Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21525 and AO353_21530 are separated by 2 nucleotides AO353_21530 and AO353_21535 overlap by 37 nucleotides
AO353_21525: AO353_21525 - ClpV1 family T6SS ATPase, at 4,710,666 to 4,713,215
_21525
AO353_21530: AO353_21530 - type VI secretion protein, at 4,713,218 to 4,714,243
_21530
AO353_21535: AO353_21535 - type VI secretion system protein ImpG, at 4,714,207 to 4,715,997
_21535
Position (kb)
4713
4714
4715 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4712.445 kb on + strand, within AO353_21525 at 4712.482 kb on - strand, within AO353_21525 at 4712.685 kb on + strand, within AO353_21525 at 4712.686 kb on - strand, within AO353_21525 at 4712.686 kb on - strand, within AO353_21525 at 4712.790 kb on + strand, within AO353_21525 at 4712.874 kb on + strand, within AO353_21525 at 4713.121 kb on + strand at 4713.121 kb on + strand at 4713.121 kb on + strand at 4713.121 kb on + strand at 4713.121 kb on + strand at 4713.122 kb on - strand at 4713.122 kb on - strand at 4713.122 kb on - strand at 4713.122 kb on - strand at 4713.390 kb on + strand, within AO353_21530 at 4713.391 kb on - strand, within AO353_21530 at 4713.391 kb on - strand, within AO353_21530 at 4713.391 kb on - strand, within AO353_21530 at 4713.609 kb on + strand, within AO353_21530 at 4713.610 kb on - strand, within AO353_21530 at 4713.610 kb on - strand, within AO353_21530 at 4713.850 kb on - strand, within AO353_21530 at 4713.903 kb on + strand, within AO353_21530 at 4713.942 kb on + strand, within AO353_21530 at 4713.943 kb on - strand, within AO353_21530 at 4714.304 kb on + strand at 4714.304 kb on + strand at 4714.304 kb on + strand at 4714.304 kb on + strand at 4714.304 kb on + strand at 4714.304 kb on + strand at 4714.304 kb on + strand at 4714.304 kb on + strand at 4714.305 kb on - strand at 4714.509 kb on + strand, within AO353_21535 at 4714.509 kb on + strand, within AO353_21535 at 4714.650 kb on + strand at 4714.872 kb on - strand, within AO353_21535 at 4714.904 kb on + strand, within AO353_21535 at 4714.904 kb on + strand, within AO353_21535 at 4714.905 kb on - strand, within AO353_21535 at 4714.905 kb on - strand, within AO353_21535 at 4714.905 kb on - strand, within AO353_21535 at 4714.907 kb on + strand, within AO353_21535 at 4714.907 kb on + strand, within AO353_21535 at 4714.907 kb on + strand, within AO353_21535 at 4714.907 kb on + strand, within AO353_21535 at 4714.907 kb on + strand, within AO353_21535 at 4714.908 kb on - strand, within AO353_21535 at 4714.924 kb on + strand, within AO353_21535 at 4714.925 kb on - strand, within AO353_21535 at 4715.104 kb on + strand, within AO353_21535 at 4715.104 kb on + strand, within AO353_21535 at 4715.104 kb on + strand, within AO353_21535 at 4715.104 kb on + strand, within AO353_21535 at 4715.105 kb on - strand, within AO353_21535 at 4715.105 kb on - strand, within AO353_21535 at 4715.105 kb on - strand, within AO353_21535 at 4715.144 kb on + strand, within AO353_21535 at 4715.144 kb on + strand, within AO353_21535 at 4715.144 kb on + strand, within AO353_21535 at 4715.144 kb on + strand, within AO353_21535 at 4715.144 kb on + strand, within AO353_21535 at 4715.144 kb on + strand, within AO353_21535 at 4715.145 kb on - strand, within AO353_21535 at 4715.145 kb on - strand, within AO353_21535 at 4715.145 kb on - strand, within AO353_21535 at 4715.145 kb on - strand, within AO353_21535 at 4715.145 kb on - strand, within AO353_21535 at 4715.150 kb on + strand, within AO353_21535 at 4715.150 kb on + strand, within AO353_21535 at 4715.151 kb on - strand, within AO353_21535 at 4715.151 kb on - strand, within AO353_21535 at 4715.225 kb on + strand, within AO353_21535 at 4715.225 kb on + strand, within AO353_21535 at 4715.226 kb on - strand, within AO353_21535
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 4,712,445 + AO353_21525 0.70 -1.7 4,712,482 - AO353_21525 0.71 +2.4 4,712,685 + AO353_21525 0.79 +2.8 4,712,686 - AO353_21525 0.79 +0.3 4,712,686 - AO353_21525 0.79 +0.4 4,712,790 + AO353_21525 0.83 -1.2 4,712,874 + AO353_21525 0.87 +2.0 4,713,121 + -1.7 4,713,121 + -1.4 4,713,121 + +1.4 4,713,121 + -0.2 4,713,121 + +0.6 4,713,122 - -1.2 4,713,122 - -1.7 4,713,122 - +0.2 4,713,122 - +0.8 4,713,390 + AO353_21530 0.17 +1.8 4,713,391 - AO353_21530 0.17 +1.4 4,713,391 - AO353_21530 0.17 +0.8 4,713,391 - AO353_21530 0.17 +0.7 4,713,609 + AO353_21530 0.38 -0.2 4,713,610 - AO353_21530 0.38 +0.6 4,713,610 - AO353_21530 0.38 +0.3 4,713,850 - AO353_21530 0.62 +0.4 4,713,903 + AO353_21530 0.67 +1.8 4,713,942 + AO353_21530 0.71 +0.3 4,713,943 - AO353_21530 0.71 +0.8 4,714,304 + +0.8 4,714,304 + -0.2 4,714,304 + +0.8 4,714,304 + +1.8 4,714,304 + -0.2 4,714,304 + +2.4 4,714,304 + -2.7 4,714,304 + -0.7 4,714,305 - -0.4 4,714,509 + AO353_21535 0.17 -1.0 4,714,509 + AO353_21535 0.17 -1.2 4,714,650 + -0.2 4,714,872 - AO353_21535 0.37 -1.7 4,714,904 + AO353_21535 0.39 -1.5 4,714,904 + AO353_21535 0.39 +1.8 4,714,905 - AO353_21535 0.39 +1.2 4,714,905 - AO353_21535 0.39 -0.2 4,714,905 - AO353_21535 0.39 +1.4 4,714,907 + AO353_21535 0.39 +2.4 4,714,907 + AO353_21535 0.39 +1.4 4,714,907 + AO353_21535 0.39 +0.8 4,714,907 + AO353_21535 0.39 +1.8 4,714,907 + AO353_21535 0.39 +0.8 4,714,908 - AO353_21535 0.39 +1.8 4,714,924 + AO353_21535 0.40 -0.2 4,714,925 - AO353_21535 0.40 +0.8 4,715,104 + AO353_21535 0.50 -0.2 4,715,104 + AO353_21535 0.50 -1.4 4,715,104 + AO353_21535 0.50 +0.7 4,715,104 + AO353_21535 0.50 +1.4 4,715,105 - AO353_21535 0.50 +0.6 4,715,105 - AO353_21535 0.50 +1.7 4,715,105 - AO353_21535 0.50 -0.0 4,715,144 + AO353_21535 0.52 +0.4 4,715,144 + AO353_21535 0.52 +0.8 4,715,144 + AO353_21535 0.52 -0.2 4,715,144 + AO353_21535 0.52 +1.4 4,715,144 + AO353_21535 0.52 +1.4 4,715,144 + AO353_21535 0.52 +0.7 4,715,145 - AO353_21535 0.52 +0.2 4,715,145 - AO353_21535 0.52 -0.7 4,715,145 - AO353_21535 0.52 -0.2 4,715,145 - AO353_21535 0.52 -0.7 4,715,145 - AO353_21535 0.52 -0.2 4,715,150 + AO353_21535 0.53 +0.6 4,715,150 + AO353_21535 0.53 -0.6 4,715,151 - AO353_21535 0.53 +0.3 4,715,151 - AO353_21535 0.53 -0.4 4,715,225 + AO353_21535 0.57 -1.1 4,715,225 + AO353_21535 0.57 -0.6 4,715,226 - AO353_21535 0.57 +2.2
Or see this region's nucleotide sequence