Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17745

Experiment: Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_17740 and AO353_17745 are separated by 196 nucleotidesAO353_17745 and AO353_17750 are separated by 119 nucleotidesAO353_17750 and AO353_17755 are separated by 176 nucleotides AO353_17740: AO353_17740 - hypothetical protein, at 3,907,619 to 3,909,064 _17740 AO353_17745: AO353_17745 - MFS transporter, at 3,909,261 to 3,910,679 _17745 AO353_17750: AO353_17750 - transcriptional regulator, at 3,910,799 to 3,911,452 _17750 AO353_17755: AO353_17755 - ornithinee aminotransferase, at 3,911,629 to 3,912,957 _17755 Position (kb) 3909 3910 3911Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3908.445 kb on + strand, within AO353_17740at 3908.510 kb on + strand, within AO353_17740at 3908.510 kb on + strand, within AO353_17740at 3908.510 kb on + strand, within AO353_17740at 3908.510 kb on + strand, within AO353_17740at 3908.511 kb on - strand, within AO353_17740at 3908.511 kb on - strand, within AO353_17740at 3908.536 kb on + strand, within AO353_17740at 3908.536 kb on + strand, within AO353_17740at 3908.536 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.780 kb on + strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.781 kb on - strand, within AO353_17740at 3908.978 kb on + strandat 3908.979 kb on - strandat 3909.065 kb on + strandat 3909.065 kb on + strandat 3909.066 kb on - strandat 3909.155 kb on + strandat 3909.155 kb on + strandat 3909.155 kb on + strandat 3909.156 kb on - strandat 3909.184 kb on - strandat 3909.184 kb on - strandat 3909.207 kb on - strandat 3909.207 kb on - strandat 3909.207 kb on - strandat 3909.207 kb on - strandat 3909.207 kb on - strandat 3909.243 kb on - strandat 3909.335 kb on + strandat 3909.335 kb on + strandat 3909.336 kb on - strandat 3909.459 kb on + strand, within AO353_17745at 3909.459 kb on + strand, within AO353_17745at 3909.459 kb on + strand, within AO353_17745at 3909.459 kb on + strand, within AO353_17745at 3909.459 kb on + strand, within AO353_17745at 3909.460 kb on - strand, within AO353_17745at 3909.460 kb on - strand, within AO353_17745at 3909.460 kb on - strand, within AO353_17745at 3909.460 kb on - strand, within AO353_17745at 3909.460 kb on - strand, within AO353_17745at 3909.657 kb on + strand, within AO353_17745at 3909.657 kb on + strand, within AO353_17745at 3909.808 kb on + strand, within AO353_17745at 3909.808 kb on + strand, within AO353_17745at 3909.808 kb on + strand, within AO353_17745at 3909.809 kb on - strand, within AO353_17745at 3909.809 kb on - strand, within AO353_17745at 3909.862 kb on + strand, within AO353_17745at 3909.973 kb on - strand, within AO353_17745at 3909.973 kb on - strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.108 kb on - strand, within AO353_17745at 3910.108 kb on - strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.301 kb on - strand, within AO353_17745at 3910.301 kb on - strand, within AO353_17745at 3910.301 kb on - strand, within AO353_17745at 3910.410 kb on + strand, within AO353_17745at 3910.426 kb on + strand, within AO353_17745at 3910.426 kb on + strand, within AO353_17745at 3910.519 kb on + strand, within AO353_17745at 3910.519 kb on + strand, within AO353_17745at 3910.519 kb on + strand, within AO353_17745at 3910.520 kb on - strand, within AO353_17745at 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.577 