Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01900 and AO353_01905 are separated by 132 nucleotides AO353_01905 and AO353_01910 are separated by 72 nucleotides
AO353_01900: AO353_01900 - hypothetical protein, at 401,498 to 402,412
_01900
AO353_01905: AO353_01905 - TetR family transcriptional regulator, at 402,545 to 403,150
_01905
AO353_01910: AO353_01910 - hypothetical protein, at 403,223 to 404,290
_01910
Position (kb) 402
403
404 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 401.566 kb on + strand at 401.567 kb on - strand at 401.567 kb on - strand at 401.603 kb on - strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.736 kb on + strand, within AO353_01900 at 401.737 kb on - strand, within AO353_01900 at 401.737 kb on - strand, within AO353_01900 at 401.737 kb on - strand, within AO353_01900 at 401.737 kb on - strand, within AO353_01900 at 401.737 kb on - strand, within AO353_01900 at 401.737 kb on - strand, within AO353_01900 at 401.737 kb on - strand, within AO353_01900 at 401.847 kb on + strand, within AO353_01900 at 401.847 kb on + strand, within AO353_01900 at 401.959 kb on + strand, within AO353_01900 at 401.960 kb on - strand, within AO353_01900 at 401.960 kb on - strand, within AO353_01900 at 402.000 kb on + strand, within AO353_01900 at 402.000 kb on + strand, within AO353_01900 at 402.000 kb on + strand, within AO353_01900 at 402.001 kb on - strand, within AO353_01900 at 402.001 kb on - strand, within AO353_01900 at 402.123 kb on + strand, within AO353_01900 at 402.123 kb on + strand, within AO353_01900 at 402.123 kb on + strand, within AO353_01900 at 402.123 kb on + strand, within AO353_01900 at 402.124 kb on - strand, within AO353_01900 at 402.124 kb on - strand at 402.124 kb on - strand, within AO353_01900 at 402.124 kb on - strand, within AO353_01900 at 402.366 kb on - strand at 402.430 kb on + strand at 402.430 kb on + strand at 402.430 kb on + strand at 402.430 kb on + strand at 402.430 kb on + strand at 402.431 kb on - strand at 402.431 kb on - strand at 402.431 kb on - strand at 402.431 kb on - strand at 402.431 kb on - strand at 402.431 kb on - strand at 402.431 kb on - strand at 402.432 kb on + strand at 402.432 kb on + strand at 402.432 kb on + strand at 402.433 kb on - strand at 402.433 kb on - strand at 402.433 kb on - strand at 402.433 kb on - strand at 402.433 kb on - strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.434 kb on + strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.435 kb on - strand at 402.451 kb on - strand at 402.451 kb on - strand at 402.502 kb on + strand at 402.503 kb on - strand at 402.545 kb on - strand at 402.568 kb on + strand at 402.568 kb on + strand at 402.677 kb on + strand, within AO353_01905 at 402.677 kb on + strand, within AO353_01905 at 402.677 kb on + strand, within AO353_01905 at 402.678 kb on - strand, within AO353_01905 at 402.678 kb on - strand, within AO353_01905 at 402.678 kb on - strand, within AO353_01905 at 402.678 kb on - strand, within AO353_01905 at 402.678 kb on - strand, within AO353_01905 at 402.680 kb on + strand, within AO353_01905 at 402.680 kb on + strand, within AO353_01905 at 402.680 kb on + strand, within AO353_01905 at 402.681 kb on - strand, within AO353_01905 at 402.681 kb on - strand, within AO353_01905 at 402.681 kb on - strand, within AO353_01905 at 402.683 kb on + strand, within AO353_01905 at 402.683 kb on + strand, within AO353_01905 at 402.683 kb on + strand, within AO353_01905 at 402.683 kb on + strand, within AO353_01905 at 402.683 kb on + strand, within AO353_01905 at 402.684 kb on - strand, within AO353_01905 at 402.684 kb on - strand, within AO353_01905 at 402.684 kb on - strand, within AO353_01905 at 