570 0.43 -2.7 4,721,526 - AO353_21570 0.43 -1.5 4,721,526 - AO353_21570 0.43 -2.5 4,721,526 - AO353_21570 0.43 +3.2 4,721,526 - AO353_21570 0.43 -0.4 4,721,618 + AO353_21570 0.55 +0.2 4,721,618 + AO353_21570 0.55 +1.4 4,721,618 + AO353_21570 0.55 -0.2 4,721,618 + AO353_21570 0.55 -0.2 4,721,634 + AO353_21570 0.58 +1.8 4,722,070 + -1.2 4,722,459 - AO353_21575 0.13 -0.2 4,722,487 + AO353_21575 0.14 -0.2 4,722,487 + AO353_21575 0.14 +0.6 4,722,487 + AO353_21575 0.14 -0.2 4,722,488 - AO353_21575 0.14 +0.1 4,722,488 - AO353_21575 0.14 -0.2 4,722,488 - AO353_21575 0.14 +1.3 4,722,488 - AO353_21575 0.14 -0.5 4,722,488 - AO353_21575 0.14 -0.7 4,722,589 + AO353_21575 0.17 -0.2 4,722,589 + AO353_21575 0.17 +0.6 4,722,589 + AO353_21575 0.17 +0.6 4,722,590 - AO353_21575 0.17 +2.5 4,722,590 - AO353_21575 0.17 -0.5 4,722,821 - AO353_21575 0.23 -1.2 4,722,821 - AO353_21575 0.23 -0.6 4,722,821 - AO353_21575 0.23 -0.4 4,722,821 - AO353_21575 0.23 -1.7 4,722,821 - -1.2 4,722,849 + AO353_21575 0.23 +0.3 4,722,872 - AO353_21575 0.24 -0.4 4,723,377 + AO353_21575 0.37 +0.3 4,723,378 - AO353_21575 0.37 +1.2 4,723,414 + AO353_21575 0.38 -1.2 4,723,414 + AO353_21575 0.38 +2.2 4,723,414 + AO353_21575 0.38 -0.2 4,723,414 + AO353_21575 0.38 -0.2 4,723,414 + AO353_21575 0.38 +0.8 4,723,415 - AO353_21575 0.38 +1.1 4,723,415 - AO353_21575 0.38 -1.2 4,723,585 + AO353_21575 0.43 -0.2 4,723,585 + AO353_21575 0.43 -0.2 4,723,585 + AO353_21575 0.43 +0.8 4,723,586 - AO353_21575 0.43 -0.2 4,723,586 - AO353_21575 0.43 -0.4 4,723,586 - AO353_21575 0.43 -1.2 4,723,586 - AO353_21575 0.43 -0.7 4,723,702 + AO353_21575 0.46 -0.2 4,723,702 + AO353_21575 0.46 +1.5 4,723,703 - AO353_21575 0.46 +0.8 4,724,215 + AO353_21575 0.59 -0.7 4,724,216 - AO353_21575 0.59 +1.1 4,724,216 - AO353_21575 0.59 +0.3 4,724,227 + AO353_21575 0.59 -0.2 4,724,227 + AO353_21575 0.59 +0.8 4,724,228 - AO353_21575 0.59 -0.9 4,724,237 - AO353_21575 0.60 -1.2 4,724,237 - AO353_21575 0.60 -0.2 4,724,259 + AO353_21575 0.60 +1.4 4,724,260 - AO353_21575 0.60 +1.4 4,724,507 + AO353_21575 0.67 -1.2 4,724,508 - AO353_21575 0.67 -0.9 4,724,508 - AO353_21575 0.67 -0.5 4,724,542 - AO353_21575 0.68 -0.2 4,724,584 + AO353_21575 0.69 -1.2 4,724,585 - AO353_21575 0.69 +1.4 4,724,652 + AO353_21575 0.71 -2.2 4,724,653 - AO353_21575 0.71 -0.5 4,724,664 + AO353_21575 0.71 +0.8 4,724,664 + AO353_21575 0.71 +1.1 4,724,664 + AO353_21575 0.71 -0.2 4,724,664 + AO353_21575 0.71 +0.2 4,724,664 + AO353_21575 0.71 +0.4 4,724,664 + AO353_21575 0.71 -0.2 4,724,665 - AO353_21575 0.71 +0.6 4,724,665 - AO353_21575 0.71 -0.7 4,724,665 - AO353_21575 0.71 -0.4 4,724,767 + AO353_21575 0.74 +1.8 4,724,768 - AO353_21575 0.74 -0.2 4,724,768 - AO353_21575 0.74 +0.8 4,724,768 - AO353_21575 0.74 -0.2 4,724,998 + AO353_21575 0.80 +0.2 4,724,998 + AO353_21575 0.80 -0.7 4,724,998 + AO353_21575 0.80 -0.2 4,725,010 + AO353_21575 0.80 +1.6 4,725,225 + AO353_21575 0.86 +1.2 4,725,565 + -1.2 4,725,565 + +1.8 4,725,566 - +0.8 4,725,566 - -1.7 4,725,787 + -1.2 4,725,787 + -0.6 4,725,788 - +0.8 4,725,873 + +0.7 4,726,479 + AO353_21580 0.64 -0.9 4,726,479 + AO353_21580 0.64 +1.7 4,726,479 + AO353_21580 0.64 +0.4 4,726,479 + AO353_21580 0.64 +0.8 4,726,480 - AO353_21580 0.64 +0.6 4,726,503 + AO353_21580 0.66 -0.6 4,726,504 - AO353_21580 0.67 +1.4 4,726,755 + AO353_21580 0.89 +0.4 4,726,755 + AO353_21580 0.89 +0.8 4,726,755 + AO353_21580 0.89 +0.4 4,726,755 + AO353_21580 0.89 +2.3 4,726,756 - AO353_21580 0.89 -2.2 4,726,756 - AO353_21580 0.89 -1.7 4,726,756 - AO353_21580 0.89 +0.2 4,726,756 - AO353_21580 0.89 -1.2 4,726,756 - AO353_21580 0.89 +0.8 4,726,756 - AO353_21580 0.89 -0.2
Or see this region's nucleotide sequence