Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04925 and AO353_04930 are separated by 195 nucleotides AO353_04930 and AO353_04935 are separated by 153 nucleotides AO353_04935 and AO353_04940 are separated by 54 nucleotides AO353_04940 and AO353_04945 are separated by 3 nucleotides
AO353_04925: AO353_04925 - aldolase, at 1,088,900 to 1,089,682
_04925
AO353_04930: AO353_04930 - flavodoxin, at 1,089,878 to 1,090,333
_04930
AO353_04935: AO353_04935 - histidine kinase, at 1,090,487 to 1,090,960
_04935
AO353_04940: AO353_04940 - hypothetical protein, at 1,091,015 to 1,091,620
_04940
AO353_04945: AO353_04945 - MerR family transcriptional regulator, at 1,091,624 to 1,092,574
_04945
Position (kb)
1090
1091 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1089.674 kb on + strand at 1089.702 kb on + strand at 1089.702 kb on + strand at 1089.703 kb on - strand at 1089.703 kb on - strand at 1089.703 kb on - strand at 1089.703 kb on - strand at 1089.703 kb on - strand at 1089.705 kb on + strand at 1089.706 kb on - strand at 1089.706 kb on - strand at 1089.708 kb on + strand at 1089.708 kb on + strand at 1089.709 kb on - strand at 1089.709 kb on - strand at 1089.709 kb on - strand at 1089.722 kb on + strand at 1089.723 kb on - strand at 1089.723 kb on - strand at 1089.723 kb on - strand at 1089.723 kb on - strand at 1089.733 kb on + strand at 1089.733 kb on + strand at 1089.734 kb on - strand at 1089.734 kb on - strand at 1089.734 kb on - strand at 1089.755 kb on + strand at 1089.755 kb on + strand at 1089.755 kb on + strand at 1089.755 kb on + strand at 1089.755 kb on + strand at 1089.755 kb on + strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.756 kb on - strand at 1089.776 kb on + strand at 1089.776 kb on + strand at 1089.776 kb on + strand at 1089.776 kb on + strand at 1090.036 kb on + strand, within AO353_04930 at 1090.036 kb on + strand, within AO353_04930 at 1090.037 kb on - strand, within AO353_04930 at 1090.037 kb on - strand, within AO353_04930 at 1090.044 kb on + strand, within AO353_04930 at 1090.044 kb on + strand, within AO353_04930 at 1090.045 kb on - strand, within AO353_04930 at 1090.123 kb on - strand, within AO353_04930 at 1090.302 kb on + strand at 1090.302 kb on + strand at 1090.302 kb on + strand at 1090.303 kb on - strand at 1090.303 kb on - strand at 1090.355 kb on + strand at 1090.355 kb on + strand at 1090.355 kb on + strand at 1090.355 kb on + strand at 1090.356 kb on - strand at 1090.356 kb on - strand at 1090.356 kb on - strand at 1090.371 kb on + strand at 1090.371 kb on + strand at 1090.410 kb on - strand at 1090.410 kb on - strand at 1090.410 kb on - strand at 1090.410 kb on - strand at 1090.447 kb on + strand at 1090.447 kb on + strand at 1090.447 kb on + strand at 1090.447 kb on + strand at 1090.447 kb on + strand at 1090.447 kb on + strand at 1090.448 kb on - strand at 1090.448 kb on - strand at 1090.448 kb on - strand