Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01530 and AO353_01535 overlap by 4 nucleotides AO353_01535 and AO353_01540 are separated by 57 nucleotides AO353_01540 and AO353_01545 are separated by 975 nucleotides
AO353_01530: AO353_01530 - amino acid ABC transporter permease, at 326,943 to 327,653
_01530
AO353_01535: AO353_01535 - amino acid ABC transporter permease, at 327,650 to 328,378
_01535
AO353_01540: AO353_01540 - ABC transporter substrate-binding protein, at 328,436 to 329,215
_01540
AO353_01545: AO353_01545 - secretin, at 330,191 to 331,432
_01545
Position (kb) 328
329
330 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 327.439 kb on + strand, within AO353_01530 at 327.439 kb on + strand, within AO353_01530 at 327.439 kb on + strand, within AO353_01530 at 327.439 kb on + strand, within AO353_01530 at 327.439 kb on + strand, within AO353_01530 at 327.439 kb on + strand, within AO353_01530 at 327.439 kb on + strand, within AO353_01530 at 327.439 kb on + strand, within AO353_01530 at 327.463 kb on + strand, within AO353_01530 at 327.463 kb on + strand, within AO353_01530 at 327.463 kb on + strand, within AO353_01530 at 327.463 kb on + strand, within AO353_01530 at 327.463 kb on + strand, within AO353_01530 at 327.463 kb on + strand, within AO353_01530 at 327.469 kb on + strand, within AO353_01530 at 327.469 kb on + strand, within AO353_01530 at 327.489 kb on + strand, within AO353_01530 at 327.489 kb on + strand, within AO353_01530 at 327.489 kb on + strand, within AO353_01530 at 327.490 kb on - strand, within AO353_01530 at 327.490 kb on - strand, within AO353_01530 at 327.490 kb on - strand, within AO353_01530 at 327.490 kb on - strand, within AO353_01530 at 327.490 kb on - strand, within AO353_01530 at 327.490 kb on - strand, within AO353_01530 at 327.493 kb on + strand, within AO353_01530 at 327.493 kb on + strand, within AO353_01530 at 327.493 kb on + strand, within AO353_01530 at 327.493 kb on + strand, within AO353_01530 at 327.493 kb on + strand, within AO353_01530 at 327.494 kb on - strand, within AO353_01530 at 327.494 kb on - strand, within AO353_01530 at 327.611 kb on + strand at 327.611 kb on + strand at 327.612 kb on - strand at 327.613 kb on + strand at 327.613 kb on + strand at 327.614 kb on - strand at 327.614 kb on - strand at 327.614 kb on - strand at 327.614 kb on - strand at 327.614 kb on - strand at 327.631 kb on + strand at 327.643 kb on - strand at 327.643 kb on - strand at 327.656 kb on + strand at 327.656 kb on + strand at 327.656 kb on + strand at 327.656 kb on + strand at 327.656 kb on + strand at 327.657 kb on - strand at 327.657 kb on - strand at 327.657 kb on - strand at 327.681 kb on + strand at 327.682 kb on - strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.708 kb on + strand at 327.709 kb on - strand at 327.709 kb on - strand at 327.709 kb on - strand at 327.709 kb on - strand at 327.709 kb on - strand at 327.709 kb on - strand at 327.709 kb on - strand at 327.735 kb on + strand, within AO353_01535 at 327.735 kb on + strand, within AO353_01535 at 327.735 kb on + strand, within AO353_01535 at 327.735 kb on + strand, within AO353_01535 at 327.736 kb on - strand, within AO353_01535 at 327.736 kb on - strand, within AO353_01535 at 327.736 kb on - strand, within AO353_01535 at 327.736 kb on - strand, within AO353_01535 at 327.736 kb on - strand, within AO353_01535 at 327.736 kb on - strand, within AO353_01535 at 327.774 kb on + strand, within AO353_01535 at 327.775 kb on - strand, within AO353_01535 at 327.784 kb on + strand, within AO353_01535 at 327.869 kb on - strand, within AO353_01535 at 327.948 kb on + strand, within AO353_01535 at 328.017 kb on + strand, within AO353_01535 at 328.017 kb on + strand, within AO353_01535 at 328.018 kb on - strand, within AO353_01535 at 328.018 kb on - strand, within AO353_01535 at 328.018 kb on - strand, within AO353_01535 at 328.018 kb on - strand, within AO353_01535 at 328.026 kb on + strand, within AO353_01535 at 328.026 kb on + strand, within AO353_01535 at 328.026 kb on + strand, within AO353_01535 at 328.077 kb on + strand, within AO353_01535 at 328.077 kb on + strand, within AO353_01535 at 328.077 kb on + strand, within AO353_01535 at 328.077 kb on + strand, within AO353_01535 at 328.077 kb on + strand, within AO353_01535 at 328.077 kb on + strand, within AO353_01535 at 328.078 kb on - strand, within AO353_01535 at 328.078 kb on - strand, within AO353_01535 at 328.078 kb on - strand, within AO353_01535 at 328.182 kb on + strand, within AO353_01535 at 328.182 kb on + strand, within AO353_01535 at 328.182 kb on + strand, within AO353_01535 at 328.183 kb on - strand, within AO353_01535 at 328.183 kb on - strand, within AO353_01535 at 328.274 kb on + strand, within AO353_01535 at 328.275 kb on - strand, within AO353_01535 at 328.280 kb on + strand, within AO353_01535 at 328.378 kb on + strand at 328.378 kb on + strand at 328.378 kb on + strand at 328.378 kb on + strand at 328.378 kb on + strand at 328.378 kb on + strand at 328.378 kb on + strand at 328.378 kb on + strand at 328.378 kb on + strand at 328.379 kb on - strand at 328.392 kb on - strand at 328.392 kb on - strand at 328.392 kb on - strand at 328.392 kb on - strand at 328.392 kb on - strand at 328.392 kb on - strand at 328.400 kb on - strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.437 kb on + strand at 328.438 kb on - strand at 328.438 kb on - strand at 328.438 kb on - strand at 328.438 kb on - strand at 328.438 kb on - strand at 328.438 kb on - strand at 328.438 kb on - strand at 328.449 kb on + strand at 328.450 kb on - strand at 328.450 kb on - strand at 328.491 kb on + strand at 328.491 kb on + strand at 328.492 kb on - strand at 328.492 kb on - strand at 328.492 kb on - strand at 328.492 kb on - strand at 328.492 kb on - strand at 328.492 kb on - strand at 328.621 kb on - strand, within AO353_01540 at 328.713 kb on + strand, within AO353_01540 at 328.713 kb on + strand, within AO353_01540 at 328.734 kb on + strand, within AO353_01540 at 328.734 kb on + strand, within AO353_01540 at 328.735 kb on - strand, within AO353_01540 at 328.735 kb on - strand, within AO353_01540 at 328.749 kb on - strand, within AO353_01540 at 328.780 kb on - strand, within AO353_01540 at 328.780 kb on - strand, within AO353_01540 at 328.836 kb on - strand, within AO353_01540 at 328.836 kb on - strand, within AO353_01540 at 328.836 kb on - strand, within AO353_01540 at 328.863 kb on + strand, within AO353_01540 at 328.864 kb on - strand, within AO353_01540 at 328.864 kb on - strand, within AO353_01540 at 328.864 kb on - strand, within AO353_01540 at 328.864 kb on - strand, within AO353_01540 at 328.949 kb on + strand, within AO353_01540 at 328.949 kb on + strand, within AO353_01540 at 328.949 kb on + strand, within AO353_01540 at 328.949 kb on + strand, within AO353_01540 at 328.949 kb on + strand, within AO353_01540 at 328.949 kb on + strand, within AO353_01540 at 328.950 kb on - strand, within AO353_01540 at 328.950 kb on - strand, within AO353_01540 at 328.950 kb on - strand, within AO353_01540 at 328.950 kb on - strand, within AO353_01540 at 329.109 kb on + strand, within AO353_01540 at 329.143 kb on - strand at 329.216 kb on + strand at 329.216 kb on + strand at 329.216 kb on + strand at 329.216 kb on + strand at 329.219 kb on + strand at 329.220 kb on - strand at 329.220 kb on - strand at 329.220 kb on - strand at 329.220 kb on - strand at 329.229 kb on + strand at 329.238 kb on + strand at 329.268 kb on - strand at 329.306 kb on + strand at 329.306 kb on + strand at 329.306 kb on + strand at 329.306 kb on + strand at 329.306 kb on + strand at 329.307 kb on - strand at 329.307 kb on - strand at 329.307 kb on - strand at 329.307 kb on - strand at 329.307 kb on - strand at 329.307 kb on - strand at 329.307 kb on - strand at 329.316 kb on - strand at 329.316 kb on - strand at 329.353 kb on + strand at 329.353 kb on + strand at 329.354 kb on - strand at 329.354 kb on - strand at 329.367 kb on + strand at 329.367 kb on + strand at 329.368 kb on - strand at 329.368 kb on - strand at 329.368 kb on - strand at 329.374 kb on - strand at 329.374 kb on - strand at 329.377 kb on + strand at 329.378 kb on - strand at 329.378 kb on - strand at 329.378 kb on - strand at 329.385 kb on + strand at 329.434 kb on + strand at 329.434 kb on + strand at 329.434 kb on + strand at 329.435 kb on - strand at 329.541 kb on + strand at 329.542 kb on - strand at 329.542 kb on - strand at 329.590 kb on - strand at 329.674 kb on - strand at 329.674 kb on - strand at 329.702 kb on + strand at 329.702 kb on + strand at 329.702 kb on + strand at 329.702 kb on + strand at 329.702 kb on + strand at 329.702 kb on + strand at 329.703 kb on - strand at 329.703 kb on - strand at 329.727 kb on - strand at 329.786 kb on + strand at 329.786 kb on + strand at 329.786 kb on + strand at 329.787 kb on - strand at 329.787 kb on - strand at 329.787 kb on - strand at 329.787 kb on - strand at 329.794 kb on + strand at 329.794 kb on + strand at 329.795 kb on - strand at 329.878 kb on + strand at 329.879 kb on - strand at 329.879 kb on - strand at 329.879 kb on - strand at 329.879 kb on - strand at 329.879 kb on - strand at 329.879 kb on - strand at 329.880 kb on + strand at 329.908 kb on + strand at 329.979 kb on + strand at 330.003 kb on + strand at 330.004 kb on - strand at 330.004 kb on - strand at 330.012 kb on + strand at 330.012 kb on + strand at 330.012 kb on + strand at 330.013 kb on - strand at 330.013 kb on - strand at 330.013 kb on - strand at 330.013 kb on - strand at 330.038 kb on + strand at 330.038 kb on + strand at 330.038 kb on + strand at 330.038 kb on + strand at 330.038 kb on + strand at 330.038 kb on + strand at 330.039 kb on - strand at 330.039 kb on - strand at 330.039 kb on - strand at 330.039 kb on - strand at 330.039 kb on - strand at 330.039 kb on - strand at 330.070 kb on + strand at 330.070 kb on + strand at 330.071 kb on - strand