kb on - strandat 3910.577 kb on - strandat 3910.580 kb on + strandat 3910.580 kb on + strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.648 kb on - strandat 3910.648 kb on - strandat 3910.673 kb on + strandat 3910.673 kb on + strandat 3910.673 kb on + strandat 3910.673 kb on + strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3911.168 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.247 kb on - strand, within AO353_17750at 3911.247 kb on - strand, within AO353_17750at 3911.440 kb on + strandat 3911.441 kb on - strandat 3911.441 kb on - strandat 3911.466 kb on + strandat 3911.467 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml
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3,908,445 + AO353_17740 0.57 +2.3
3,908,510 + AO353_17740 0.62 +1.0
3,908,510 + AO353_17740 0.62 +1.0
3,908,510 + AO353_17740 0.62 -1.6
3,908,510 + AO353_17740 0.62 -0.0
3,908,511 - AO353_17740 0.62 -0.3
3,908,511 - AO353_17740 0.62 -0.0
3,908,536 + AO353_17740 0.63 +0.5
3,908,536 + AO353_17740 0.63 -1.4
3,908,536 + AO353_17740 0.63 +1.0
3,908,780 + AO353_17740 0.80 +1.2
3,908,780 + AO353_17740 0.80 +1.0
3,908,780 + AO353_17740 0.80 -1.0
3,908,780 + AO353_17740 0.80 -1.6
3,908,780 + AO353_17740 0.80 +1.4
3,908,780 + AO353_17740 0.80 +1.0
3,908,780 + AO353_17740 0.80 +0.8
3,908,780 + AO353_17740 0.80 +1.0
3,908,780 + AO353_17740 0.80 -0.0
3,908,780 + AO353_17740 0.80 +3.1
3,908,781 - AO353_17740 0.80 +1.2
3,908,781 - AO353_17740 0.80 -1.0
3,908,781 - AO353_17740 0.80 +1.0
3,908,781 - AO353_17740 0.80 -0.3
3,908,781 - AO353_17740 0.80 +0.9
3,908,781 - AO353_17740 0.80 -0.0
3,908,781 - AO353_17740 0.80 +1.3
3,908,781 - AO353_17740 0.80 +1.0
3,908,978 + +1.0
3,908,979 - -0.6
3,909,065 + +0.3
3,909,065 + +1.0
3,909,066 - +1.2
3,909,155 + +1.5
3,909,155 + +0.2
3,909,155 + -0.3
3,909,156 - -0.4
3,909,184 - -0.0
3,909,184 - -0.6
3,909,207 - -0.0
3,909,207 - -0.0
3,909,207 - +0.6
3,909,207 - -0.0
3,909,207 - +1.3
3,909,243 - -0.0
3,909,335 + -0.0
3,909,335 + +1.0
3,909,336 - -0.0
3,909,459 + AO353_17745 0.14 -0.7
3,909,459 + AO353_17745 0.14 -1.4
3,909,459 + AO353_17745 0.14 -0.2
3,909,459 + AO353_17745 0.14 +2.0
3,909,459 + AO353_17745 0.14 -0.0
3,909,460 - AO353_17745 0.14 -1.3
3,909,460 - AO353_17745 0.14 -1.4
3,909,460 - AO353_17745 0.14 +1.0
3,909,460 - AO353_17745 0.14 -1.6
3,909,460 - AO353_17745 0.14 -2.0
3,909,657 + AO353_17745 0.28 -0.8
3,909,657 + AO353_17745 0.28 -2.8
3,909,808 + AO353_17745 0.39 +1.2
3,909,808 + AO353_17745 0.39 +2.0
3,909,808 + AO353_17745 0.39 -1.0
3,909,809 - AO353_17745 0.39 -1.0
3,909,809 - AO353_17745 0.39 -0.3
3,909,862 + AO353_17745 0.42 -1.0
3,909,973 - AO353_17745 0.50 -0.0
3,909,973 - AO353_17745 0.50 -1.0
3,910,107 + AO353_17745 0.60 -0.6
3,910,107 + AO353_17745 0.60 +2.0
3,910,107 + AO353_17745 0.60 +0.7
3,910,107 + AO353_17745 0.60 +0.5
3,910,108 - AO353_17745 0.60 -1.5
3,910,108 - AO353_17745 0.60 -0.0
3,910,125 + AO353_17745 0.61 +1.0
3,910,125 + AO353_17745 0.61 +0.8
3,910,125 + AO353_17745 0.61 +0.5
3,910,125 + AO353_17745 0.61 -1.0
3,910,125 + AO353_17745 0.61 -0.0
3,910,125 + AO353_17745 0.61 -1.9
3,910,125 + AO353_17745 0.61 +0.5
3,910,125 + AO353_17745 0.61 -0.0
3,910,125 + AO353_17745 0.61 -2.0
3,910,125 + AO353_17745 0.61 -0.6
3,910,125 + AO353_17745 0.61 -0.0
3,910,125 + AO353_17745 0.61 -1.0
3,910,126 - AO353_17745 0.61 +0.2
3,910,126 - AO353_17745 0.61 -0.8
