Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09775 and AO353_09780 are separated by 281 nucleotides AO353_09780 and AO353_09785 are separated by 66 nucleotides AO353_09785 and AO353_09790 are separated by 91 nucleotides
AO353_09775: AO353_09775 - hypothetical protein, at 2,141,485 to 2,142,108
_09775
AO353_09780: AO353_09780 - hypothetical protein, at 2,142,390 to 2,142,878
_09780
AO353_09785: AO353_09785 - hypothetical protein, at 2,142,945 to 2,143,250
_09785
AO353_09790: AO353_09790 - hypothetical protein, at 2,143,342 to 2,144,352
_09790
Position (kb)
2142
2143
2144 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2142.022 kb on + strand, within AO353_09775 at 2142.142 kb on + strand at 2142.183 kb on - strand at 2142.385 kb on + strand at 2142.386 kb on - strand at 2142.410 kb on + strand at 2142.410 kb on + strand at 2142.439 kb on + strand, within AO353_09780 at 2142.439 kb on + strand, within AO353_09780 at 2142.440 kb on - strand, within AO353_09780 at 2142.440 kb on - strand, within AO353_09780 at 2142.440 kb on - strand, within AO353_09780 at 2142.440 kb on - strand, within AO353_09780 at 2142.440 kb on - strand, within AO353_09780 at 2142.440 kb on - strand, within AO353_09780 at 2142.442 kb on + strand, within AO353_09780 at 2142.442 kb on + strand, within AO353_09780 at 2142.442 kb on + strand, within AO353_09780 at 2142.442 kb on + strand, within AO353_09780 at 2142.443 kb on - strand, within AO353_09780 at 2142.443 kb on - strand, within AO353_09780 at 2142.443 kb on - strand, within AO353_09780 at 2142.443 kb on - strand, within AO353_09780 at 2142.445 kb on + strand, within AO353_09780 at 2142.446 kb on - strand, within AO353_09780 at 2142.446 kb on - strand, within AO353_09780 at 2142.543 kb on + strand, within AO353_09780 at 2142.544 kb on - strand, within AO353_09780 at 2142.544 kb on - strand, within AO353_09780 at 2142.544 kb on - strand, within AO353_09780 at 2142.568 kb on + strand, within AO353_09780 at 2142.568 kb on + strand, within AO353_09780 at 2142.569 kb on - strand, within AO353_09780 at 2142.569 kb on - strand, within AO353_09780 at 2142.613 kb on + strand, within AO353_09780 at 2142.614 kb on - strand, within AO353_09780 at 2142.619 kb on - strand, within AO353_09780 at 2142.630 kb on + strand, within AO353_09780 at 2142.630 kb on + strand, within AO353_09780 at 2142.745 kb on + strand, within AO353_09780 at 2142.749 kb on - strand, within AO353_09780 at 2142.936 kb on - strand at 2143.016 kb on + strand, within AO353_09785 at 2143.036 kb on - strand, within AO353_09785 at 2143.095 kb on + strand, within AO353_09785 at 2143.096 kb on - strand, within AO353_09785 at 2143.096 kb on - strand, within AO353_09785 at 2143.191 kb on - strand, within AO353_09785 at 2143.191 kb on - strand, within AO353_09785 at 2143.237 kb on - strand at 2143.255 kb on - strand at 2143.255 kb on - strand at 2143.255 kb on - strand at 2143.267 kb on - strand at 2143.310 kb on + strand at 2143.325 kb on - strand at 2143.348 kb on - strand at 2143.349 kb on + strand at 2143.366 kb on + strand at 2143.366 kb on + strand at 2143.489 kb on + strand, within AO353_09790 at 2143.490 kb on - strand, within AO353_09790 at 2143.490 kb on - strand, within AO353_09790 at 2143.490 kb on - strand, within AO353_09790 at 2143.521 kb on - strand, within AO353_09790 at 2143.573 kb on + strand, within AO353_09790 at 2143.573 kb on + strand, within AO353_09790 at 2143.574 kb on - strand, within AO353_09790 at 2143.574 kb on - strand, within AO353_09790 at 2143.654 kb on - strand, within