Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06090 and AO353_06095 are separated by 109 nucleotides AO353_06095 and AO353_06100 are separated by 11 nucleotides AO353_06100 and AO353_06105 are separated by 614 nucleotides
AO353_06090: AO353_06090 - LysR family transcriptional regulator, at 1,358,892 to 1,359,812
_06090
AO353_06095: AO353_06095 - TetR family transcriptional regulator, at 1,359,922 to 1,360,572
_06095
AO353_06100: AO353_06100 - thymidylate synthase, at 1,360,584 to 1,361,165
_06100
AO353_06105: AO353_06105 - short-chain dehydrogenase, at 1,361,780 to 1,362,466
_06105
Position (kb)
1360
1361
1362 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1359.636 kb on + strand, within AO353_06090 at 1359.637 kb on - strand, within AO353_06090 at 1359.637 kb on - strand, within AO353_06090 at 1359.637 kb on - strand, within AO353_06090 at 1359.637 kb on - strand, within AO353_06090 at 1359.637 kb on - strand, within AO353_06090 at 1359.646 kb on - strand, within AO353_06090 at 1359.660 kb on + strand, within AO353_06090 at 1359.720 kb on + strand, within AO353_06090 at 1359.720 kb on + strand, within AO353_06090 at 1359.720 kb on + strand, within AO353_06090 at 1359.720 kb on + strand, within AO353_06090 at 1359.720 kb on + strand, within AO353_06090 at 1359.721 kb on - strand at 1359.721 kb on - strand at 1359.844 kb on - strand at 1359.844 kb on - strand at 1359.951 kb on + strand at 1359.951 kb on + strand at 1359.952 kb on - strand at 1359.952 kb on - strand at 1359.952 kb on - strand at 1359.952 kb on - strand at 1360.093 kb on + strand, within AO353_06095 at 1360.093 kb on + strand, within AO353_06095 at 1360.093 kb on + strand, within AO353_06095 at 1360.093 kb on + strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.094 kb on - strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.096 kb on + strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.097 kb on - strand, within AO353_06095 at 1360.120 kb on + strand, within AO353_06095 at 1360.120 kb on + strand, within AO353_06095 at 1360.120 kb on + strand, within AO353_06095 at 1360.120 kb on + strand, within AO353_06095 at 1360.120 kb on + strand, within AO353_06095 at 1360.120 kb on + strand, within AO353_06095 at 1360.121 kb on - strand, within AO353_06095 at 1360.121 kb on - strand, within AO353_06095 at 1360.121 kb on - strand, within AO353_06095 at 1360.121 kb on - strand, within AO353_06095 at 1360.121 kb on - strand, within AO353_06095 at 1360.121 kb on - strand, within AO353_06095 at 1360.167 kb on + strand, within AO353_06095 at 1360.168 kb on - strand, within AO353_06095 at 1360.168 kb on - strand, within AO353_06095 at 1360.168 kb on - strand, within AO353_06095 at 1360.176 kb on + strand, within AO353_06095 at 1360.176 kb on + strand, within AO353_06095 at 1360.214 kb on - strand, within AO353_06095 at 1360.309 kb on + strand, within