Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04405 and AO353_04410 are separated by 102 nucleotides AO353_04410 and AO353_04415 are separated by 99 nucleotides AO353_04415 and AO353_04420 are separated by 228 nucleotides
AO353_04405: AO353_04405 - MFS transporter, at 948,768 to 950,084
_04405
AO353_04410: AO353_04410 - phosphoribosylglycinamide formyltransferase, at 950,187 to 951,368
_04410
AO353_04415: AO353_04415 - preQ0 transporter, at 951,468 to 951,935
_04415
AO353_04420: AO353_04420 - Fe-S protein, at 952,164 to 952,379
_04420
Position (kb) 950
951
952 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 949.278 kb on - strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.405 kb on - strand, within AO353_04405 at 949.501 kb on - strand, within AO353_04405 at 949.558 kb on - strand, within AO353_04405 at 949.558 kb on - strand, within AO353_04405 at 949.558 kb on - strand, within AO353_04405 at 949.584 kb on + strand, within AO353_04405 at 949.584 kb on + strand, within AO353_04405 at 949.584 kb on + strand, within AO353_04405 at 949.585 kb on - strand, within AO353_04405 at 949.585 kb on - strand, within AO353_04405 at 949.585 kb on - strand, within AO353_04405 at 949.606 kb on - strand, within AO353_04405 at 949.606 kb on - strand, within AO353_04405 at 949.890 kb on - strand, within AO353_04405 at 949.908 kb on + strand, within AO353_04405 at 949.908 kb on + strand, within AO353_04405 at 949.908 kb on + strand, within AO353_04405 at 949.908 kb on + strand, within AO353_04405 at 949.908 kb on + strand, within AO353_04405 at 949.908 kb on + strand, within AO353_04405 at 949.908 kb on + strand, within AO353_04405 at 949.909 kb on - strand, within AO353_04405 at 949.998 kb on + strand at 949.998 kb on + strand at 949.998 kb on + strand at 949.999 kb on - strand at 949.999 kb on - strand at 949.999 kb on - strand at 950.060 kb on + strand at 950.060 kb on + strand at 950.060 kb on + strand at 950.061 kb on - strand at 950.061 kb on - strand at 950.085 kb on + strand at 950.085 kb on + strand at 950.086 kb on - strand at 950.086 kb on - strand at 950.086 kb on - strand at 950.086 kb on - strand at 950.116 kb on - strand at 950.116 kb on - strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.121 kb on + strand at 950.122 kb on - strand at 950.122 kb on - strand at 950.122 kb on - strand at 950.122 kb on - strand at 950.122 kb on - strand at 950.160 kb on + strand at 950.161 kb on - strand at 950.188 kb on + strand at 950.188 kb on + strand at 950.188 kb on + strand at 950.188 kb on + strand at 950.188 kb on + strand at 950.189 kb on - strand at 950.196 kb on + strand at 950.196 kb on + strand at 950.196 kb on + strand at 950.196 kb on + strand at 950.196 kb on + strand at 950.197 kb on - strand at 950.197 kb on - strand at 950.197 kb on - strand at 950.778 kb on - strand, within AO353_04410 at 950.861 kb on + strand, within AO353_04410 at 950.961 kb on - strand, within