AO353_09790 at 2143.677 kb on - strand, within AO353_09790 at 2143.726 kb on + strand, within AO353_09790 at 2143.726 kb on + strand, within AO353_09790 at 2143.728 kb on + strand, within AO353_09790 at 2143.728 kb on + strand, within AO353_09790 at 2143.728 kb on + strand, within AO353_09790 at 2143.728 kb on + strand, within AO353_09790 at 2143.729 kb on - strand, within AO353_09790 at 2143.864 kb on + strand, within AO353_09790 at 2143.901 kb on + strand, within AO353_09790 at 2144.021 kb on + strand, within AO353_09790 at 2144.021 kb on + strand, within AO353_09790 at 2144.035 kb on + strand, within AO353_09790 at 2144.035 kb on + strand, within AO353_09790 at 2144.057 kb on + strand, within AO353_09790 at 2144.124 kb on + strand, within AO353_09790 at 2144.129 kb on + strand, within AO353_09790
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 2,142,022 + AO353_09775 0.86 -0.1 2,142,142 + +1.1 2,142,183 - -1.0 2,142,385 + -0.2 2,142,386 - +0.8 2,142,410 + +0.4 2,142,410 + -0.4 2,142,439 + AO353_09780 0.10 -0.2 2,142,439 + AO353_09780 0.10 -0.3 2,142,440 - AO353_09780 0.10 -0.3 2,142,440 - AO353_09780 0.10 +1.7 2,142,440 - AO353_09780 0.10 -0.6 2,142,440 - AO353_09780 0.10 +1.3 2,142,440 - AO353_09780 0.10 +2.4 2,142,440 - AO353_09780 0.10 +0.6 2,142,442 + AO353_09780 0.11 -1.2 2,142,442 + AO353_09780 0.11 -1.2 2,142,442 + AO353_09780 0.11 -0.9 2,142,442 + AO353_09780 0.11 +1.4 2,142,443 - AO353_09780 0.11 -1.6 2,142,443 - AO353_09780 0.11 -0.4 2,142,443 - AO353_09780 0.11 +0.1 2,142,443 - AO353_09780 0.11 -0.0 2,142,445 + AO353_09780 0.11 +0.4 2,142,446 - AO353_09780 0.11 +1.0 2,142,446 - AO353_09780 0.11 -2.1 2,142,543 + AO353_09780 0.31 +1.2 2,142,544 - AO353_09780 0.31 +1.0 2,142,544 - AO353_09780 0.31 +1.1 2,142,544 - AO353_09780 0.31 +0.8 2,142,568 + AO353_09780 0.36 +0.7 2,142,568 + AO353_09780 0.36 +0.6 2,142,569 - AO353_09780 0.37 +0.4 2,142,569 - AO353_09780 0.37 -0.8 2,142,613 + AO353_09780 0.46 +0.2 2,142,614 - AO353_09780 0.46 +0.6 2,142,619 - AO353_09780 0.47 +2.0 2,142,630 + AO353_09780 0.49 -0.6 2,142,630 + AO353_09780 0.49 +1.1 2,142,745 + AO353_09780 0.73 +2.2 2,142,749 - AO353_09780 0.73 +0.1 2,142,936 - +0.8 2,143,016 + AO353_09785 0.23 -2.6 2,143,036 - AO353_09785 0.30 -0.6 2,143,095 + AO353_09785 0.49 -1.0 2,143,096 - AO353_09785 0.49 +0.6 2,143,096 - AO353_09785 0.49 +0.4 2,143,191 - AO353_09785 0.80 +1.0 2,143,191 - AO353_09785 0.80 -0.6 2,143,237 - -0.3 2,143,255 - +1.0 2,143,255 - -1.4 2,143,255 - -0.6 2,143,267 - -1.6 2,143,310 + -0.0 2,143,325 - +0.8 2,143,348 - +0.4 2,143,349 + +1.2 2,143,366 + +2.4 2,143,366 + -2.8 2,143,489 + AO353_09790 0.15 -0.5 2,143,490 - AO353_09790 0.15 -1.6 2,143,490 - AO353_09790 0.15 -0.0 2,143,490 - AO353_09790 0.15 +0.4 2,143,521 - AO353_09790 0.18 +0.2 2,143,573 + AO353_09790 0.23 +1.4 2,143,573 + AO353_09790 0.23 +1.6 2,143,574 - AO353_09790 0.23 +1.4 2,143,574 - AO353_09790 0.23 +1.1 2,143,654 - AO353_09790 0.31 +2.0 2,143,677 - AO353_09790 0.33 +0.8 2,143,726 + AO353_09790 0.38 -0.6 2,143,726 + AO353_09790 0.38 +0.6 2,143,728 + AO353_09790 0.38 -2.2 2,143,728 + AO353_09790 0.38 +0.4 2,143,728 + AO353_09790 0.38 -0.2 2,143,728 + AO353_09790 0.38 -0.0 2,143,729 - AO353_09790 0.38 +0.9 2,143,864 + AO353_09790 0.52 -1.6 2,143,901 + AO353_09790 0.55 -0.6 2,144,021 + AO353_09790 0.67 +1.4 2,144,021 + AO353_09790 0.67 +0.9 2,144,035 + AO353_09790 0.69 +0.4 2,144,035 + AO353_09790 0.69 +1.0 2,144,057 + AO353_09790 0.71 +1.4 2,144,124 + AO353_09790 0.77 -0.2 2,144,129 + AO353_09790 0.78 -0.6
Or see this region's nucleotide sequence