AO353_06095 at 1360.309 kb on + strand, within AO353_06095 at 1360.394 kb on + strand, within AO353_06095 at 1360.394 kb on + strand, within AO353_06095 at 1360.394 kb on + strand, within AO353_06095 at 1360.395 kb on - strand, within AO353_06095 at 1360.395 kb on - strand, within AO353_06095 at 1360.395 kb on - strand, within AO353_06095 at 1360.442 kb on - strand, within AO353_06095 at 1360.442 kb on - strand, within AO353_06095 at 1360.483 kb on - strand, within AO353_06095 at 1360.522 kb on - strand at 1360.522 kb on - strand at 1360.522 kb on - strand at 1360.534 kb on - strand at 1360.542 kb on + strand at 1360.543 kb on - strand at 1360.543 kb on - strand at 1360.570 kb on + strand at 1360.570 kb on + strand at 1360.570 kb on + strand at 1360.570 kb on + strand at 1360.570 kb on + strand at 1360.571 kb on - strand at 1360.571 kb on - strand at 1360.571 kb on - strand at 1360.571 kb on - strand at 1360.571 kb on - strand at 1360.571 kb on - strand at 1360.571 kb on - strand at 1360.571 kb on - strand at 1360.592 kb on + strand at 1360.592 kb on + strand at 1360.592 kb on + strand at 1360.592 kb on + strand at 1360.906 kb on - strand, within AO353_06100 at 1360.922 kb on + strand, within AO353_06100 at 1360.922 kb on + strand, within AO353_06100 at 1360.923 kb on - strand, within AO353_06100 at 1361.109 kb on - strand at 1361.109 kb on - strand at 1361.240 kb on + strand at 1361.240 kb on + strand at 1361.241 kb on - strand at 1361.241 kb on - strand at 1361.425 kb on + strand at 1361.425 kb on + strand at 1361.425 kb on + strand at 1361.425 kb on + strand at 1361.426 kb on - strand at 1361.426 kb on - strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.427 kb on + strand at 1361.428 kb on - strand at 1361.428 kb on - strand at 1361.428 kb on - strand at 1361.428 kb on - strand at 1361.428 kb on - strand at 1361.437 kb on - strand at 1361.437 kb on - strand at 1361.437 kb on - strand at 1361.437 kb on - strand at 1361.437 kb on - strand at 1361.450 kb on - strand at 1361.450 kb on - strand at 1361.450 kb on - strand at 1361.458 kb on + strand at 1361.458 kb on + strand at 1361.459 kb on - strand at 1361.487 kb on + strand at 1361.487 kb on + strand at 1361.487 kb on + strand at 1361.487 kb on + strand at 1361.487 kb on + strand at 1361.488 kb on - strand at 1361.488 kb on - strand at 1361.488 kb on - strand at 1361.545 kb on + strand at 1361.621 kb on + strand at 1361.621 kb on + strand at 1361.621 kb on + strand at 1361.621 kb on + strand at 1361.621 kb on + strand at 1361.622 kb on - strand at 1361.622 kb on - strand at 1361.625 kb on + strand at 1361.626 kb on - strand at 1361.626 kb on - strand at 1361.626 kb on - strand at 1361.644 kb on + strand at 1361.644 kb on + strand at 1361.644 kb on + strand at 1361.644 kb on + strand at 1361.645 kb on - strand at 1361.645 kb on - strand at 1361.702 kb on + strand