AO353_04410 at 950.975 kb on - strand, within AO353_04410 at 951.134 kb on + strand, within AO353_04410 at 951.135 kb on - strand, within AO353_04410 at 951.324 kb on + strand at 951.446 kb on + strand at 951.446 kb on + strand at 951.446 kb on + strand at 951.447 kb on - strand at 951.447 kb on - strand at 951.447 kb on - strand at 951.605 kb on + strand, within AO353_04415 at 951.633 kb on + strand, within AO353_04415 at 951.634 kb on - strand, within AO353_04415 at 951.665 kb on + strand, within AO353_04415 at 951.665 kb on + strand, within AO353_04415 at 951.665 kb on + strand, within AO353_04415 at 951.666 kb on - strand, within AO353_04415 at 951.751 kb on + strand, within AO353_04415 at 951.751 kb on + strand, within AO353_04415 at 951.752 kb on - strand, within AO353_04415 at 951.752 kb on - strand, within AO353_04415 at 951.831 kb on + strand, within AO353_04415 at 951.831 kb on + strand, within AO353_04415 at 951.831 kb on + strand, within AO353_04415 at 951.831 kb on + strand, within AO353_04415 at 951.831 kb on + strand, within AO353_04415 at 951.832 kb on - strand, within AO353_04415 at 951.832 kb on - strand, within AO353_04415 at 951.889 kb on + strand at 951.889 kb on + strand at 951.890 kb on - strand at 951.890 kb on - strand at 951.890 kb on - strand at 951.890 kb on - strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.916 kb on + strand at 951.917 kb on - strand at 951.917 kb on - strand at 951.917 kb on - strand at 951.917 kb on - strand at 951.917 kb on - strand at 951.917 kb on - strand at 951.948 kb on + strand at 951.949 kb on - strand at 951.972 kb on + strand at 951.972 kb on + strand at 951.972 kb on + strand at 951.973 kb on - strand at 951.973 kb on - strand at 951.973 kb on - strand at 952.070 kb on - strand at 952.070 kb on - strand at 952.070 kb on - strand at 952.070 kb on - strand at 952.150 kb on + strand at 952.151 kb on - strand at 952.151 kb on - strand at 952.151 kb on - strand at 952.169 kb on + strand at 952.263 kb on - strand, within AO353_04420 at 952.263 kb on - strand, within AO353_04420 at 952.313 kb on + strand, within AO353_04420 at 952.314 kb on - strand, within AO353_04420 at 952.314 kb on - strand, within AO353_04420 at 952.314 kb on - strand, within AO353_04420 at 952.356 kb on + strand, within AO353_04420 at 952.357 kb on - strand, within AO353_04420 at 952.357 kb on - strand, within AO353_04420
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 949,278 - AO353_04405 0.39 +0.3 949,404 + AO353_04405 0.48 +0.1 949,404 + AO353_04405 0.48 +0.6 949,404 + AO353_04405 0.48 -1.0 949,404 + AO353_04405 0.48 -0.5 949,405 - AO353_04405 0.48 -1.4 949,501 - AO353_04405 0.56 +0.8 949,558 - AO353_04405 0.60 +0.3 949,558 - AO353_04405 0.60 +1.1 949,558 - AO353_04405 0.60 -1.5 949,584 + AO353_04405 0.62 -0.1 949,584 + AO353_04405 0.62 +0.1 949,584 + AO353_04405 0.62 +1.6 949,585 - AO353_04405 0.62 -1.9 949,585 - AO353_04405 0.62 +0.6 949,585 - AO353_04405 0.62 +0.2 949,606 - AO353_04405 0.64 -0.4 949,606 - AO353_04405 0.64 -1.9 949,890 - AO353_04405 0.85 +1.5 949,908 + AO353_04405 0.87 +0.1 949,908 + AO353_04405 0.87 +1.1 949,908 + AO353_04405 0.87 +0.4 949,908 + AO353_04405 0.87 +1.1 949,908 + AO353_04405 0.87 -1.5 949,908 + AO353_04405 0.87 +1.1 949,908 + AO353_04405 0.87 +1.6 949,909 - AO353_04405 0.87 +0.1 949,998 + +1.1 949,998 + +0.5 949,998 + +2.5 949,999 - +0.5 949,999 - -0.2 949,999 - -0.8 950,060 + +0.1 950,060 + -0.5 950,060 + +1.1 950,061 - +0.4 950,061 - -0.9 950,085 + -0.4 950,085 + +2.1 950,086 - +1.6 950,086 - +0.1 950,086 - +1.6 950,086 - +0.9 950,116 - -0.2 950,116 - +0.8 950,121 + -0.9 950,121 + -0.4 950,121 + +0.6 950,121 + +0.5 950,121 + +0.4 950,121 + +2.4 950,121 + +2.3 950,121 + -0.9 950,121 + -0.5 950,121 + +0.1 950,121 + +1.1 950,121 + -1.3 950,122 - -1.3 950,122 - +0.1 950,122 - +2.1 950,122 - -0.5 950,122 - +0.5 950,160 + -0.7 950,161 - +1.1 950,188 + -0.5 950,188 + -0.4 950,188 + +0.4 950,188 + +1.1 950,188 + +0.1 950,189 - -0.4 950,196 + +2.4 950,196 + +0.1 950,196 + -1.9 950,196 + +0.8 950,196 + +0.1 950,197 - -1.2 950,197 - +0.7 950,197 - +1.4 950,778 - AO353_04410 0.50 +1.1 950,861 + AO353_04410 0.57 +0.6 950,961 - AO353_04410 0.65 +1.1 950,975 - AO353_04410 0.67 +0.1 951,134 + AO353_04410 0.80 +0.1 951,135 - AO353_04410 0.80 +1.1 951,324 + +1.1 951,446 + +0.1 951,446 + -0.9 951,446 + +2.4 951,447 - +0.6 951,447 - +0.5 951,447 - +0.1 951,605 + AO353_04415 0.29 +2.4 951,633 + AO353_04415 0.35 +0.5 951,634 - AO353_04415 0.35 +0.6 951,665 + AO353_04415 0.42 +1.5 951,665 + AO353_04415 0.42 +1.1 951,665 + AO353_04415 0.42 -1.3 951,666 - AO353_04415 0.42 -0.7 951,751 + AO353_04415 0.60 -0.9 951,751 + AO353_04415 0.60 -1.0 951,752 - AO353_04415 0.61 +2.9 951,752 - AO353_04415 0.61 -0.4 951,831 + AO353_04415 0.78 -1.9 951,831 + AO353_04415 0.78 +0.4 951,831 + AO353_04415 0.78 -1.5 951,831 + AO353_04415 0.78 +0.4 951,831 + AO353_04415 0.78 +0.6 951,832 - AO353_04415 0.78 -1.9 951,832 - AO353_04415 0.78 +0.1 951,889 + -1.9 951,889 + +1.5 951,890 - -2.8 951,890 - +1.1 951,890 - +0.1 951,890 - -0.1 951,916 + -2.3 951,916 + -0.4 951,916 + +0.1 951,916 + -0.3 951,916 + +0.1 951,916 + +0.6 951,916 + +0.4 951,916 + +1.3 951,916 + +0.5 951,916 + -0.3 951,917 - +0.1 951,917 - +2.6 951,917 - -1.5 951,917 - +1.1 951,917 - +2.2 951,917 - -0.5 951,948 + +1.4 951,949 - -0.9 951,972 + +1.2 951,972 + +0.1 951,972 + +1.1 951,973 - -1.5 951,973 - -0.4 951,973 - +0.8 952,070 - +0.1 952,070 - -0.4 952,070 - -0.1 952,070 - +1.5 952,150 + +0.9 952,151 - +0.6 952,151 - +0.2 952,151 - +1.4 952,169 + -0.3 952,263 - AO353_04420 0.46 +0.8 952,263 - AO353_04420 0.46 +1.1 952,313 + AO353_04420 0.69 +0.1 952,314 - AO353_04420 0.69 +1.6 952,314 - AO353_04420 0.69 -0.7 952,314 - AO353_04420 0.69 -0.5 952,356 + AO353_04420 0.89 +0.8 952,357 - AO353_04420 0.89 +0.4 952,357 - AO353_04420 0.89 +0.3
Or see this region's nucleotide sequence