Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03015

Experiment: Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03010 and AO353_03015 overlap by 1 nucleotidesAO353_03015 and AO353_03020 are separated by 68 nucleotides AO353_03010: AO353_03010 - succinylglutamate-semialdehyde dehydrogenase, at 638,058 to 639,521 _03010 AO353_03015: AO353_03015 - arginine N-succinyltransferase, at 639,521 to 640,546 _03015 AO353_03020: AO353_03020 - arginine N-succinyltransferase, at 640,615 to 641,634 _03020 Position (kb) 639 640 641Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 638.723 kb on + strand, within AO353_03010at 638.724 kb on - strand, within AO353_03010at 638.731 kb on + strand, within AO353_03010at 638.732 kb on - strand, within AO353_03010at 638.732 kb on - strand, within AO353_03010at 638.732 kb on - strand, within AO353_03010at 638.928 kb on + strand, within AO353_03010at 638.928 kb on + strand, within AO353_03010at 638.929 kb on - strand, within AO353_03010at 638.929 kb on - strand, within AO353_03010at 638.929 kb on - strand, within AO353_03010at 639.088 kb on + strand, within AO353_03010at 639.088 kb on + strand, within AO353_03010at 639.088 kb on + strand, within AO353_03010at 639.089 kb on - strand, within AO353_03010at 639.089 kb on - strand, within AO353_03010at 639.089 kb on - strand, within AO353_03010at 639.200 kb on + strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.509 kb on - strandat 639.509 kb on - strandat 639.522 kb on + strandat 639.522 kb on + strandat 639.523 kb on - strandat 639.523 kb on - strandat 639.523 kb on - strandat 639.560 kb on + strandat 639.560 kb on + strandat 639.560 kb on + strandat 639.560 kb on + strandat 639.561 kb on - strandat 639.561 kb on - strandat 639.561 kb on - strandat 639.807 kb on + strand, within AO353_03015at 639.808 kb on - strand, within AO353_03015at 639.915 kb on + strand, within AO353_03015at 639.915 kb on + strand, within AO353_03015at 639.915 kb on + strand, within AO353_03015at 639.916 kb on - strand, within AO353_03015at 639.916 kb on - strand, within AO353_03015at 640.243 kb on - strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.378 kb on - strand, within AO353_03015at 640.378 kb on - strand, within AO353_03015at 640.549 kb on + strandat 640.549 kb on + strandat 640.549 kb on + strandat 640.549 kb on + strandat 640.549 kb on + strandat 640.549 kb on + strandat 640.549 kb on + strandat 640.549 kb on + strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.550 kb on - strandat 640.597 kb on + strandat 640.598 kb on - strandat 640.598 kb on - strandat 640.617 kb on - strandat 640.617 kb on - strandat 640.706 kb on + strandat 640.707 kb on - strandat 640.724 kb on - strand, within AO353_03020at 640.763 kb on + strand, within AO353_03020at 640.764 kb on - strand, within AO353_03020at 640.764 kb on - strand, within AO353_03020at 640.886 kb on + strand, within AO353_03020at 640.886 kb on + strand, within AO353_03020at 640.886 kb on + strand, within AO353_03020at 640.887 kb on - strand, within AO353_03020at 640.887 kb on - strand, within AO353_03020at 640.887 kb on - strand, within AO353_03020at 640.994 kb on + strand, within AO353_03020at 640.995 kb on - strand, within AO353_03020at 640.995 kb on - strand, within AO353_03020at 640.995 kb on - strand, within AO353_03020at 640.995 kb on - strand, within AO353_03020at 641.069 kb on + strand, within AO353_03020at 641.069 kb on + strand, within AO353_03020at 641.069 kb on + strand, within AO353_03020at 641.069 kb on + strand, within AO353_03020at 641.070 kb on - strand, within AO353_03020at 641.070 kb on - strand, within AO353_03020at 641.070 kb on - strand, within AO353_03020at 641.070 kb on - strand, within AO353_03020at 641.070 kb on - strand, within AO353_03020at 641.255 kb on + strand, within AO353_03020at 641.255 kb on + strand, within AO353_03020at 641.255 kb on + strand, within AO353_03020at 641.255 kb on + strand, within AO353_03020at 641.256 kb on - strand, within AO353_03020at 641.256 kb on - strand, within AO353_03020at 641.256 kb on - strand, within AO353_03020at 641.256 kb on - strand, within AO353_03020at 641.269 kb on + strand, within AO353_03020at 641.269 kb on + strand, within AO353_03020at 641.269 kb on + strand, within AO353_03020at 641.270 kb on - strand, within AO353_03020at 641.319 kb on + strand, within AO353_03020at 641.319 kb on + strand, within AO353_03020at 641.319 kb on + strand, within AO353_03020at 641.319 kb on + strand, within AO353_03020at 641.373 kb on - strand, within AO353_03020at 641.373 kb on - strand, within AO353_03020at 641.373 kb on - strand, within AO353_03020at 641.373 kb on - strand, within AO353_03020at 641.459 kb on + strand, within AO353_03020at 641.460 kb on - strand, within AO353_03020at 641.460 kb on - strand, within AO353_03020