at 1361.703 kb on - strand at 1361.703 kb on - strand at 1361.726 kb on + strand at 1361.763 kb on + strand at 1361.763 kb on + strand at 1361.763 kb on + strand at 1361.764 kb on - strand at 1361.764 kb on - strand at 1361.764 kb on - strand at 1361.764 kb on - strand at 1361.785 kb on + strand at 1361.785 kb on + strand at 1361.786 kb on - strand at 1361.790 kb on + strand at 1361.791 kb on - strand at 1361.887 kb on + strand, within AO353_06105 at 1361.928 kb on + strand, within AO353_06105 at 1362.162 kb on + strand, within AO353_06105 at 1362.162 kb on + strand, within AO353_06105 at 1362.162 kb on + strand, within AO353_06105 at 1362.162 kb on + strand, within AO353_06105 at 1362.163 kb on - strand, within AO353_06105 at 1362.163 kb on - strand, within AO353_06105
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 1,359,636 + AO353_06090 0.81 +1.2 1,359,637 - AO353_06090 0.81 -0.4 1,359,637 - AO353_06090 0.81 +2.5 1,359,637 - AO353_06090 0.81 +0.5 1,359,637 - AO353_06090 0.81 +0.5 1,359,637 - AO353_06090 0.81 +1.5 1,359,646 - AO353_06090 0.82 -0.8 1,359,660 + AO353_06090 0.83 -0.1 1,359,720 + AO353_06090 0.90 +1.8 1,359,720 + AO353_06090 0.90 +0.9 1,359,720 + AO353_06090 0.90 +2.2 1,359,720 + AO353_06090 0.90 +0.2 1,359,720 + AO353_06090 0.90 +0.9 1,359,721 - -0.8 1,359,721 - -0.8 1,359,844 - -0.6 1,359,844 - +0.2 1,359,951 + +0.2 1,359,951 + +1.2 1,359,952 - +0.8 1,359,952 - -1.4 1,359,952 - +0.5 1,359,952 - +1.2 1,360,093 + AO353_06095 0.26 -0.2 1,360,093 + AO353_06095 0.26 +0.2 1,360,093 + AO353_06095 0.26 +0.2 1,360,093 + AO353_06095 0.26 +0.6 1,360,094 - AO353_06095 0.26 -0.2 1,360,094 - AO353_06095 0.26 +0.6 1,360,094 - AO353_06095 0.26 +0.7 1,360,094 - AO353_06095 0.26 -0.8 1,360,094 - AO353_06095 0.26 +0.5 1,360,094 - AO353_06095 0.26 +0.2 1,360,094 - AO353_06095 0.26 -1.4 1,360,094 - AO353_06095 0.26 +0.2 1,360,096 + AO353_06095 0.27 +0.8 1,360,096 + AO353_06095 0.27 +0.2 1,360,096 + AO353_06095 0.27 +2.8 1,360,096 + AO353_06095 0.27 +2.2 1,360,096 + AO353_06095 0.27 -0.4 1,360,096 + AO353_06095 0.27 +0.9 1,360,096 + AO353_06095 0.27 +1.2 1,360,096 + AO353_06095 0.27 +2.4 1,360,097 - AO353_06095 0.27 -0.4 1,360,097 - AO353_06095 0.27 -0.2 1,360,097 - AO353_06095 0.27 +0.2 1,360,097 - AO353_06095 0.27 +2.2 1,360,097 - AO353_06095 0.27 -1.4 1,360,097 - AO353_06095 0.27 +0.8 1,360,097 - AO353_06095 0.27 +0.2 1,360,097 - AO353_06095 0.27 +0.3 1,360,097 - AO353_06095 0.27 +0.3 1,360,097 - AO353_06095 0.27 +1.3 1,360,097 - AO353_06095 0.27 +1.2 1,360,097 - AO353_06095 0.27 +0.6 1,360,120 + AO353_06095 0.30 +0.7 1,360,120 + AO353_06095 0.30 +0.9 1,360,120 + AO353_06095 0.30 +1.9 1,360,120 + AO353_06095 0.30 -1.4 1,360,120 + AO353_06095 0.30 -0.4 1,360,120 + AO353_06095 0.30 +0.2 1,360,121 - AO353_06095 0.31 +0.3 1,360,121 - AO353_06095 0.31 +1.8 1,360,121 - AO353_06095 0.31 -0.8 1,360,121 - AO353_06095 0.31 +0.8 