Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19755 and AO353_19760 are separated by 97 nucleotides AO353_19760 and AO353_19765 are separated by 94 nucleotides
AO353_19755: AO353_19755 - cytosine deaminase, at 4,343,132 to 4,344,370
_19755
AO353_19760: AO353_19760 - 6-carboxy-5,6,7,8-tetrahydropterin synthase, at 4,344,468 to 4,344,824
_19760
AO353_19765: AO353_19765 - hypothetical protein, at 4,344,919 to 4,345,998
_19765
Position (kb)
4344
4345 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4343.616 kb on + strand, within AO353_19755 at 4343.616 kb on + strand, within AO353_19755 at 4343.617 kb on - strand, within AO353_19755 at 4343.629 kb on - strand, within AO353_19755 at 4343.629 kb on - strand, within AO353_19755 at 4343.823 kb on + strand, within AO353_19755 at 4343.823 kb on + strand, within AO353_19755 at 4343.823 kb on + strand, within AO353_19755 at 4344.420 kb on + strand at 4344.421 kb on - strand at 4344.421 kb on - strand at 4344.421 kb on - strand at 4344.421 kb on - strand at 4344.426 kb on + strand at 4344.426 kb on + strand at 4344.426 kb on + strand at 4344.469 kb on + strand at 4344.470 kb on - strand at 4344.470 kb on - strand at 4344.481 kb on + strand at 4344.481 kb on + strand at 4344.481 kb on + strand at 4344.481 kb on + strand at 4344.481 kb on + strand at 4344.482 kb on - strand at 4344.482 kb on - strand at 4344.616 kb on + strand, within AO353_19760 at 4344.616 kb on + strand, within AO353_19760 at 4344.616 kb on + strand, within AO353_19760 at 4344.616 kb on + strand, within AO353_19760 at 4344.616 kb on + strand, within AO353_19760 at 4344.617 kb on - strand, within AO353_19760 at 4344.617 kb on - strand, within AO353_19760 at 4344.617 kb on - strand, within AO353_19760 at 4344.803 kb on + strand at 4344.803 kb on + strand at 4344.883 kb on + strand at 4344.920 kb on + strand at 4344.920 kb on + strand at 4344.920 kb on + strand at 4344.921 kb on - strand at 4344.921 kb on - strand at 4345.016 kb on + strand at 4345.017 kb on - strand at 4345.072 kb on + strand, within AO353_19765 at 4345.101 kb on - strand, within AO353_19765 at 4345.101 kb on - strand, within AO353_19765 at 4345.238 kb on + strand, within AO353_19765 at 4345.238 kb on + strand, within AO353_19765 at 4345.256 kb on + strand, within AO353_19765 at 4345.256 kb on + strand, within AO353_19765 at 4345.257 kb on - strand, within AO353_19765 at 4345.257 kb on - strand, within AO353_19765 at 4345.281 kb on - strand, within AO353_19765 at 4345.281 kb on - strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.707 kb on - strand, within AO353_19765
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 4,343,616 + AO353_19755 0.39 +1.5 4,343,616 + AO353_19755 0.39 -1.1 4,343,617 - AO353_19755 0.39 +0.2 4,343,629 - AO353_19755 0.40 -1.1 4,343,629 - AO353_19755 0.40 -0.5 4,343,823 + AO353_19755 0.56 +0.9 4,343,823 + AO353_19755 0.56 +0.9 4,343,823 + AO353_19755 0.56 +0.5 4,344,420 + +1.9 4,344,421 - -1.1 4,344,421 - +0.2 4,344,421 - -0.9 4,344,421 - +2.2 4,344,426 + +0.7 4,344,426 + -2.1 4,344,426 + +1.0 4,344,469 + +1.5 4,344,470 - -1.7 4,344,470 - -0.1 4,344,481 + -1.7 4,344,481 + -1.1 4,344,481 + +0.1 4,344,481 + -1.7 4,344,481 + -0.5 4,344,482 - +0.5 4,344,482 - +2.5 4,344,616 + AO353_19760 0.41 +1.5 4,344,616 + AO353_19760 0.41 +1.0 4,344,616 + AO353_19760 0.41 +0.9 4,344,616 + AO353_19760 0.41 +2.5 4,344,616 + AO353_19760 0.41 +0.5 4,344,617 - AO353_19760 0.42 -1.1 4,344,617 - AO353_19760 0.42 -0.1 4,344,617 - AO353_19760 0.42 +0.9 4,344,803 + -1.1 4,344,803 + -0.1 4,344,883 + +0.1 4,344,920 + +0.4 4,344,920 + +1.5 4,344,920 + -0.5 4,344,921 - +0.9 4,344,921 - +0.2 4,345,016 + -0.1 4,345,017 - -0.1 4,345,072 + AO353_19765 0.14 +0.9 4,345,101 - AO353_19765 0.17 -1.1 4,345,101 - AO353_19765 0.17 +0.9 4,345,238 + AO353_19765 0.30 -0.7 4,345,238 + AO353_19765 0.30 +1.8 4,345,256 + AO353_19765 0.31 -0.4 4,345,256 + AO353_19765 0.31 +2.2 4,345,257 - AO353_19765 0.31 -0.5 4,345,257 - AO353_19765 0.31 +1.9 4,345,281 - AO353_19765 0.34 -0.7 4,345,281 - AO353_19765 0.34 +0.2 4,345,312 + AO353_19765 0.36 -0.1 4,345,312 + AO353_19765 0.36 +0.2 4,345,312 + AO353_19765 0.36 +0.6 4,345,312 + AO353_19765 0.36 +0.9 4,345,312 + AO353_19765 0.36 +0.2 4,345,312 + AO353_19765 0.36 +0.3 4,345,313 - AO353_19765 0.36 +0.5 4,345,313 - AO353_19765 0.36 +0.3 4,345,313 - AO353_19765 0.36 +1.9 4,345,313 - AO353_19765 0.36 -2.7 4,345,313 - AO353_19765 0.36 +0.5 4,345,313 - AO353_19765 0.36 -0.5 4,345,706 + AO353_19765 0.73 +2.9 4,345,706 + AO353_19765 0.73 -1.6 4,345,706 + AO353_19765 0.73 -2.1 4,345,706 + AO353_19765 0.73 -1.1 4,345,706 + AO353_19765 0.73 +1.5 4,345,706 + AO353_19765 0.73 -0.1 4,345,707 - AO353_19765 0.73 -1.1
Or see this region's nucleotide sequence