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml
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638,723 + AO353_03010 0.45 +0.4
638,724 - AO353_03010 0.45 +0.6
638,731 + AO353_03010 0.46 +0.7
638,732 - AO353_03010 0.46 +2.7
638,732 - AO353_03010 0.46 +0.3
638,732 - AO353_03010 0.46 +1.8
638,928 + AO353_03010 0.59 +0.7
638,928 + AO353_03010 0.59 +0.9
638,929 - AO353_03010 0.59 +1.7
638,929 - AO353_03010 0.59 +3.2
638,929 - AO353_03010 0.59 +1.6
639,088 + AO353_03010 0.70 +1.8
639,088 + AO353_03010 0.70 +0.2
639,088 + AO353_03010 0.70 +2.5
639,089 - AO353_03010 0.70 +1.6
639,089 - AO353_03010 0.70 +2.3
639,089 - AO353_03010 0.70 +2.3
639,200 + AO353_03010 0.78 +2.8
639,201 - AO353_03010 0.78 +0.3
639,201 - AO353_03010 0.78 +0.3
639,201 - AO353_03010 0.78 +0.0
639,201 - AO353_03010 0.78 +1.6
639,201 - AO353_03010 0.78 +1.6
639,508 + +1.7
639,508 + +2.5
639,508 + +2.0
639,508 + +3.3
639,508 + +2.1
639,508 + +0.0
639,508 + +0.0
639,508 + +3.0
639,508 + +1.0
639,508 + +0.0
639,509 - +1.7
639,509 - +2.2
639,522 + +0.0
639,522 + -1.6
639,523 - +1.8
639,523 - +3.1
639,523 - +1.9
639,560 + +3.2
639,560 + +3.3
639,560 + +3.0
639,560 + +3.1
639,561 - +5.4
639,561 - +2.0
639,561 - +4.5
639,807 + AO353_03015 0.28 +5.1
639,808 - AO353_03015 0.28 +2.9
639,915 + AO353_03015 0.38 +4.7
639,915 + AO353_03015 0.38 +3.1
639,915 + AO353_03015 0.38 +2.7
639,916 - AO353_03015 0.38 +2.6
639,916 - AO353_03015 0.38 +2.8
640,243 - AO353_03015 0.70 +3.0
640,377 + AO353_03015 0.83 +4.0
640,377 + AO353_03015 0.83 +4.4
640,377 + AO353_03015 0.83 +4.3
640,377 + AO353_03015 0.83 +4.2
640,377 + AO353_03015 0.83 +3.5
640,378 - AO353_03015 0.84 +3.5
640,378 - AO353_03015 0.84 +1.0
640,549 + +4.1
640,549 + +5.4
640,549 + +5.2
640,549 + +4.1
640,549 + +4.4
640,549 + +6.8
640,549 + +3.9
640,549 + +3.6
640,550 - +4.6
640,550 - +1.3
640,550 - +4.9
640,550 - +4.0
640,550 - +5.1
640,550 - +2.6
640,550 - +3.8
640,550 - +4.0
640,550 - +4.3
640,550 - +2.3
640,550 - +4.8
640,597 + -1.0
640,598 - +2.0
640,598 - -2.0
640,617 - +0.8
640,617 - +0.0
640,706 + -0.6
640,707 - -0.4
640,724 - AO353_03020 0.11 +0.2
640,763 + AO353_03020 0.15 +3.9
640,764 - AO353_03020 0.15 -2.0
640,764 - AO353_03020 0.15 -0.6
640,886 + AO353_03020 0.27 +1.4
640,886 + AO353_03020 0.27 +4.5
640,886 + AO353_03020 0.27 +4.9
640,887 - AO353_03020 0.27 +0.0
640,887 - AO353_03020 0.27 +1.0
640,887 - AO353_03020 0.27 -0.3
640,994 + AO353_03020 0.37 +2.1
640,995 - AO353_03020 0.37 +1.4
640,995 - AO353_03020 0.37 +1.0
640,995 - AO353_03020 0.37 +0.0
640,995 - AO353_03020 0.37 +0.0
641,069 + AO353_03020 0.45 +5.8
641,069 + AO353_03020 0.45 +2.7
641,069 + AO353_03020 0.45 +5.4
641,069 + AO353_03020 0.45 +5.2
641,070 - AO353_03020 0.45 -1.0
641,070 - AO353_03020 0.45 +1.2
641,070 - AO353_03020 0.45 +2.8
641,070 - AO353_03020 0.45 +0.3
641,070 - AO353_03020 0.45 +1.8
641,255 + AO353_03020 0.63 +2.9
641,255 + AO353_03020 0.63 +1.3
641,255 + AO353_03020 0.63 +5.1
641,255 + AO353_03020 0.63 +5.3
641,256 - AO353_03020 0.63 +3.6
641,256 - AO353_03020 0.63 +1.6
641,256 - AO353_03020 0.63 +0.3
641,256 - AO353_03020 0.63 +1.6
641,269 + AO353_03020 0.64 +5.8
641,269 + AO353_03020 0.64 +3.1
641,269 + AO353_03020 0.64 +4.4
641,270 - AO353_03020 0.64 +2.0
641,319 + AO353_03020 0.69 +3.9
641,319 + AO353_03020 0.69 +2.5
641,319 + AO353_03020 0.69 +4.1
641,319 + AO353_03020 0.69 +6.2
641,373 - AO353_03020 0.74 +1.7
641,373 - AO353_03020 0.74 +3.9
641,373 - AO353_03020 0.74 +3.9
641,373 - AO353_03020 0.74 +3.0
641,459 + AO353_03020 0.83 +3.7
641,460 - AO353_03020 0.83 +0.8
641,460 - AO353_03020 0.83 +1.7

Or see this region's nucleotide sequence