Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00695 and AO353_00700 are separated by 490 nucleotides AO353_00700 and AO353_00705 are separated by 136 nucleotides AO353_00705 and AO353_00710 are separated by 416 nucleotides
AO353_00695: AO353_00695 - diguanylate cyclase, at 147,342 to 149,042
_00695
AO353_00700: AO353_00700 - Cro/Cl family transcriptional regulator, at 149,533 to 149,847
_00700
AO353_00705: AO353_00705 - drug:proton antiporter, at 149,984 to 150,352
_00705
AO353_00710: AO353_00710 - aromatic ring-opening dioxygenase LigA, at 150,769 to 153,126
_00710
Position (kb) 149
150 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 148.588 kb on + strand, within AO353_00695 at 148.621 kb on + strand, within AO353_00695 at 148.622 kb on - strand, within AO353_00695 at 148.622 kb on - strand, within AO353_00695 at 148.622 kb on - strand, within AO353_00695 at 148.622 kb on - strand, within AO353_00695 at 148.622 kb on - strand, within AO353_00695 at 148.723 kb on + strand, within AO353_00695 at 148.934 kb on - strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.966 kb on + strand at 148.967 kb on - strand at 148.967 kb on - strand at 148.967 kb on - strand at 148.967 kb on - strand at 148.970 kb on + strand at 148.970 kb on + strand at 148.970 kb on + strand at 148.970 kb on + strand at 148.970 kb on + strand at 148.970 kb on + strand at 148.971 kb on - strand at 148.971 kb on - strand at 148.971 kb on - strand at 148.971 kb on - strand at 148.971 kb on - strand at 148.971 kb on - strand at 149.016 kb on + strand at 149.016 kb on + strand at 149.016 kb on + strand at 149.017 kb on - strand at 149.017 kb on - strand at 149.017 kb on - strand at 149.029 kb on + strand at 149.030 kb on - strand at 149.071 kb on + strand at 149.171 kb on + strand at 149.171 kb on + strand at 149.171 kb on + strand at 149.172 kb on - strand at 149.254 kb on + strand at 149.254 kb on + strand at 149.254 kb on + strand at 149.255 kb on - strand at 149.255 kb on - strand at 149.271 kb on + strand at 149.390 kb on + strand at 149.390 kb on + strand at 149.390 kb on + strand at 149.390 kb on + strand at 149.390 kb on + strand at 149.390 kb on + strand at 149.391 kb on - strand at 149.416 kb on + strand at 149.416 kb on + strand at 149.432 kb on + strand at 149.433 kb on - strand at 149.440 kb on - strand at 149.440 kb on - strand at 149.589 kb on + strand, within AO353_00700 at 149.589 kb on + strand, within AO353_00700 at 149.590 kb on - strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.659 kb on + strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.660 kb on - strand, within AO353_00700 at 149.761 kb on + strand, within AO353_00700 at 149.762 kb on - strand, within AO353_00700 at 149.762 kb on - strand, within AO353_00700 at 149.777 kb on + strand, within AO353_00700 at 149.778 kb on - strand, within AO353_00700 at 149.778 kb on - strand, within AO353_00700 at 149.778 kb on - strand, within AO353_00700 at 149.877 kb on + strand at 149.877 kb on + strand at 149.877 kb on + strand at 149.888 kb on + strand at 149.889 kb on - strand at 149.889 kb on - strand at 149.889 kb on - strand at 149.889 kb on - strand at 149.889 kb on - strand