at 330.086 kb on - strand at 330.086 kb on - strand at 330.170 kb on + strand at 330.170 kb on + strand at 330.190 kb on - strand at 330.190 kb on - strand at 330.190 kb on - strand at 330.197 kb on + strand at 330.197 kb on + strand at 330.198 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 327,439 + AO353_01530 0.70 +1.1 327,439 + AO353_01530 0.70 +2.9 327,439 + AO353_01530 0.70 -0.1 327,439 + AO353_01530 0.70 +1.9 327,439 + AO353_01530 0.70 +1.2 327,439 + AO353_01530 0.70 -2.1 327,439 + AO353_01530 0.70 +1.5 327,439 + AO353_01530 0.70 -0.1 327,463 + AO353_01530 0.73 +0.9 327,463 + AO353_01530 0.73 -0.1 327,463 + AO353_01530 0.73 +0.9 327,463 + AO353_01530 0.73 +0.8 327,463 + AO353_01530 0.73 +0.9 327,463 + AO353_01530 0.73 +0.9 327,469 + AO353_01530 0.74 -0.1 327,469 + AO353_01530 0.74 -0.1 327,489 + AO353_01530 0.77 -0.4 327,489 + AO353_01530 0.77 +0.2 327,489 + AO353_01530 0.77 -2.1 327,490 - AO353_01530 0.77 +0.3 327,490 - AO353_01530 0.77 -0.4 327,490 - AO353_01530 0.77 -0.5 327,490 - AO353_01530 0.77 -1.7 327,490 - AO353_01530 0.77 -0.5 327,490 - AO353_01530 0.77 -0.8 327,493 + AO353_01530 0.77 -1.7 327,493 + AO353_01530 0.77 +1.6 327,493 + AO353_01530 0.77 +0.5 327,493 + AO353_01530 0.77 +0.5 327,493 + AO353_01530 0.77 +2.2 327,494 - AO353_01530 0.77 +0.7 327,494 - AO353_01530 0.77 -1.2 327,611 + +1.3 327,611 + +1.2 327,612 - -1.3 327,613 + -1.1 327,613 + -0.1 327,614 - +1.7 327,614 - +2.5 327,614 - -0.1 327,614 - +0.7 327,614 - +0.3 327,631 + -0.7 327,643 - -2.1 327,643 - -0.4 327,656 + +1.3 327,656 + +0.1 327,656 + -1.5 327,656 + +0.8 327,656 + -0.7 327,657 - +1.1 327,657 - +0.2 327,657 - +0.7 327,681 + +0.9 327,682 - -0.4 327,708 + -1.1 327,708 + +2.2 327,708 + -0.5 327,708 + -1.1 327,708 + +0.7 327,708 + +0.7 327,708 + +1.9 327,708 + +0.9 327,708 + -0.1 327,709 - -0.1 327,709 - -0.7 327,709 - -0.1 327,709 - -0.1 327,709 - -0.1 327,709 - -1.1 327,709 - -0.1 327,735 + AO353_01535 0.12 +1.2 327,735 + AO353_01535 0.12 +0.3 327,735 + AO353_01535 0.12 -0.7 327,735 + AO353_01535 0.12 +1.1 327,736 - AO353_01535 0.12 -0.5 327,736 - AO353_01535 0.12 -1.1 327,736 - AO353_01535 0.12 +1.9 327,736 - AO353_01535 0.12 -0.1 327,736 - AO353_01535 0.12 -0.8 327,736 - AO353_01535 0.12 +0.5 327,774 + AO353_01535 0.17 +0.9 327,775 - AO353_01535 0.17 -1.4 327,784 + AO353_01535 0.18 +0.2 327,869 - AO353_01535 0.30 +2.2 327,948 + AO353_01535 0.41 +1.3 328,017 + AO353_01535 0.50 -0.1 328,017 + AO353_01535 0.50 +0.2 328,018 - AO353_01535 0.50 -0.1 328,018 - AO353_01535 0.50 -0.7 328,018 - AO353_01535 0.50 +0.9 328,018 - AO353_01535 0.50 +0.3 328,026 + AO353_01535 0.52 +1.6 328,026 + AO353_01535 0.52 -1.1 328,026 + AO353_01535 0.52 +0.3 328,077 + AO353_01535 0.59 +0.3 328,077 + AO353_01535 0.59 +0.5 328,077 + AO353_01535 0.59 -0.5 328,077 + AO353_01535 0.59 +0.9 328,077 + AO353_01535 0.59 -0.4 328,077 + AO353_01535 0.59 +0.4 328,078 - AO353_01535 0.59 +1.5 328,078 - AO353_01535 0.59 -1.7 328,078 - AO353_01535 0.59 +1.9 328,182 + AO353_01535 0.73 +1.1 328,182 + AO353_01535 0.73 +1.5 328,182 + AO353_01535 0.73 -0.8 328,183 - AO353_01535 0.73 +0.9 328,183 - AO353_01535 0.73 -0.4 328,274 + AO353_01535 0.86 +0.1 328,275 - AO353_01535 0.86 +0.5 328,280 + AO353_01535 0.86 -0.5 328,378 + +1.5 328,378 + +1.2 328,378 + -0.1 328,378 + +2.4 328,378 + -0.7 328,378 + +0.9 328,378 + +0.3 328,378 + +0.5 328,378 + +0.9 328,379 - -1.1 328,392 - -0.1 328,392 - +0.9 328,392 - -2.1 328,392 - +0.9 328,392 - -0.8 328,392 - +0.3 328,400 - +1.5 328,437 + -0.4 328,437 + +1.7 328,437 + -1.5 328,437 + +0.9 328,437 + -0.1 328,437 + -0.5 328,437 + -0.4 328,437 + +1.2 328,437 + -1.1 328,437 + -0.1 328,437 + +0.6 328,438 - -1.7 328,438 - -0.5 328,438 - -0.1 328,438 - +0.4 328,438 - -1.1 328,438 - -0.1 328,438 - +0.7 328,449 + +2.2 328,450 - +0.9 328,450 - -1.1 328,491 + +0.3 328,491 + +1.5 328,492 - -0.8 328,492 - -0.1 328,492 - -1.7 328,492 - -0.1 328,492 - +0.2 328,492 - +2.1 328,621 - AO353_01540 0.24 +0.1 328,713 + AO353_01540 0.36 -0.7 328,713 + AO353_01540 0.36 -1.2 328,734 + AO353_01540 0.38 +0.7 328,734 + AO353_01540 0.38 -1.3 328,735 - AO353_01540 0.38 +0.7 328,735 - AO353_01540 0.38 +1.1 328,749 - AO353_01540 0.40 -0.1 328,780 - AO353_01540 0.44 -2.9 328,780 - AO353_01540 0.44 +1.7 328,836 - AO353_01540 0.51 +0.5 328,836 - AO353_01540 0.51 -0.7 328,836 - AO353_01540 0.51 -0.1 328,863 + AO353_01540 0.55 -0.5 328,864 - AO353_01540 0.55 -0.3 328,864 - AO353_01540 0.55 -0.1 328,864 - AO353_01540 0.55 -2.1 328,864 - AO353_01540 0.55 -1.1 328,949 + AO353_01540 0.66 +0.9 328,949 + AO353_01540 0.66 -0.7 328,949 + AO353_01540 0.66 -1.1 328,949 + AO353_01540 0.66 +0.5 328,949 + AO353_01540 0.66 -0.1 328,949 + AO353_01540 0.66 +0.2 328,950 - AO353_01540 0.66 -1.1 328,950 - AO353_01540 0.66 -0.5 328,950 - AO353_01540 0.66 -0.5 328,950 - AO353_01540 0.66 -1.7 329,109 + AO353_01540 0.86 -0.7 329,143 - -0.7 329,216 + -0.7 329,216 + -0.5 329,216 + +1.2 329,216 + -1.1 329,219 + +1.2 329,220 - -0.5 329,220 - -1.1 329,220 - +2.2 329,220 - -0.7 329,229 + +0.3 329,238 + +0.6 329,268 - +1.2 329,306 + +1.5 329,306 + +0.7 329,306 + -0.7 329,306 + -0.3 329,306 + +1.2 329,307 - -0.7 329,307 - +1.7 329,307 - -1.4 329,307 - -1.1 329,307 - -0.1 329,307 - -1.7 329,307 - +0.9 329,316 - -1.3 329,316 - -0.1 329,353 + +1.5 329,353 + -0.5 329,354 - -1.1 329,354 - +1.9 329,367 + -2.1 329,367 + -0.1 329,368 - -0.5 329,368 - -1.2 329,368 - +1.9 329,374 - +0.9 329,374 - +1.5 329,377 + +1.5 329,378 - -0.7 329,378 - -0.7 329,378 - -0.1 329,385 + -0.7 329,434 + -1.1 329,434 + -0.1 329,434 + -0.1 329,435 - +1.2 329,541 + -0.1 329,542 - -0.1 329,542 - -0.4 329,590 - -1.7 329,674 - +0.5 329,674 - +0.8 329,702 + -0.1 329,702 + -0.1 329,702 + -1.4 329,702 + -0.2 329,702 + +0.7 329,702 + +1.1 329,703 - -0.8 329,703 - +0.5 329,727 - -0.1 329,786 + -0.1 329,786 + -0.1 329,786 + -0.1 329,787 - +1.5 329,787 - -0.1 329,787 - +0.1 329,787 - +1.5 329,794 + -2.1 329,794 + +0.3 329,795 - +0.9 329,878 + +0.7 329,879 - -0.5 329,879 - +1.7 329,879 - -1.4 329,879 - +0.2 329,879 - +1.3 329,879 - -0.3 329,880 + +1.7 329,908 + -0.1 329,979 + -1.1 330,003 + -0.5 330,004 - -0.4 330,004 - -0.1 330,012 + +1.1 330,012 + -0.1 330,012 + -0.1 330,013 - +1.6 330,013 - -0.3 330,013 - -0.5 330,013 - +0.6 330,038 + +0.5 330,038 + -2.4 330,038 + +2.5 330,038 + +0.7 330,038 + +1.6 330,038 + -0.1 330,039 - -1.1 330,039 - +0.9 330,039 - +0.5 330,039 - +1.5 330,039 - +2.2 330,039 - +0.3 330,070 + -0.8 330,070 + +0.7 330,071 - -0.1 330,086 - -0.5 330,086 - -0.8 330,170 + -0.7 330,170 + +0.5 330,190 - +0.2 330,190 - -0.8 330,190 - -0.1 330,197 + -1.1 330,197 + +2.2 330,198 - -1.1
Or see this region's nucleotide sequence