at 1090.448 kb on - strand at 1090.448 kb on - strand at 1090.448 kb on - strand at 1090.448 kb on - strand at 1090.448 kb on - strand at 1090.580 kb on + strand, within AO353_04935 at 1090.580 kb on + strand, within AO353_04935 at 1090.580 kb on + strand, within AO353_04935 at 1090.580 kb on + strand, within AO353_04935 at 1090.580 kb on + strand, within AO353_04935 at 1090.580 kb on + strand, within AO353_04935 at 1090.580 kb on + strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.581 kb on - strand, within AO353_04935 at 1090.614 kb on - strand, within AO353_04935 at 1090.616 kb on - strand, within AO353_04935 at 1090.635 kb on - strand, within AO353_04935 at 1090.731 kb on + strand, within AO353_04935 at 1090.731 kb on + strand, within AO353_04935 at 1090.742 kb on + strand, within AO353_04935 at 1090.742 kb on + strand, within AO353_04935 at 1090.742 kb on + strand, within AO353_04935 at 1090.743 kb on - strand, within AO353_04935 at 1090.743 kb on - strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.817 kb on + strand, within AO353_04935 at 1090.818 kb on - strand, within AO353_04935 at 1090.818 kb on - strand, within AO353_04935 at 1090.818 kb on - strand, within AO353_04935 at 1090.818 kb on - strand, within AO353_04935 at 1090.818 kb on - strand, within AO353_04935 at 1090.818 kb on - strand, within AO353_04935 at 1090.818 kb on - strand, within AO353_04935 at 1090.893 kb on + strand, within AO353_04935 at 1090.894 kb on - strand, within AO353_04935 at 1090.894 kb on - strand, within AO353_04935 at 1090.914 kb on + strand at 1090.914 kb on + strand at 1090.914 kb on + strand at 1090.915 kb on - strand at 1090.915 kb on - strand at 1090.915 kb on - strand at 1090.959 kb on - strand at 1090.959 kb on - strand at 1090.959 kb on - strand at 1090.968 kb on + strand at 1090.968 kb on + strand at 1090.969 kb on - strand at 1090.969 kb on - strand at 1090.969 kb on - strand at 1090.969 kb on - strand at 1090.972 kb on + strand at 1090.972 kb on + strand at 1090.972 kb on + strand at 1090.972 kb on + strand at 1090.973 kb on - strand at 1090.973 kb on - strand at 1090.973 kb on - strand at 1090.973 kb on - strand at 1090.992 kb on + strand at 1090.992 kb on + strand at 1090.992 kb on + strand at 1090.992 kb on + strand at 1090.993 kb on - strand at 1090.996 kb on + strand at 1090.996 kb on + strand at 1090.997 kb on - strand at 1091.146 kb on - strand, within AO353_04940 at 1091.279 kb on + strand, within AO353_04940 at 1091.279 kb on + strand, within AO353_04940 at 1091.279 kb on + strand, within AO353_04940 at 1091.279 kb on + strand, within AO353_04940 at 1091.279 kb on + strand, within AO353_04940 at 1091.279 kb on + strand, within AO353_04940 at 1091.279 kb on + strand, within AO353_04940 at 1091.280 kb on - strand, within AO353_04940 at 1091.280 kb on - strand, within AO353_04940 at 1091.280 kb on - strand, within AO353_04940 at 