Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00550 and AO353_00555 are separated by 48 nucleotides AO353_00555 and AO353_00560 are separated by 200 nucleotides AO353_00560 and AO353_00565 are separated by 222 nucleotides
AO353_00550: AO353_00550 - MATE family efflux transporter, at 114,927 to 116,336
_00550
AO353_00555: AO353_00555 - sulfurtransferase, at 116,385 to 116,636
_00555
AO353_00560: AO353_00560 - 23S rRNA methyltransferase, at 116,837 to 117,910
_00560
AO353_00565: AO353_00565 - aconitate hydratase, at 118,133 to 120,883
_00565
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 115.876 kb on + strand, within AO353_00550 at 115.877 kb on - strand, within AO353_00550 at 115.998 kb on + strand, within AO353_00550 at 115.998 kb on + strand, within AO353_00550 at 116.046 kb on + strand, within AO353_00550 at 116.047 kb on - strand, within AO353_00550 at 116.058 kb on + strand, within AO353_00550 at 116.059 kb on - strand, within AO353_00550 at 116.152 kb on - strand, within AO353_00550 at 116.178 kb on + strand, within AO353_00550 at 116.178 kb on + strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.179 kb on - strand, within AO353_00550 at 116.335 kb on - strand at 116.335 kb on - strand at 116.743 kb on + strand at 116.743 kb on + strand at 116.743 kb on + strand at 116.744 kb on - strand at 116.744 kb on - strand at 116.744 kb on - strand at 116.858 kb on + strand at 116.858 kb on + strand at 116.859 kb on - strand at 116.859 kb on - strand at 116.904 kb on + strand at 116.904 kb on + strand at 116.905 kb on - strand at 116.905 kb on - strand at 116.905 kb on - strand at 116.992 kb on - strand, within AO353_00560 at 116.992 kb on - strand, within AO353_00560 at 116.992 kb on - strand, within AO353_00560 at 117.139 kb on + strand, within AO353_00560 at 117.139 kb on + strand, within AO353_00560 at 117.140 kb on - strand, within AO353_00560 at 117.140 kb on - strand, within AO353_00560 at 117.140 kb on - strand, within AO353_00560 at 117.403 kb on + strand, within AO353_00560 at 117.427 kb on + strand, within AO353_00560 at 117.427 kb on + strand, within AO353_00560 at 117.427 kb on + strand, within AO353_00560 at 117.428 kb on - strand, within AO353_00560 at 117.428 kb on - strand, within AO353_00560 at 117.428 kb on - strand, within AO353_00560 at 117.592 kb on + strand, within AO353_00560 at 117.611 kb on + strand, within AO353_00560 at 117.612 kb on - strand, within AO353_00560 at 117.612 kb on - strand, within AO353_00560 at 117.817 kb on - strand at 117.895 kb on + strand at 117.895 kb on + strand at 117.895 kb on + strand at 117.896 kb on - strand at 117.896 kb on - strand at 117.896 kb on - strand at 117.914 kb on + strand at 117.914 kb on + strand at 117.914 kb on + strand at 117.914 kb on + strand at 117.915 kb on - strand at 118.003 kb on + strand at 118.047 kb on + strand at 118.047 kb on + strand at 118.048 kb on - strand at 118.048 kb on - strand at 118.053 kb on + strand at 118.053 kb on + strand at 118.053 kb on + strand at 118.054 kb on - strand at 118.054 kb on - strand at 118.054 kb on - strand at 118.070 kb on + strand at 118.070 kb on + strand at 118.071 kb on - strand at 118.075 kb on + strand at 118.076 kb on - strand at 118.162 kb on + strand at 118.162 kb on + strand at 118.163 kb on - strand at 118.163 kb on - strand at 118.163 kb on - strand at 118.176 kb on + strand at 118.177 kb on - strand at 118.190 kb on + strand at 118.191 kb on - strand at 118.191 kb on - strand at 118.191 kb on - strand at 118.191 kb on - strand at 118.191 kb on - strand at 118.196 kb on + strand at 118.196 kb on + strand at 118.196 kb on + strand at 118.197 kb on - strand at 118.197 kb on - strand at 118.197 kb on - strand at 118.197 kb on - strand at 118.588 kb on + strand, within AO353_00565 at 118.589 kb on - strand, within AO353_00565 at 118.589 kb on - strand, within AO353_00565 at 118.602 kb on - strand, within AO353_00565 at 118.602 kb on - strand, within