3,910,126 - AO353_17745 0.61 -0.0
3,910,126 - AO353_17745 0.61 +1.0
3,910,126 - AO353_17745 0.61 -1.0
3,910,126 - AO353_17745 0.61 -0.0
3,910,126 - AO353_17745 0.61 -0.0
3,910,126 - AO353_17745 0.61 -0.0
3,910,126 - AO353_17745 0.61 -1.4
3,910,126 - AO353_17745 0.61 -0.9
3,910,126 - AO353_17745 0.61 -1.6
3,910,126 - AO353_17745 0.61 -0.4
3,910,126 - AO353_17745 0.61 -0.9
3,910,126 - AO353_17745 0.61 -0.5
3,910,126 - AO353_17745 0.61 +0.4
3,910,126 - AO353_17745 0.61 -0.3
3,910,126 - AO353_17745 0.61 -0.5
3,910,129 + AO353_17745 0.61 +0.6
3,910,129 + AO353_17745 0.61 -1.4
3,910,129 + AO353_17745 0.61 -0.0
3,910,129 + AO353_17745 0.61 -0.6
3,910,129 + AO353_17745 0.61 -0.0
3,910,129 + AO353_17745 0.61 +2.8
3,910,129 + AO353_17745 0.61 -0.0
3,910,129 + AO353_17745 0.61 +1.5
3,910,129 + AO353_17745 0.61 +0.1
3,910,130 - AO353_17745 0.61 -1.6
3,910,130 - AO353_17745 0.61 -0.4
3,910,130 - AO353_17745 0.61 -0.7
3,910,130 - AO353_17745 0.61 -0.0
3,910,130 - AO353_17745 0.61 -0.0
3,910,130 - AO353_17745 0.61 -1.6
3,910,130 - AO353_17745 0.61 +2.3
3,910,130 - AO353_17745 0.61 -0.0
3,910,130 - AO353_17745 0.61 -0.8
3,910,301 - AO353_17745 0.73 -0.0
3,910,301 - AO353_17745 0.73 -0.6
3,910,301 - AO353_17745 0.73 -0.5
3,910,410 + AO353_17745 0.81 -1.6
3,910,426 + AO353_17745 0.82 +0.2
3,910,426 + AO353_17745 0.82 +0.3
3,910,519 + AO353_17745 0.89 -1.0
3,910,519 + AO353_17745 0.89 +0.7
3,910,519 + AO353_17745 0.89 -1.0
3,910,520 - AO353_17745 0.89 -0.6
3,910,576 + -0.6
3,910,576 + +1.0
3,910,576 + +2.3
3,910,576 + -3.5
3,910,576 + +1.0
3,910,576 + -1.0
3,910,576 + -0.5
3,910,577 - +0.5
3,910,577 - -0.0
3,910,580 + -1.6
3,910,580 + -0.0
3,910,581 - +0.5
3,910,581 - -0.6
3,910,581 - -0.0
3,910,581 - -1.6
3,910,581 - +1.3
3,910,581 - -0.8
3,910,647 + -1.3
3,910,647 + -0.0
3,910,647 + +1.5
3,910,647 + +0.5
3,910,647 + -0.0
3,910,648 - +1.0
3,910,648 - -1.8
3,910,673 + -0.0
3,910,673 + -0.0
3,910,673 + -0.0
3,910,673 + +1.0
3,910,674 - -1.0
3,910,674 - -0.0
3,910,674 - -1.2
3,910,674 - -1.0
3,910,674 - -0.0
3,910,679 + +2.3
3,910,679 + -1.0
3,910,679 + -0.5
3,910,679 + -0.0
3,910,679 + +0.3
3,910,679 + -0.0
3,910,679 + +0.4
3,910,679 + -0.6
3,910,679 + -1.0
3,910,679 + +0.5
3,910,679 + -1.0
3,910,679 + -0.8
3,910,679 + -0.0
3,910,679 + -1.6
3,910,679 + +0.6
3,910,679 + -0.5
3,910,679 + -0.0
3,910,679 + +0.5
3,910,679 + +1.0
3,910,679 + +1.0
3,910,679 + -0.0
3,910,679 + -1.6
3,910,680 - +2.3
3,910,680 - +2.3
3,910,680 - -0.6
3,910,680 - -0.0
3,910,680 - -2.8
3,910,680 - -1.0
3,910,680 - +1.0
3,910,680 - -1.0
3,910,680 - -0.2
3,910,680 - +0.1
3,910,680 - -2.4
3,910,680 - -0.5
3,910,680 - -0.5
3,910,680 - +1.5
3,910,680 - -1.0
3,910,680 - -1.0
3,910,680 - +2.0
3,910,680 - -1.0
3,910,680 - -0.7
3,910,680 - +1.5
3,910,680 - -0.5
3,910,680 - +1.5
3,910,680 - -1.6
3,910,680 - +1.8
3,910,680 - -0.0
3,910,680 - +0.5
3,910,680 - -0.9
3,910,680 - -0.5
3,910,680 - +0.5
3,910,680 - +1.0
3,910,680 - +0.5
3,910,680 - -2.0
3,910,680 - +1.0
3,910,680 - -1.0
3,910,680 - -0.9
3,910,680 - -0.5
3,911,168 + AO353_17750 0.56 +1.0
3,911,246 + AO353_17750 0.68 +2.1
3,911,246 + AO353_17750 0.68 +2.8
3,911,246 + AO353_17750 0.68 -2.0
3,911,246 + AO353_17750 0.68 -0.0
3,911,247 - AO353_17750 0.69 +3.0
3,911,247 - AO353_17750 0.69 +2.7
3,911,440 + +2.3
3,911,441 - +2.4
3,911,441 - +2.4
3,911,466 + +2.0
3,911,467 - +1.3

Or see this region's nucleotide sequence