1,360,121 - AO353_06095 0.31 +2.2 1,360,121 - AO353_06095 0.31 -0.8 1,360,167 + AO353_06095 0.38 +0.6 1,360,168 - AO353_06095 0.38 +0.8 1,360,168 - AO353_06095 0.38 +0.6 1,360,168 - AO353_06095 0.38 +0.8 1,360,176 + AO353_06095 0.39 -0.8 1,360,176 + AO353_06095 0.39 +0.3 1,360,214 - AO353_06095 0.45 +1.8 1,360,309 + AO353_06095 0.59 -0.8 1,360,309 + AO353_06095 0.59 +0.2 1,360,394 + AO353_06095 0.73 +1.2 1,360,394 + AO353_06095 0.73 +0.2 1,360,394 + AO353_06095 0.73 -1.6 1,360,395 - AO353_06095 0.73 -0.1 1,360,395 - AO353_06095 0.73 +1.4 1,360,395 - AO353_06095 0.73 -0.4 1,360,442 - AO353_06095 0.80 +1.8 1,360,442 - AO353_06095 0.80 +2.2 1,360,483 - AO353_06095 0.86 +0.7 1,360,522 - +0.6 1,360,522 - +0.2 1,360,522 - -0.1 1,360,534 - +2.0 1,360,542 + -0.9 1,360,543 - -0.4 1,360,543 - +1.4 1,360,570 + +0.2 1,360,570 + +0.2 1,360,570 + -0.2 1,360,570 + +1.8 1,360,570 + +0.7 1,360,571 - +1.2 1,360,571 - -0.2 1,360,571 - +0.2 1,360,571 - -0.2 1,360,571 - +0.5 1,360,571 - -1.2 1,360,571 - +0.5 1,360,571 - +0.2 1,360,592 + +0.4 1,360,592 + -0.4 1,360,592 + -0.4 1,360,592 + +1.4 1,360,906 - AO353_06100 0.55 -0.3 1,360,922 + AO353_06100 0.58 +2.8 1,360,922 + AO353_06100 0.58 +1.8 1,360,923 - AO353_06100 0.58 +0.8 1,361,109 - +0.8 1,361,109 - +1.2 1,361,240 + -0.6 1,361,240 + -0.8 1,361,241 - -1.4 1,361,241 - -0.2 1,361,425 + +2.2 1,361,425 + +0.5 1,361,425 + -0.6 1,361,425 + -0.4 1,361,426 - +0.2 1,361,426 - -0.4 1,361,427 + +0.8 1,361,427 + +1.8 1,361,427 + +0.9 1,361,427 + -0.8 1,361,427 + -0.6 1,361,427 + -1.2 1,361,427 + +0.2 1,361,427 + -0.2 1,361,427 + +0.2 1,361,428 - +0.8 1,361,428 - -0.2 1,361,428 - -0.4 1,361,428 - +0.2 1,361,428 - -1.4 1,361,437 - -1.4 1,361,437 - +1.2 1,361,437 - +0.2 1,361,437 - +0.9 1,361,437 - +1.9 1,361,450 - +0.2 1,361,450 - +0.6 1,361,450 - +0.9 1,361,458 + +0.8 1,361,458 + -0.2 1,361,459 - -0.4 1,361,487 + +0.6 1,361,487 + +0.2 1,361,487 + +0.4 1,361,487 + +0.9 1,361,487 + +1.8 1,361,488 - +0.2 1,361,488 - +1.9 1,361,488 - -0.4 1,361,545 + -0.1 1,361,621 + -0.1 1,361,621 + +0.9 1,361,621 + -1.4 1,361,621 + +0.0 1,361,621 + +0.9 1,361,622 - +0.2 1,361,622 - +1.4 1,361,625 + +0.2 1,361,626 - -0.2 1,361,626 - -0.4 1,361,626 - +0.5 1,361,644 + -1.8 1,361,644 + -0.2 1,361,644 + -1.3 1,361,644 + -0.6 1,361,645 - +1.0 1,361,645 - -0.8 1,361,702 + -1.6 1,361,703 - +0.4 1,361,703 - +0.2 1,361,726 + +0.7 1,361,763 + +1.5 1,361,763 + -0.4 1,361,763 + -0.8 1,361,764 - +1.2 1,361,764 - -0.8 1,361,764 - +0.2 1,361,764 - +2.0 1,361,785 + +2.2 1,361,785 + -0.2 1,361,786 - +0.6 1,361,790 + -0.8 1,361,791 - -1.8 1,361,887 + AO353_06105 0.16 +0.9 1,361,928 + AO353_06105 0.22 -1.8 1,362,162 + AO353_06105 0.56 -0.4 1,362,162 + AO353_06105 0.56 +1.2 1,362,162 + AO353_06105 0.56 -0.5 1,362,162 + AO353_06105 0.56 -0.2 1,362,163 - AO353_06105 0.56 +1.2 1,362,163 - AO353_06105 0.56 -0.2
Or see this region's nucleotide sequence