402.684 kb on - strand, within AO353_01905 at 402.801 kb on - strand, within AO353_01905 at 402.801 kb on - strand, within AO353_01905 at 403.028 kb on + strand, within AO353_01905 at 403.028 kb on + strand, within AO353_01905 at 403.029 kb on - strand, within AO353_01905 at 403.029 kb on - strand, within AO353_01905 at 403.029 kb on - strand, within AO353_01905 at 403.091 kb on + strand at 403.092 kb on - strand at 403.152 kb on + strand at 403.152 kb on + strand at 403.152 kb on + strand at 403.152 kb on + strand at 403.153 kb on - strand at 403.262 kb on + strand at 403.262 kb on + strand at 403.337 kb on - strand, within AO353_01910 at 403.401 kb on - strand, within AO353_01910 at 403.401 kb on - strand, within AO353_01910 at 403.401 kb on - strand, within AO353_01910 at 403.404 kb on + strand, within AO353_01910 at 403.404 kb on + strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.436 kb on - strand, within AO353_01910 at 403.482 kb on + strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.548 kb on + strand, within AO353_01910 at 403.548 kb on + strand, within AO353_01910 at 403.604 kb on + strand, within AO353_01910 at 403.605 kb on - strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.615 kb on - strand, within AO353_01910 at 403.722 kb on + strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.767 kb on - strand, within AO353_01910 at 403.767 kb on - strand, within AO353_01910 at 403.801 kb on + strand, within AO353_01910 at 403.801 kb on + strand, within AO353_01910 at 403.801 kb on + strand, within AO353_01910 at 404.021 kb on + strand, within AO353_01910 at 404.021 kb on + strand, within AO353_01910 at 404.021 kb on + strand, within AO353_01910 at 404.022 kb on - strand, within AO353_01910 at 404.037 kb on + strand, within AO353_01910 at 404.048 kb on + strand, within AO353_01910 at 404.049 kb on - strand, within AO353_01910 at 404.049 kb on - strand, within AO353_01910 at 404.138 kb on + strand, within AO353_01910 at 404.138 kb on + strand, within AO353_01910 at 404.139 kb on - strand, within AO353_01910
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 401,566 + +0.5 401,567 - -0.1 401,567 - +1.4 401,603 - AO353_01900 0.11 +0.4 401,736 + AO353_01900 0.26 -0.6 401,736 + AO353_01900 0.26 -0.7 401,736 + AO353_01900 0.26 -1.6 401,736 + AO353_01900 0.26 -1.1 401,736 + AO353_01900 0.26 -0.1 401,736 + AO353_01900 0.26 -0.3 401,736 + AO353_01900 0.26 +0.4 401,736 + AO353_01900 0.26 +0.2 401,736 + AO353_01900 0.26 +0.7 401,737 - AO353_01900 0.26 +0.4 401,737 - AO353_01900 0.26 +0.9 401,737 - AO353_01900 0.26 -0.1 401,737 - AO353_01900 0.26 +0.9 401,737 - AO353_01900 0.26 +0.9 401,737 - AO353_01900 0.26 +0.7 401,737 - AO353_01900 0.26 +0.2 401,847 + AO353_01900 0.38 +0.4 401,847 + AO353_01900 0.38 +0.5 401,959 + AO353_01900 0.50 +1.8 401,960 - AO353_01900 0.50 -1.6 401,960 - AO353_01900 0.50 -0.1 402,000 + AO353_01900 0.55 +1.2 402,000 + AO353_01900 0.55 -0.8 402,000 + AO353_01900 0.55 +0.7 402,001 - AO353_01900 0.55 -0.4 402,001 - AO353_01900 0.55 -0.1 402,123 + AO353_01900 0.68 +1.9 402,123 + AO353_01900 0.68 +2.8 402,123 + AO353_01900 0.68 +1.2 402,123 + AO353_01900 0.68 +0.8 402,124 - AO353_01900 0.68 -1.1 402,124 - -1.1 402,124 - AO353_01900 0.68 -0.1 402,124 - AO353_01900 0.68 -2.1 402,366 - -1.1 402,430 + +1.5 402,430 + -1.6 402,430 + -2.1 402,430 + -0.1 402,430 + +0.4 402,431 - +0.7 402,431 - -1.1 402,431 - +0.7 402,431 - +1.2 402,431 - -0.8 402,431 - -0.1 402,431 - -0.4 402,432 + -0.1 402,432 + -0.3 402,432 + +0.4 402,433 - +0.7 402,433 - +0.9 402,433 - -0.8 402,433 - +1.5 402,433 - +0.3 402,434 + -0.6 402,434 + +1.9 402,434 + +0.9 402,434 + +1.6 402,434 + -0.1 402,434 + +0.3 402,434 + -1.1 402,434 + +0.2 402,434 + -1.6 402,434 + -0.1 402,434 + +0.9 402,434 + +0.8 402,434 + -1.6 402,434 + -0.1 402,434 + +0.5 402,434 + -0.1 402,435 - +1.4 402,435 - -1.1 402,435 - +0.9 402,435 - +0.9 402,435 - -2.1 402,435 - -0.1 402,435 - -0.8 402,435 - -0.1 402,435 - -2.1 402,435 - +0.5 402,435 - -0.1 402,435 - -0.1 402,435 - +0.3 402,435 - +0.9 402,435 - -0.1 402,435 - +1.5 402,435 - +0.5 402,435 - +1.2 402,435 - -0.6 402,451 - -0.4 402,451 - +0.5 402,502 + -0.2 402,503 - -0.1 402,545 - +0.4 402,568 + +0.9 402,568 + -0.1 402,677 + AO353_01905 0.22 -2.1 402,677 + AO353_01905 0.22 +0.4 402,677 + AO353_01905 0.22 +1.5 402,678 - AO353_01905 0.22 +0.3 402,678 - AO353_01905 0.22 +0.9 402,678 - AO353_01905 0.22 +1.3 402,678 - AO353_01905 0.22 -0.5 402,678 - AO353_01905 0.22 +1.0 402,680 + AO353_01905 0.22 +1.5 402,680 + AO353_01905 0.22 -0.4 402,680 + AO353_01905 0.22 +0.9 402,681 - AO353_01905 0.22 -0.6 402,681 - AO353_01905 0.22 +0.9 402,681 - AO353_01905 0.22 +0.7 402,683 + AO353_01905 0.23 -1.1 402,683 + AO353_01905 0.23 +1.5 402,683 + AO353_01905 0.23 -0.1 402,683 + AO353_01905 0.23 +0.9 402,683 + AO353_01905 0.23 +0.7 402,684 - AO353_01905 0.23 -0.6 402,684 - AO353_01905 0.23 +0.9 402,684 - AO353_01905 0.23 +1.9 402,684 - AO353_01905 0.23 +0.9 402,801 - AO353_01905 0.42 -0.1 402,801 - AO353_01905 0.42 -0.6 403,028 + AO353_01905 0.80 +1.5 403,028 + AO353_01905 0.80 +1.3 403,029 - AO353_01905 0.80 -0.1 403,029 - AO353_01905 0.80 +1.1 403,029 - AO353_01905 0.80 -0.5 403,091 + +1.5 403,092 - -1.1 403,152 + -1.6 403,152 + +1.3 403,152 + +0.9 403,152 + +0.9 403,153 - -0.1 403,262 + +0.9 403,262 + +0.4 403,337 - AO353_01910 0.11 -0.1 403,401 - AO353_01910 0.17 -1.6 403,401 - AO353_01910 0.17 -0.1 403,401 - AO353_01910 0.17 +1.3 403,404 + AO353_01910 0.17 +0.2 403,404 + AO353_01910 0.17 -1.1 403,405 - AO353_01910 0.17 -1.6 403,405 - AO353_01910 0.17 -0.6 403,405 - AO353_01910 0.17 +0.4 403,405 - AO353_01910 0.17 +1.9 403,436 - AO353_01910 0.20 +1.9 403,482 + AO353_01910 0.24 +0.5 403,483 - AO353_01910 0.24 -0.1 403,483 - AO353_01910 0.24 -0.6 403,483 - AO353_01910 0.24 +0.7 403,483 - AO353_01910 0.24 -2.4 403,483 - AO353_01910 0.24 -0.1 403,548 + AO353_01910 0.30 -1.6 403,548 + AO353_01910 0.30 +0.5 403,604 + AO353_01910 0.36 -0.1 403,605 - AO353_01910 0.36 -1.4 403,612 + AO353_01910 0.36 +1.4 403,612 + AO353_01910 0.36 +0.6 403,612 + AO353_01910 0.36 +1.4 403,612 + AO353_01910 0.36 -0.3 403,612 + AO353_01910 0.36 +1.9 403,612 + AO353_01910 0.36 -1.1 403,612 + AO353_01910 0.36 -0.6 403,613 - AO353_01910 0.37 +0.6 403,613 - AO353_01910 0.37 +0.9 403,613 - AO353_01910 0.37 +2.3 403,613 - AO353_01910 0.37 +0.2 403,613 - AO353_01910 0.37 +0.7 403,613 - AO353_01910 0.37 -0.6 403,613 - AO353_01910 0.37 +2.5 403,613 - AO353_01910 0.37 +0.5 403,613 - AO353_01910 0.37 +1.3 403,613 - AO353_01910 0.37 +0.3 403,613 - AO353_01910 0.37 +1.0 403,613 - AO353_01910 0.37 -0.6 403,615 - AO353_01910 0.37 +1.2 403,722 + AO353_01910 0.47 +0.9 403,723 - AO353_01910 0.47 +0.5 403,723 - AO353_01910 0.47 -1.1 403,723 - AO353_01910 0.47 -0.1 403,723 - AO353_01910 0.47 +0.9 403,723 - AO353_01910 0.47 -1.1 403,723 - AO353_01910 0.47 -1.2 403,767 - AO353_01910 0.51 -0.6 403,767 - AO353_01910 0.51 -0.1 403,801 + AO353_01910 0.54 -0.1 403,801 + AO353_01910 0.54 +0.4 403,801 + AO353_01910 0.54 +0.5 404,021 + AO353_01910 0.75 +0.4 404,021 + AO353_01910 0.75 -0.6 404,021 + AO353_01910 0.75 -0.3 404,022 - AO353_01910 0.75 +1.3 404,037 + AO353_01910 0.76 +0.5 404,048 + AO353_01910 0.77 +0.4 404,049 - AO353_01910 0.77 -0.1 404,049 - AO353_01910 0.77 -1.1 404,138 + AO353_01910 0.86 +0.9 404,138 + AO353_01910 0.86 -1.1 404,139 - AO353_01910 0.86 +0.5
Or see this region's nucleotide sequence