1091.280 kb on - strand, within AO353_04940 at 1091.280 kb on - strand, within AO353_04940 at 1091.280 kb on - strand, within AO353_04940 at 1091.280 kb on - strand, within AO353_04940 at 1091.367 kb on + strand, within AO353_04940 at 1091.409 kb on + strand, within AO353_04940 at 1091.410 kb on - strand, within AO353_04940 at 1091.410 kb on - strand, within AO353_04940 at 1091.420 kb on - strand, within AO353_04940 at 1091.420 kb on - strand, within AO353_04940 at 1091.516 kb on + strand, within AO353_04940 at 1091.516 kb on + strand, within AO353_04940 at 1091.516 kb on + strand, within AO353_04940 at 1091.517 kb on - strand, within AO353_04940 at 1091.517 kb on - strand, within AO353_04940 at 1091.517 kb on - strand, within AO353_04940 at 1091.519 kb on + strand, within AO353_04940 at 1091.519 kb on + strand, within AO353_04940 at 1091.519 kb on + strand, within AO353_04940 at 1091.519 kb on + strand, within AO353_04940 at 1091.520 kb on - strand, within AO353_04940 at 1091.525 kb on + strand, within AO353_04940 at 1091.573 kb on + strand at 1091.573 kb on + strand at 1091.573 kb on + strand at 1091.573 kb on + strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.574 kb on - strand at 1091.692 kb on + strand at 1091.692 kb on + strand at 1091.693 kb on - strand at 1091.693 kb on - strand at 1091.693 kb on - strand at 1091.801 kb on - strand, within AO353_04945 at 1091.801 kb on - strand, within AO353_04945 at 1091.812 kb on + strand, within AO353_04945 at 1091.932 kb on + strand, within AO353_04945 at 1091.932 kb on + strand, within AO353_04945 at 1091.933 kb on - strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.934 kb on + strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945 at 1091.935 kb on - strand, within AO353_04945
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 1,089,674 + -1.9 1,089,702 + -0.5 1,089,702 + +0.9 1,089,703 - -0.9 1,089,703 - -0.9 1,089,703 - +1.3 1,089,703 - +0.1 1,089,703 - +0.1 1,089,705 + +1.7 1,089,706 - +1.1 1,089,706 - +0.1 1,089,708 + -2.5 1,089,708 + -0.3 1,089,709 - -0.2 1,089,709 - +4.0 1,089,709 - +0.1 1,089,722 + +0.1 1,089,723 - +0.7 1,089,723 - +0.8 1,089,723 - +1.4 1,089,723 - +1.1 1,089,733 + +1.7 1,089,733 + -0.5 1,089,734 - -0.4 1,089,734 - +0.7 1,089,734 - +0.1 1,089,755 + +1.7 1,089,755 + +0.8 1,089,755 + -0.9 1,089,755 + +0.8 1,089,755 + -1.3 1,089,755 + +0.8 1,089,756 - +0.7 1,089,756 - +1.2 1,089,756 - -0.4 1,089,756 - +0.6 1,089,756 - +0.1 1,089,756 - -0.5 1,089,756 - -0.9 1,089,756 - -1.5 1,089,756 - -1.9 1,089,756 - -0.9 1,089,776 + -0.2 1,089,776 + +0.1 1,089,776 + +1.1 1,089,776 + -0.6 1,090,036 + AO353_04930 0.35 +1.1 1,090,036 + AO353_04930 0.35 -0.9 1,090,037 - AO353_04930 0.35 -1.5 1,090,037 - AO353_04930 0.35 -2.2 1,090,044 + AO353_04930 0.36 +0.1 1,090,044 + AO353_04930 0.36 -0.4 1,090,045 - AO353_04930 0.37 +0.1 1,090,123 - AO353_04930 0.54 -1.3 1,090,302 + -1.5 1,090,302 + -1.5 1,090,302 + +0.1 1,090,303 - -3.2 1,090,303 - -0.9 1,090,355 + -0.5 1,090,355 + -1.8 1,090,355 + -1.2 1,090,355 + -0.9 1,090,356 - +0.1 1,090,356 - -3.2 1,090,356 - -0.1 1,090,371 + -0.5 1,090,371 + -0.9 1,090,410 - +2.2 1,090,410 - -1.2 1,090,410 - +1.1 1,090,410 - -0.4 1,090,447 + -0.5 1,090,447 + +0.1 1,090,447 + +0.1 1,090,447 + +0.7 1,090,447 + -0.9 1,090,447 + +1.1 1,090,448 - +1.4 1,090,448 - +2.1 1,090,448 - +1.1 1,090,448 - -0.2 1,090,448 - +1.1 1,090,448 - +1.2 1,090,448 - +1.1 1,090,448 - +1.4 1,090,580 + AO353_04935 0.20 +0.1 1,090,580 + AO353_04935 0.20 -0.7 1,090,580 + AO353_04935 0.20 +1.1 1,090,580 + AO353_04935 0.20 -0.9 1,090,580 + AO353_04935 0.20 -0.3 1,090,580 + AO353_04935 0.20 +1.1 1,090,580 + AO353_04935 0.20 +0.7 1,090,581 - AO353_04935 0.20 +1.7 1,090,581 - AO353_04935 0.20 -0.5 1,090,581 - AO353_04935 0.20 -0.2 1,090,581 - AO353_04935 0.20 +2.1 1,090,581 - AO353_04935 0.20 +2.1 1,090,581 - AO353_04935 0.20 +2.1 1,090,581 - AO353_04935 0.20 +0.8 1,090,581 - AO353_04935 0.20 +1.3 1,090,581 - AO353_04935 0.20 +0.1 1,090,581 - AO353_04935 0.20 -0.1 1,090,581 - AO353_04935 0.20 +1.9 1,090,581 - AO353_04935 0.20 +2.2 1,090,581 - AO353_04935 0.20 -0.9 1,090,581 - AO353_04935 0.20 +0.7 1,090,614 - AO353_04935 0.27 +0.5 1,090,616 - AO353_04935 0.27 -1.9 1,090,635 - AO353_04935 0.31 +0.1 1,090,731 + AO353_04935 0.51 +0.1 1,090,731 + AO353_04935 0.51 +1.1 1,090,742 + AO353_04935 0.54 +1.9 1,090,742 + AO353_04935 0.54 +1.1 1,090,742 + AO353_04935 0.54 +1.4 1,090,743 - AO353_04935 0.54 +1.1 1,090,743 - AO353_04935 0.54 +1.8 1,090,817 + AO353_04935 0.70 +0.7 1,090,817 + AO353_04935 0.70 -1.1 1,090,817 + AO353_04935 0.70 +1.1 1,090,817 + AO353_04935 0.70 -0.6 1,090,817 + AO353_04935 0.70 +2.6 1,090,817 + AO353_04935 0.70 -0.5 1,090,817 + AO353_04935 0.70 +1.1 1,090,817 + AO353_04935 0.70 +0.1 1,090,818 - AO353_04935 0.70 -0.9 1,090,818 - AO353_04935 0.70 +1.1 1,090,818 - AO353_04935 0.70 +3.1 1,090,818 - AO353_04935 0.70 +2.1 1,090,818 - AO353_04935 0.70 +3.3 1,090,818 - AO353_04935 0.70 +0.9 1,090,818 - AO353_04935 0.70 +1.3 1,090,893 + AO353_04935 0.86 +1.7 1,090,894 - AO353_04935 0.86 +0.1 1,090,894 - AO353_04935 0.86 +2.1 1,090,914 + -2.2 1,090,914 + +0.1 1,090,914 + -0.2 1,090,915 - -0.9 1,090,915 - +1.7 1,090,915 - +2.9 1,090,959 - -0.2 1,090,959 - +0.5 1,090,959 - +0.1 1,090,968 + -0.5 1,090,968 + +0.9 1,090,969 - +0.8 1,090,969 - +0.4 1,090,969 - +1.7 1,090,969 - +1.5 1,090,972 + -2.2 1,090,972 + +0.7 1,090,972 + -1.5 1,090,972 + -0.2 1,090,973 - +1.4 1,090,973 - +0.5 1,090,973 - +0.1 1,090,973 - +1.7 1,090,992 + +0.1 1,090,992 + -0.9 1,090,992 + -0.9 1,090,992 + -0.1 1,090,993 - -1.5 1,090,996 + +1.4 1,090,996 + +0.1 1,090,997 - +1.5 1,091,146 - AO353_04940 0.22 +1.4 1,091,279 + AO353_04940 0.44 -0.5 1,091,279 + AO353_04940 0.44 -1.2 1,091,279 + AO353_04940 0.44 -0.6 1,091,279 + AO353_04940 0.44 +1.1 1,091,279 + AO353_04940 