at 149.916 kb on + strand at 149.916 kb on + strand at 149.916 kb on + strand at 149.946 kb on - strand at 149.999 kb on + strand at 149.999 kb on + strand at 149.999 kb on + strand at 149.999 kb on + strand at 149.999 kb on + strand at 149.999 kb on + strand at 150.000 kb on - strand at 150.000 kb on - strand at 150.000 kb on - strand at 150.000 kb on - strand at 150.011 kb on + strand at 150.011 kb on + strand at 150.012 kb on - strand at 150.044 kb on + strand, within AO353_00705 at 150.044 kb on + strand, within AO353_00705 at 150.044 kb on + strand, within AO353_00705 at 150.044 kb on + strand, within AO353_00705 at 150.044 kb on + strand, within AO353_00705 at 150.044 kb on + strand, within AO353_00705 at 150.044 kb on + strand, within AO353_00705 at 150.044 kb on + strand, within AO353_00705 at 150.045 kb on - strand, within AO353_00705 at 150.045 kb on - strand, within AO353_00705 at 150.079 kb on - strand, within AO353_00705 at 150.079 kb on - strand, within AO353_00705 at 150.117 kb on + strand, within AO353_00705 at 150.117 kb on + strand, within AO353_00705 at 150.118 kb on - strand, within AO353_00705 at 150.118 kb on - strand, within AO353_00705 at 150.227 kb on + strand, within AO353_00705 at 150.227 kb on + strand, within AO353_00705 at 150.227 kb on + strand, within AO353_00705 at 150.227 kb on + strand, within AO353_00705 at 150.227 kb on + strand, within AO353_00705 at 150.227 kb on + strand, within AO353_00705 at 150.228 kb on - strand, within AO353_00705 at 150.228 kb on - strand, within AO353_00705 at 150.228 kb on - strand, within AO353_00705 at 150.228 kb on - strand, within AO353_00705 at 150.228 kb on - strand, within AO353_00705 at 150.651 kb on - strand at 150.658 kb on - strand at 150.704 kb on + strand at 150.716 kb on + strand at 150.716 kb on + strand at 150.717 kb on - strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.724 kb on + strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand at 150.725 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 148,588 + AO353_00695 0.73 -1.7 148,621 + AO353_00695 0.75 -0.9 148,622 - AO353_00695 0.75 +2.7 148,622 - AO353_00695 0.75 -0.9 148,622 - AO353_00695 0.75 -0.1 148,622 - AO353_00695 0.75 +1.5 148,622 - AO353_00695 0.75 +0.5 148,723 + AO353_00695 0.81 +1.2 148,934 - -0.9 148,966 + -0.1 148,966 + -0.9 148,966 + -1.5 148,966 + -1.1 148,966 + -0.1 148,966 + -1.1 148,966 + -2.1 148,966 + +1.3 148,966 + +0.5 148,966 + +0.4 148,967 - +0.5 148,967 - -0.1 148,967 - +0.9 148,967 - +1.1 148,970 + +1.9 148,970 + +1.5 148,970 + +0.6 148,970 + -1.4 148,970 + -0.5 148,970 + -1.1 148,971 - -0.5 148,971 - +0.5 148,971 - -0.9 148,971 - +0.5 148,971 - -0.9 148,971 - -0.1 149,016 + +0.6 149,016 + -0.1 149,016 + +0.5 149,017 - -1.4 149,017 - -2.5 149,017 - +0.9 149,029 + +2.2 149,030 - -0.1 149,071 + -1.7 149,171 + -0.1 149,171 + +0.5 149,171 + +0.2 149,172 - +1.7 149,254 + +1.0 149,254 + +1.7 149,254 + +0.9 149,255 - -2.5 149,255 - -0.5 149,271 + -0.5 149,390 + +0.2 149,390 + +0.2 149,390 + -2.1 149,390 + +1.5 149,390 + +0.0 149,390 + -0.9 149,391 - -1.1 149,416 + +0.9 149,416 + +0.9 149,432 + -0.1 149,433 - -0.1 149,440 - -1.1 149,440 - +1.9 149,589 + AO353_00700 0.18 +1.1 149,589 + AO353_00700 0.18 -0.1 149,590 - AO353_00700 0.18 -1.1 149,659 + AO353_00700 0.40 -2.5 149,659 + AO353_00700 0.40 -1.0 149,659 + AO353_00700 0.40 +0.3 149,659 + AO353_00700 0.40 -0.1 149,659 + AO353_00700 0.40 -1.5 149,659 + AO353_00700 0.40 -1.1 149,659 + AO353_00700 0.40 +0.5 149,659 + AO353_00700 0.40 -1.1 149,659 + AO353_00700 0.40 -1.9 149,659 + AO353_00700 0.40 -0.1 149,659 + AO353_00700 0.40 +1.9 149,659 + AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 -1.1 149,660 - AO353_00700 0.40 -2.7 149,660 - AO353_00700 0.40 -1.7 149,660 - AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 -1.7 149,660 - AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 -1.7 149,660 - AO353_00700 0.40 -2.1 149,660 - AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 -0.1 149,660 - AO353_00700 0.40 +1.5 149,660 - AO353_00700 0.40 -2.1 149,660 - AO353_00700 0.40 -1.7 149,660 - AO353_00700 0.40 -0.5 149,660 - AO353_00700 0.40 -0.5 149,761 + AO353_00700 0.72 -1.1 149,762 - AO353_00700 0.73 -0.1 149,762 - AO353_00700 0.73 -2.5 149,777 + AO353_00700 0.77 -0.1 149,778 - AO353_00700 0.78 -1.1 149,778 - AO353_00700 0.78 -2.3 149,778 - AO353_00700 0.78 -0.1 149,877 + -1.1 149,877 + +0.1 149,877 + +0.5 149,888 + +1.7 149,889 - -1.4 149,889 - -0.5 149,889 - -1.1 149,889 - -1.5 149,889 - -1.1 149,916 + -0.1 149,916 + -0.4 149,916 + -2.9 149,946 - -0.4 149,999 + +0.6 149,999 + -0.1 149,999 + -0.4 149,999 + +0.9 149,999 + -0.1 149,999 + -1.1 150,000 - +0.1 150,000 - +0.6 150,000 - +0.0 150,000 - +1.5 150,011 + +0.5 150,011 + +0.7 150,012 - -1.3 150,044 + AO353_00705 0.16 -0.5 150,044 + AO353_00705 0.16 +1.5 150,044 + AO353_00705 0.16 -0.1 150,044 + AO353_00705 0.16 +0.9 150,044 + AO353_00705 0.16 +1.8 150,044 + AO353_00705 0.16 +0.9 150,044 + AO353_00705 0.16 +0.9 150,044 + AO353_00705 0.16 +0.5 150,045 - AO353_00705 0.17 +1.2 150,045 - AO353_00705 0.17 -1.1 150,079 - AO353_00705 0.26 +1.5 150,079 - AO353_00705 0.26 -1.1 150,117 + AO353_00705 0.36 -0.1 150,117 + AO353_00705 0.36 +0.5 150,118 - AO353_00705 0.36 -0.1 150,118 - AO353_00705 0.36 +0.6 150,227 + AO353_00705 0.66 +2.5 150,227 + AO353_00705 0.66 +1.5 150,227 + AO353_00705 0.66 +0.5 150,227 + AO353_00705 0.66 +1.9 150,227 + AO353_00705 0.66 -0.7 150,227 + AO353_00705 0.66 -0.1 150,228 - AO353_00705 0.66 -1.1 150,228 - AO353_00705 0.66 +1.1 150,228 - AO353_00705 0.66 -0.7 150,228 - AO353_00705 0.66 -1.4 150,228 - AO353_00705 0.66 -0.5 150,651 - +0.5 150,658 - -1.0 150,704 + -0.1 150,716 + +0.5 150,716 + +0.2 150,717 - -0.1 150,724 + -0.4 150,724 + -0.9 150,724 + +0.9 150,724 + -0.1 150,724 + -0.1 150,724 + +1.7 150,724 + -0.5 150,724 + -1.4 150,724 + +0.9 150,724 + +2.2 150,724 + -0.5 150,724 + -1.1 150,724 + -0.5 150,724 + +0.6 150,724 + -1.5 150,724 + -2.1 150,725 - +1.5 150,725 - +0.5 150,725 - +0.3 150,725 - +2.2 150,725 - +0.9 150,725 - +2.2 150,725 - -1.1 150,725 - +0.5 150,725 - +0.5 150,725 - -1.7 150,725 - +1.5 150,725 - +0.2 150,725 - +0.5 150,725 - +2.5 150,725 - -2.1 150,725 - -0.7 150,725 - -1.7 150,725 - +1.6 150,725 - +0.9 150,725 - +0.9 150,725 - +0.7 150,725 - -0.7 150,725 - -0.9 150,725 - -2.1 150,725 - -2.7 150,725 - +0.2
Or see this region's nucleotide sequence