AO353_00565 at 118.691 kb on + strand, within AO353_00565 at 118.691 kb on + strand, within AO353_00565 at 118.691 kb on + strand, within AO353_00565 at 118.691 kb on + strand, within AO353_00565 at 118.691 kb on + strand, within AO353_00565 at 118.692 kb on - strand, within AO353_00565 at 118.692 kb on - strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.736 kb on + strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.737 kb on - strand, within AO353_00565 at 118.800 kb on + strand, within AO353_00565 at 118.801 kb on - strand, within AO353_00565 at 118.801 kb on - strand, within AO353_00565
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 115,876 + AO353_00550 0.67 +2.7 115,877 - AO353_00550 0.67 -0.9 115,998 + AO353_00550 0.76 +0.9 115,998 + AO353_00550 0.76 +0.9 116,046 + AO353_00550 0.79 +0.5 116,047 - AO353_00550 0.79 -0.1 116,058 + AO353_00550 0.80 -0.5 116,059 - AO353_00550 0.80 +2.6 116,152 - AO353_00550 0.87 +0.3 116,178 + AO353_00550 0.89 +0.5 116,178 + AO353_00550 0.89 +0.9 116,179 - AO353_00550 0.89 +1.5 116,179 - AO353_00550 0.89 +0.3 116,179 - AO353_00550 0.89 +0.5 116,179 - AO353_00550 0.89 -0.1 116,335 - -1.5 116,335 - +1.5 116,743 + +0.5 116,743 + +0.4 116,743 + +0.5 116,744 - -0.5 116,744 - -0.1 116,744 - +0.9 116,858 + +0.9 116,858 + +1.1 116,859 - +0.5 116,859 - -2.3 116,904 + +1.6 116,904 + +0.5 116,905 - +1.5 116,905 - -0.5 116,905 - -0.5 116,992 - AO353_00560 0.14 +0.9 116,992 - AO353_00560 0.14 +0.1 116,992 - AO353_00560 0.14 -0.1 117,139 + AO353_00560 0.28 +0.9 117,139 + AO353_00560 0.28 +0.1 117,140 - AO353_00560 0.28 +0.5 117,140 - AO353_00560 0.28 -0.5 117,140 - AO353_00560 0.28 -1.1 117,403 + AO353_00560 0.53 -0.1 117,427 + AO353_00560 0.55 +0.5 117,427 + AO353_00560 0.55 +1.5 117,427 + AO353_00560 0.55 +1.2 117,428 - AO353_00560 0.55 +6.8 117,428 - AO353_00560 0.55 +0.6 117,428 - AO353_00560 0.55 -0.9 117,592 + AO353_00560 0.70 -1.5 117,611 + AO353_00560 0.72 -2.7 117,612 - AO353_00560 0.72 -0.8 117,612 - AO353_00560 0.72 +0.5 117,817 - +1.5 117,895 + +0.7 117,895 + +1.0 117,895 + +0.5 117,896 - +0.3 117,896 - +0.5 117,896 - +0.6 117,914 + -2.1 117,914 + -0.1 117,914 + +1.1 117,914 + -0.1 117,915 - +3.0 118,003 + +2.2 118,047 + -1.7 118,047 + -0.5 118,048 - +0.5 118,048 - -0.1 118,053 + +0.9 118,053 + -2.1 118,053 + +1.2 118,054 - +1.6 118,054 - +0.3 118,054 - -0.4 118,070 + -0.1 118,070 + -0.1 118,071 - -0.1 118,075 + +1.5 118,076 - +0.5 118,162 + -1.1 118,162 + +0.6 118,163 - -1.1 118,163 - +2.2 118,163 - -1.1 118,176 + +1.1 118,177 - -1.1 118,190 + -0.1 118,191 - +0.1 118,191 - +0.9 118,191 - -0.1 118,191 - +1.1 118,191 - +1.9 118,196 + -1.1 118,196 + -1.7 118,196 + -1.5 118,197 - +2.5 118,197 - +0.1 118,197 - +0.1 118,197 - +0.9 118,588 + AO353_00565 0.17 +1.2 118,589 - AO353_00565 0.17 +0.0 118,589 - AO353_00565 0.17 -0.1 118,602 - AO353_00565 0.17 -1.1 118,602 - AO353_00565 0.17 +0.6 118,691 + AO353_00565 0.20 -0.1 118,691 + AO353_00565 0.20 -2.1 118,691 + AO353_00565 0.20 -0.3 118,691 + AO353_00565 0.20 -0.1 118,691 + AO353_00565 0.20 +0.5 118,692 - AO353_00565 0.20 -0.5 118,692 - AO353_00565 0.20 -0.9 118,736 + AO353_00565 0.22 -0.0 118,736 + AO353_00565 0.22 +0.9 118,736 + AO353_00565 0.22 -0.9 118,736 + AO353_00565 0.22 -0.1 118,736 + AO353_00565 0.22 +0.3 118,736 + AO353_00565 0.22 -1.1 118,736 + AO353_00565 0.22 +3.2 118,736 + AO353_00565 0.22 -0.1 118,736 + AO353_00565 0.22 -1.1 118,736 + AO353_00565 0.22 -0.7 118,736 + AO353_00565 0.22 -0.7 118,736 + AO353_00565 0.22 -0.1 118,736 + AO353_00565 0.22 +2.5 118,736 + AO353_00565 0.22 -1.4 118,737 - AO353_00565 0.22 +0.3 118,737 - AO353_00565 0.22 +1.9 118,737 - AO353_00565 0.22 +1.5 118,737 - AO353_00565 0.22 +0.1 118,737 - AO353_00565 0.22 +0.5 118,737 - AO353_00565 0.22 +0.4 118,737 - AO353_00565 0.22 -0.1 118,737 - AO353_00565 0.22 -0.8 118,800 + AO353_00565 0.24 -0.1 118,801 - AO353_00565 0.24 -1.1 118,801 - AO353_00565 0.24 -0.1
Or see this region's nucleotide sequence