0.44 +0.8 1,091,279 + AO353_04940 0.44 +1.1 1,091,279 + AO353_04940 0.44 +1.7 1,091,280 - AO353_04940 0.44 +0.1 1,091,280 - AO353_04940 0.44 +1.4 1,091,280 - AO353_04940 0.44 -0.7 1,091,280 - AO353_04940 0.44 +0.1 1,091,280 - AO353_04940 0.44 +0.1 1,091,280 - AO353_04940 0.44 +0.1 1,091,280 - AO353_04940 0.44 +0.1 1,091,367 + AO353_04940 0.58 +0.5 1,091,409 + AO353_04940 0.65 +0.1 1,091,410 - AO353_04940 0.65 -0.5 1,091,410 - AO353_04940 0.65 +0.1 1,091,420 - AO353_04940 0.67 +0.4 1,091,420 - AO353_04940 0.67 -0.9 1,091,516 + AO353_04940 0.83 -2.5 1,091,516 + AO353_04940 0.83 -1.5 1,091,516 + AO353_04940 0.83 +2.1 1,091,517 - AO353_04940 0.83 -0.3 1,091,517 - AO353_04940 0.83 -0.1 1,091,517 - AO353_04940 0.83 -0.2 1,091,519 + AO353_04940 0.83 +1.1 1,091,519 + AO353_04940 0.83 +0.7 1,091,519 + AO353_04940 0.83 -0.5 1,091,519 + AO353_04940 0.83 +1.7 1,091,520 - AO353_04940 0.83 -0.3 1,091,525 + AO353_04940 0.84 +0.1 1,091,573 + -1.9 1,091,573 + +0.6 1,091,573 + +0.8 1,091,573 + -0.9 1,091,574 - -0.9 1,091,574 - -0.3 1,091,574 - -0.5 1,091,574 - +0.3 1,091,574 - -1.9 1,091,574 - +0.1 1,091,574 - -0.9 1,091,574 - +0.8 1,091,574 - +1.2 1,091,574 - +0.1 1,091,574 - +0.1 1,091,692 + +0.9 1,091,692 + +2.7 1,091,693 - +0.1 1,091,693 - -0.5 1,091,693 - +0.8 1,091,801 - AO353_04945 0.19 +0.7 1,091,801 - AO353_04945 0.19 +0.1 1,091,812 + AO353_04945 0.20 +1.1 1,091,932 + AO353_04945 0.32 +0.5 1,091,932 + AO353_04945 0.32 +2.1 1,091,933 - AO353_04945 0.32 -0.3 1,091,934 + AO353_04945 0.33 -0.4 1,091,934 + AO353_04945 0.33 -2.2 1,091,934 + AO353_04945 0.33 +0.1 1,091,934 + AO353_04945 0.33 -1.9 1,091,934 + AO353_04945 0.33 -1.5 1,091,934 + AO353_04945 0.33 -0.9 1,091,934 + AO353_04945 0.33 -0.9 1,091,934 + AO353_04945 0.33 +0.4 1,091,934 + AO353_04945 0.33 +0.1 1,091,934 + AO353_04945 0.33 -0.1 1,091,934 + AO353_04945 0.33 -0.1 1,091,934 + AO353_04945 0.33 +1.1 1,091,934 + AO353_04945 0.33 -0.6 1,091,934 + AO353_04945 0.33 +1.1 1,091,934 + AO353_04945 0.33 +2.7 1,091,934 + AO353_04945 0.33 +0.4 1,091,934 + AO353_04945 0.33 +0.1 1,091,934 + AO353_04945 0.33 -1.5 1,091,934 + AO353_04945 0.33 -0.9 1,091,934 + AO353_04945 0.33 +2.9 1,091,934 + AO353_04945 0.33 +1.1 1,091,934 + AO353_04945 0.33 +1.3 1,091,934 + AO353_04945 0.33 +3.1 1,091,934 + AO353_04945 0.33 +0.1 1,091,935 - AO353_04945 0.33 -1.6 1,091,935 - AO353_04945 0.33 -1.9 1,091,935 - AO353_04945 0.33 -0.3 1,091,935 - AO353_04945 0.33 +1.7 1,091,935 - AO353_04945 0.33 +1.1 1,091,935 - AO353_04945 0.33 -0.3 1,091,935 - AO353_04945 0.33 -1.6 1,091,935 - AO353_04945 0.33 -1.5 1,091,935 - AO353_04945 0.33 -0.1 1,091,935 - AO353_04945 0.33 +0.5 1,091,935 - AO353_04945 0.33 +0.6 1,091,935 - AO353_04945 0.33 -0.9 1,091,935 - AO353_04945 0.33 +0.5 1,091,935 - AO353_04945 0.33 +1.3 1,091,935 - AO353_04945 0.33 +0.9 1,091,935 - AO353_04945 0.33 +0.3 1,091,935 - AO353_04945 0.33 +1.7
Or see this region's nucleotide sequence